Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt29m16
(755 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC15F9.02 |seh1||nucleoporin Seh1 |Schizosaccharomyces pombe|c... 150 2e-37
SPBC215.15 |sec13||COPII-coated vesicle component Sec13|Schizosa... 100 3e-22
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 46 4e-06
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 44 2e-05
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 43 4e-05
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 43 5e-05
SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 42 1e-04
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 40 5e-04
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 38 0.001
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 38 0.002
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 38 0.002
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 37 0.003
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 36 0.006
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 36 0.008
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 35 0.014
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 34 0.019
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 32 0.077
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 32 0.10
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 32 0.10
SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces pombe... 32 0.10
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 31 0.18
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 31 0.23
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 30 0.31
SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces pombe... 30 0.31
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 29 0.54
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 29 0.54
SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual 29 0.72
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 29 0.72
SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit S... 29 0.72
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 29 0.72
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 29 0.95
SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9 |Schizosacchar... 29 0.95
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 28 1.3
SPAC25H1.06 |||histone acetyltransferase complex subunit |Schizo... 28 1.7
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 27 2.2
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 27 2.2
SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyc... 27 2.2
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 27 2.9
SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate dehydrogenase|Sch... 27 2.9
SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr 2|... 27 2.9
SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inosito... 27 2.9
SPCC16C4.02c |||DUF1941 family protein|Schizosaccharomyces pombe... 27 2.9
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 27 3.8
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 27 3.8
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c... 27 3.8
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 27 3.8
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 26 5.0
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 26 5.0
SPAC1556.08c ||SPAC1F12.01c|protein kinase activator Snf4 |Schiz... 26 6.7
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 26 6.7
SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Ma... 26 6.7
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 25 8.8
SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr 2|||M... 25 8.8
>SPAC15F9.02 |seh1||nucleoporin Seh1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 150 bits (363), Expect = 2e-37
Identities = 77/180 (42%), Positives = 109/180 (60%), Gaps = 9/180 (5%)
Frame = +3
Query: 96 AQTIHADHKDLIHDVAYDFYGERMATCSSDQYVKIWD-TDGHGGWRMTASWKAHHGSVWK 272
A TI +H+DL++DV YDFYG RM +CS+DQ VK++D D W +T+ W+A S+ +
Sbjct: 6 ATTIQTNHQDLVNDVTYDFYGRRMVSCSADQRVKVYDFNDDTETWAITSEWRAGDASLMR 65
Query: 273 VTWAHPEFGQVIATCSFDRTAAIWEEVGDTTATGSEKSLRTWLKRSNLVDSRTSVTDVKF 452
V WAHP FGQV+A CS DR I+EE + +TW++ + L+D+R++V D+ F
Sbjct: 66 VAWAHPSFGQVLAVCSLDRGVRIYEEQKKNFES------KTWVEVAKLMDARSAVLDISF 119
Query: 453 GPKHLGLLLVTCSADGIIRIYEAPDVMNLAQWTLQHEI---PTKVSIS-----CLSWNPS 608
P G L SAD +RIYEA + NL WTL +EI P+ S + C++W PS
Sbjct: 120 CPFQHGCKLAAVSADATLRIYEAMEPGNLTYWTLMNEIALMPSPPSRNEQPAFCVNWCPS 179
Score = 29.5 bits (63), Expect = 0.54
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +3
Query: 174 CSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEFGQ---VIATCSFDRTAAIW 344
C +D Y I+ + HG W+ A H + + WA P G +IAT D I+
Sbjct: 190 CMNDAY--IYKQNSHGKWKKVAELPGHTDLIRDICWA-PSMGSSYYLIATACKDGNVRIF 246
Query: 345 E 347
+
Sbjct: 247 K 247
>SPBC215.15 |sec13||COPII-coated vesicle component
Sec13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 100 bits (239), Expect = 3e-22
Identities = 47/142 (33%), Positives = 75/142 (52%)
Frame = +3
Query: 102 TIHADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTW 281
T+ H D+IHD D+YG+R+ATCSSDQ +K++ + + + + + H G VW++ W
Sbjct: 3 TVDTQHDDMIHDAILDYYGKRLATCSSDQTIKVFSIE-NNQQTLLETLRGHSGPVWQLGW 61
Query: 282 AHPEFGQVIATCSFDRTAAIWEEVGDTTATGSEKSLRTWLKRSNLVDSRTSVTDVKFGPK 461
AHP+FG ++A+ S+D +W E G W + + + SV V + P
Sbjct: 62 AHPKFGTILASASYDGHVIVWRETGG-----------VWSELMDHTAHQASVNAVSWAPH 110
Query: 462 HLGLLLVTCSADGIIRIYEAPD 527
G LL S+DG + + E D
Sbjct: 111 EYGALLACASSDGKVSVLEFKD 132
Score = 35.5 bits (78), Expect = 0.008
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Frame = +3
Query: 111 ADHKDLIHDVAY----DFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSV-WKV 275
A H D DVA+ +A+ S D+ V IW +G G W+ T + + W+V
Sbjct: 202 AGHVDWTRDVAWAPSVGLTKTYLASASQDKNVFIWTKEGDGPWQKTPLTEEKFPDIAWRV 261
Query: 276 TWAHPEFGQVIATCSFDRTAAIWEE 350
+W+ G ++A D +++E
Sbjct: 262 SWSLS--GNILAVSCGDNKVYLFKE 284
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 46.4 bits (105), Expect = 4e-06
Identities = 28/105 (26%), Positives = 51/105 (48%)
Frame = +3
Query: 54 IITMSENIATNLFEAQTIHADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRM 233
+++++E I + +E H++ + +A+ G +ATCS D+ V IW+ +
Sbjct: 357 VVSINEKIDDD-WECTAALEGHENEVKCIAWSCNGNYLATCSRDKSVWIWEATEDDEFDC 415
Query: 234 TASWKAHHGSVWKVTWAHPEFGQVIATCSFDRTAAIWEEVGDTTA 368
A + H V VTW HP ++ + S+D + W + GD A
Sbjct: 416 LAVLQEHTQDVKVVTW-HPT-EDLLVSGSYDNSICFWRDDGDDWA 458
Score = 32.7 bits (71), Expect = 0.058
Identities = 34/166 (20%), Positives = 66/166 (39%), Gaps = 8/166 (4%)
Frame = +3
Query: 90 FEAQTIHADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVW 269
F+ + +H + V + + + + S D + W DG W +T + H +VW
Sbjct: 413 FDCLAVLQEHTQDVKVVTWHPTEDLLVSGSYDNSICFWRDDGDD-WALTCQLQGHTNTVW 471
Query: 270 KVTWAHPEFGQVIATCSFDRTAAIWEEVG---DTTATGSEKSLRTWLKRSNLVDSRTSVT 440
+ ++ P G +A+ D +W ++ D S LR L+ +TS+
Sbjct: 472 ALAFS-PN-GNTLASADNDGNVFLWIKISSNEDVATIDSTNILRPALQEE--WKQQTSLP 527
Query: 441 DVKFGPKHL-----GLLLVTCSADGIIRIYEAPDVMNLAQWTLQHE 563
+ G + L + DG I +Y+ + + A W + +E
Sbjct: 528 HIHKGAVYTISWMNDATLCSAGGDGKIVVYQR-EKHDEALWHVAYE 572
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 44.4 bits (100), Expect = 2e-05
Identities = 41/144 (28%), Positives = 59/144 (40%), Gaps = 5/144 (3%)
Frame = +3
Query: 237 ASWKAHHGSVWKVTWAHPEFGQVIATCSFDRTAAIWEEVGDTTATGSEKSLRTWLKRSNL 416
AS KAH +W +WA E G AT S D+ W ++ D +L+
Sbjct: 618 ASIKAHSRIIWDASWAPKEMGYFFATASRDKFVKFW-KINDNKKICDVAALQ-------- 668
Query: 417 VDSRTSVTDVKFGP--KHLGLLLVTCSADGIIRIYEAPDVMNLAQW---TLQHEIPTKVS 581
+VT V F P + LLL + G I I+ P NL +W L + S
Sbjct: 669 --FSDAVTAVDFAPFFHNDELLLAVGTEAGKIFIWRCPR-ENLTKWYPTRLPDHMAPMES 725
Query: 582 ISCLSWNPSLSRVGNPPMLAVGSD 653
I+ + W P+ +G +L G D
Sbjct: 726 INQILWKPTFETMGLYSLLIAGED 749
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 43.2 bits (97), Expect = 4e-05
Identities = 21/60 (35%), Positives = 35/60 (58%)
Frame = +3
Query: 168 ATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEFGQVIATCSFDRTAAIWE 347
A+CS+D +K+W +DG + + H V+ +T+ H + Q+IA+C DRT IW+
Sbjct: 190 ASCSNDGVIKLWTSDGEFLYEL----HGHTSFVYSLTYIHNQ--QLIASCGEDRTIRIWK 243
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 42.7 bits (96), Expect = 5e-05
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +3
Query: 117 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEF 296
H ++ + + + +CS D ++W D ++K H G VW V A F
Sbjct: 378 HSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTK---TALVAYKGHTGPVWDV--AFGPF 432
Query: 297 GQVIATCSFDRTAAIW 344
G AT S D+TA +W
Sbjct: 433 GHYFATASHDQTAQLW 448
Score = 40.3 bits (90), Expect = 3e-04
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Frame = +3
Query: 51 FIITMSENIATNLFEAQT-----IHADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDG 215
++++ SE+ + L+ T + H + DVA+ +G AT S DQ ++W D
Sbjct: 393 YLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDH 452
Query: 216 HGGWRMTASWKAHHGSVWKVTWAHPEFGQVIATCSFDRTAAIWE 347
R+ A H V VT+ HP V+ T S D+T +W+
Sbjct: 453 IYPLRVFA---GHLSDVDCVTF-HPNSAYVL-TGSSDKTCRLWD 491
>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
Prw1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 431
Score = 41.5 bits (93), Expect = 1e-04
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +3
Query: 111 ADHKDLIHDVAYDF-YGERMATCSSDQYVKIWDTDG-HGGWRMTASWKAHHGSVWKVTWA 284
+ H+ + DV + + + + +A+ S DQY+ + D + S AH G + V +
Sbjct: 231 SSHEKQVSDVRFHYKHQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAF- 289
Query: 285 HPEFGQVIATCSFDRTAAIWE 347
+P ++ATCS D+T A+W+
Sbjct: 290 NPHNDFILATCSTDKTIALWD 310
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 39.5 bits (88), Expect = 5e-04
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +3
Query: 159 ERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEFGQVIATCSFDRTAA 338
E + +CS D + ++W D + H+ +W V ++ FG AT S D+TA
Sbjct: 416 EFILSCSEDGFTRLWSKDTKS---TIVKYAGHNAPIWDVQFS--PFGYYFATASHDQTAR 470
Query: 339 IWE 347
+W+
Sbjct: 471 LWD 473
Score = 25.8 bits (54), Expect = 6.7
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +3
Query: 105 IHADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSV 266
+ H++ + V++ +AT SSD ++WD G R+ + AHH V
Sbjct: 482 VFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRV---FNAHHSPV 532
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 38.3 bits (85), Expect = 0.001
Identities = 25/71 (35%), Positives = 36/71 (50%)
Frame = +3
Query: 135 DVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEFGQVIAT 314
D++YD + + TCS+D+ VKIW D G S AH S+ +VT+ + T
Sbjct: 583 DISYD--SKLLVTCSADKNVKIWGLD-FGDCH--KSIFAHQDSIMEVTFQPDTYN--FFT 635
Query: 315 CSFDRTAAIWE 347
CS DR W+
Sbjct: 636 CSKDREVRYWD 646
Score = 37.9 bits (84), Expect = 0.002
Identities = 23/89 (25%), Positives = 38/89 (42%)
Frame = +3
Query: 117 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEF 296
H+D I +V + TCS D+ V+ WD + + + HH VW + P F
Sbjct: 617 HQDSIMEVTFQPDTYNFFTCSKDREVRYWDGK---SFDLILKLRGHHSEVWALA-VGPTF 672
Query: 297 GQVIATCSFDRTAAIWEEVGDTTATGSEK 383
+ + S D + +WE+ D E+
Sbjct: 673 ---VVSGSHDHSIRLWEQGDDLVFLEEER 698
Score = 26.2 bits (55), Expect = 5.0
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 117 HKDLIHDVAYDFYGERMATCSSDQYVKIWD 206
HK + + +D G R+A+ S D + +WD
Sbjct: 103 HKSAVTTMDFDKMGTRLASGSMDTDIIVWD 132
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 37.9 bits (84), Expect = 0.002
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Frame = +3
Query: 72 NIATNLFEAQT------IHADHKDLIHD-----VAYDFYGERMATCSSDQYVKIWDTDGH 218
N A N+F+ QT +H + D D +A+ G+ + T + D+ +K+WD
Sbjct: 333 NQAANVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQ 392
Query: 219 GGWRMTASWKAHHGSVWKVTWAHPEFGQVIATCSFDRTAAIWE 347
++ + H ++ + ++H G+ I + S DRTA +W+
Sbjct: 393 ---KVRYVFSGHEQDIYSLDFSHN--GRFIVSGSGDRTARLWD 430
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 37.9 bits (84), Expect = 0.002
Identities = 42/141 (29%), Positives = 61/141 (43%)
Frame = +3
Query: 165 MATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEFGQVIATCSFDRTAAIW 344
+AT SSD +KIW +R+ + H+ + +V WA + +A+ S D+T IW
Sbjct: 69 IATSSSDGTIKIWSA---LTFRLECTLFGHYRGISQVKWA--TGSKYLASASDDKTIRIW 123
Query: 345 EEVGDTTATGSEKSLRTWLKRSNLVDSRTSVTDVKFGPKHLGLLLVTCSADGIIRIYEAP 524
+ S+R +N V S + F P LG LLV+ S D +RI+
Sbjct: 124 D-------FEKRCSVRCLKGHTNYVSS------IDFNP--LGTLLVSGSWDETVRIWNLQ 168
Query: 525 DVMNLAQWTLQHEIPTKVSIS 587
D L E VSIS
Sbjct: 169 DGTCLRMLPAHSEPIISVSIS 189
Score = 29.1 bits (62), Expect = 0.72
Identities = 20/77 (25%), Positives = 36/77 (46%)
Frame = +3
Query: 117 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEF 296
H + + + ++ G + + S D+ V+IW+ RM AH + V+ +
Sbjct: 137 HTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLP---AHSEPIISVSISAD-- 191
Query: 297 GQVIATCSFDRTAAIWE 347
G + AT S+D A IW+
Sbjct: 192 GTLCATASYDGMARIWD 208
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 37.1 bits (82), Expect = 0.003
Identities = 23/77 (29%), Positives = 40/77 (51%)
Frame = +3
Query: 117 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEF 296
H ++DV Y ER A+ +D K++ DG G ++ AH GS++ ++W+ P+
Sbjct: 188 HSKFVYDVRYSPNDERFASAGADG--KVYVFDGKTGDQVYEI-DAHKGSIFSISWS-PDS 243
Query: 297 GQVIATCSFDRTAAIWE 347
Q + T S + IW+
Sbjct: 244 SQFV-TSSAGYSCKIWD 259
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 35.9 bits (79), Expect = 0.006
Identities = 32/134 (23%), Positives = 61/134 (45%)
Frame = +3
Query: 117 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEF 296
H+ L D+ YD + A+C D+++++WD + R A ++ + E
Sbjct: 57 HEILDLDLVYD--STKFASCGGDKFIQVWDVNTGKVDRRLGGHLAQINTI-----RYNED 109
Query: 297 GQVIATCSFDRTAAIWEEVGDTTATGSEKSLRTWLKRSNLVDSRTSVTDVKFGPKHLGLL 476
++A+ SFD +W+ + S ++ L D++ SV+ + +H L
Sbjct: 110 SSILASGSFDSKVRLWD-----CRSNSFSPIQV------LADAKDSVSSIDIA-EH---L 154
Query: 477 LVTCSADGIIRIYE 518
+VT S DG +R Y+
Sbjct: 155 IVTGSTDGTLRTYD 168
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 35.5 bits (78), Expect = 0.008
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +3
Query: 117 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPE 293
H D + D+ G + T SSD +K+W + S+ AH SVW + HP+
Sbjct: 215 HTDNVRDILISDDGRTILTASSDATIKLWSLRAQ---KCLFSFIAHSDSVWALYSEHPD 270
Score = 29.1 bits (62), Expect = 0.72
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 117 HKDLIHDVAYDFYGERMATCSSDQYVKIW 203
H ++D+A E + +CSSD VK+W
Sbjct: 78 HSAWVNDIALTHDSEGVISCSSDSTVKLW 106
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 34.7 bits (76), Expect = 0.014
Identities = 28/120 (23%), Positives = 50/120 (41%)
Frame = +3
Query: 96 AQTIHADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKV 275
AQ H + D A F + S D+ +++WD + T + H V V
Sbjct: 55 AQRRLTGHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKG---ECTHQFVGHTSDVLSV 111
Query: 276 TWAHPEFGQVIATCSFDRTAAIWEEVGDTTATGSEKSLRTWLKRSNLVDSRTSVTDVKFG 455
+ + P+ QV++ S D+T IW +G+ T ++ W+ + ++T V G
Sbjct: 112 SIS-PDNRQVVSG-SRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAG 169
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 34.3 bits (75), Expect = 0.019
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 159 ERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEFGQVIATCSFDRTAA 338
+ +ATCS+D V IW T+ + + + H VW ++ + T S D A
Sbjct: 228 KHLATCSADATVNIWSTEDM-SFMLERRLQGHQRWVWDCAFSAD--STYLVTASSDHVAR 284
Query: 339 IWE 347
+WE
Sbjct: 285 LWE 287
Score = 27.9 bits (59), Expect = 1.7
Identities = 21/85 (24%), Positives = 36/85 (42%)
Frame = +3
Query: 117 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEF 296
H + + +A+ G+ +AT S D VK+WD R H S HP
Sbjct: 82 HTNNVTAIAFHCDGKWLATSSEDGTVKVWDMRAPSVQR-----NYDHKSPVNDLLIHPNQ 136
Query: 297 GQVIATCSFDRTAAIWEEVGDTTAT 371
G+++ +C W ++G+ + T
Sbjct: 137 GELL-SCDQSGRVRAW-DLGENSCT 159
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 32.3 bits (70), Expect = 0.077
Identities = 22/77 (28%), Positives = 34/77 (44%)
Frame = +3
Query: 114 DHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPE 293
+H I +A+ G ++AT S+D VKIWD + + AH V V +
Sbjct: 347 EHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVS---LAHTIPAHSSLVSDVRYIESG 403
Query: 294 FGQVIATCSFDRTAAIW 344
+ IAT +D +W
Sbjct: 404 VNRFIATSGYDGCVKLW 420
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 31.9 bits (69), Expect = 0.10
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +3
Query: 117 HKDLIHDVAYDFYGERM-ATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPE 293
H D+++DV + E + A+ S D ++I DT + +AH ++ V +P
Sbjct: 234 HTDIVNDVQFHPQHEALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVA-INPF 292
Query: 294 FGQVIATCSFDRTAAIWE 347
++AT S D+T A+W+
Sbjct: 293 NDYLLATASADKTVALWD 310
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 31.9 bits (69), Expect = 0.10
Identities = 22/87 (25%), Positives = 37/87 (42%)
Frame = +3
Query: 99 QTIHADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVT 278
+ I HK +H +A + +C Q V +W+ + + +R + H W +
Sbjct: 52 EEIDTPHKLGVHHLATSLDENVVVSCGFGQDVYVWNPETN-EFRDLGNNAQHPSECWS-S 109
Query: 279 WAHPEFGQVIATCSFDRTAAIWEEVGD 359
P+ GQ IA S D A+W+ D
Sbjct: 110 CISPD-GQTIAFTSVDGRIAVWDNPSD 135
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = +3
Query: 117 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTW 281
H I VA++ G+ + + + +KIWD D ++ G++W V W
Sbjct: 228 HAAWIFAVAFNPVGDLLLSADVEGKIKIWDID---TMECISTQSETDGAIWAVAW 279
>SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 31.9 bits (69), Expect = 0.10
Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +3
Query: 66 SENIATNLFEAQTIHADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTD-GHGGWRMTAS 242
S + + E ++ ++ A D+ + S D +I+ T +GGW+ +S
Sbjct: 226 SPGVMVSRKENSPLYTVNRHKTEGYALDWSPFEYSLLSGDNANEIFLTKYSNGGWQTDSS 285
Query: 243 -WKAHHGSVWKVTWAHPEFGQVIATCSFDRTAAIWE 347
+ +H +V + W+ P V ++CS D T IW+
Sbjct: 286 PFLSHTAAVEDLQWS-PSEKNVFSSCSCDGTFRIWD 320
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 31.1 bits (67), Expect = 0.18
Identities = 21/76 (27%), Positives = 37/76 (48%)
Frame = +3
Query: 117 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEF 296
HKD I + + F G +AT D V++W + G+ +++ VW ++W HP+
Sbjct: 103 HKDSIVAIDWSFDGTYIATGGMDSQVRLWKSS--TGFEFITAFETVDEIVW-LSW-HPK- 157
Query: 297 GQVIATCSFDRTAAIW 344
G +A D + +W
Sbjct: 158 GLFLAAGCNDGSIWMW 173
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 30.7 bits (66), Expect = 0.23
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +3
Query: 156 GERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAH--PEFGQVIATCSFDR 329
GER+ + S D + +WD + T HG V A P+ G+ IAT SFD
Sbjct: 358 GERLVSASDDLQLILWDPQ-----KSTKPITKMHGHQKVVNHASFSPD-GRCIATASFDS 411
Query: 330 TAAIWE-EVGDTTAT 371
+ +W+ + G AT
Sbjct: 412 SVRLWDGKTGKFLAT 426
Score = 25.4 bits (53), Expect = 8.8
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +3
Query: 117 HKDLIHDVAYDFYGERMATCSSDQYVKIW 203
H+D + V + G+R+A+ +D+ V+IW
Sbjct: 472 HEDQVFAVDWSPDGQRVASGGADKAVRIW 500
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 30.3 bits (65), Expect = 0.31
Identities = 16/74 (21%), Positives = 35/74 (47%)
Frame = +3
Query: 135 DVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEFGQVIAT 314
+V D++ + A + + + + + ++AH + + ++HP FG +AT
Sbjct: 292 EVVSDYFEQNSAFSKAPENTESSVNQNYIVGNLVKQFQAHSEYITSLDFSHP-FG-TLAT 349
Query: 315 CSFDRTAAIWEEVG 356
S D+T +W+ G
Sbjct: 350 ASTDKTVKVWDMAG 363
Score = 27.9 bits (59), Expect = 1.7
Identities = 23/76 (30%), Positives = 31/76 (40%)
Frame = +3
Query: 117 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEF 296
H + I + + +AT S+D+ VK+WD G S K H V F
Sbjct: 331 HSEYITSLDFSHPFGTLATASTDKTVKVWDM---AGVVYLGSLKGHSDYV-SCLAIQDSF 386
Query: 297 GQVIATCSFDRTAAIW 344
IAT S D T +W
Sbjct: 387 ---IATGSMDTTVRLW 399
>SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 659
Score = 30.3 bits (65), Expect = 0.31
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 213 RLCPISLRIDHWNKWPFSPRRSRTRHRE*GLCDRHVS 103
RLC S + HW K+P +S H E +CD ++S
Sbjct: 21 RLCCCSPQTSHWCKYPALCLKSPDTHNENLVCDAYLS 57
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 29.5 bits (63), Expect = 0.54
Identities = 18/77 (23%), Positives = 38/77 (49%)
Frame = +3
Query: 117 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEF 296
H D + + Y G+R+ T + D +K+WD + G+ ++ H +V + ++ +
Sbjct: 338 HYDALSTLQYSSDGQRIITGADDGKIKVWDM--NSGF-CIVTFTQHTSAVSGLCFS--KR 392
Query: 297 GQVIATCSFDRTAAIWE 347
G V+ + S D + W+
Sbjct: 393 GNVLFSSSLDGSVRAWD 409
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 29.5 bits (63), Expect = 0.54
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Frame = +3
Query: 84 NLFEAQTIHADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGS 263
NL + + A H+ + DVA+ + T S D +K+W+ H H
Sbjct: 153 NLNNVKIVQA-HEMEVRDVAFSPNDSKFVTASDDGSLKVWNF--HMSTE-ELKLTGHGWD 208
Query: 264 VWKVTWAHPEFGQVIATCSFDRTAAIWE-EVGDTTAT 371
V V W HP G ++A+ S D W+ G AT
Sbjct: 209 VKTVDW-HPSKG-LLASGSKDNLVKFWDPRTGTCIAT 243
>SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual
Length = 421
Score = 29.1 bits (62), Expect = 0.72
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 84 NLFEAQTIHADHKDLIHDVAYDFYGERMATCSSDQYVKIWDT 209
N+ E A + + I VA+ RMAT S D+ +++WD+
Sbjct: 50 NINEKHREAAAYGEAIRQVAFSKDYSRMATVSEDKCLRLWDS 91
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 29.1 bits (62), Expect = 0.72
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = +3
Query: 435 VTDVKFGPKHLGLLLVTCSADGIIRIYEAPDVMNLAQWT--LQHEIPTK---VSISCLSW 599
VTD+ + +VTCS DG++ I+E PD+ + T L ++ + + +CLS+
Sbjct: 294 VTDITYINNPPSNNIVTCSTDGLVHIWE-PDMFSRPSETICLSSQVDSSSQCIPATCLSF 352
Query: 600 NP 605
P
Sbjct: 353 IP 354
Score = 25.4 bits (53), Expect = 8.8
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 105 IHADHKDLIHDVAY--DFYGERMATCSSDQYVKIWDTD 212
I H + + D+ Y + + TCS+D V IW+ D
Sbjct: 286 ISGGHLEPVTDITYINNPPSNNIVTCSTDGLVHIWEPD 323
>SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit
Sop2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 377
Score = 29.1 bits (62), Expect = 0.72
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 7/85 (8%)
Frame = +3
Query: 111 ADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHP 290
+DH ++ V + R+ TCS D+ +++ G W+ T + + V W+
Sbjct: 52 SDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPN 111
Query: 291 E-------FGQVIATCSFDRTAAIW 344
E +VI+ C F++ W
Sbjct: 112 EDKFAVGSGARVISVCYFEQENDWW 136
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 29.1 bits (62), Expect = 0.72
Identities = 23/76 (30%), Positives = 32/76 (42%)
Frame = +3
Query: 117 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEF 296
HKD I V G+ + + S D+ ++ W D + + H+ SV V P
Sbjct: 511 HKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSP---HSQLTLQGHNNSVISVA-VSPN- 565
Query: 297 GQVIATCSFDRTAAIW 344
G AT S D A IW
Sbjct: 566 GHCFATGSGDLRARIW 581
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 28.7 bits (61), Expect = 0.95
Identities = 24/113 (21%), Positives = 43/113 (38%)
Frame = +3
Query: 117 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEF 296
H D + + + +CS DQ ++IW+ A H V + HP
Sbjct: 94 HMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSR---NCIAILTGHSHYVMCAAF-HPS- 148
Query: 297 GQVIATCSFDRTAAIWEEVGDTTATGSEKSLRTWLKRSNLVDSRTSVTDVKFG 455
+I + S D+T +W+ G + S+ L + S+++ FG
Sbjct: 149 EDLIVSASLDQTVRVWDISGLRMKNAAPVSMSL---EDQLAQAHNSISNDLFG 198
>SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 524
Score = 28.7 bits (61), Expect = 0.95
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 93 EAQTIHADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTD 212
E Q H+D + +A M +CS+D+ +K+W D
Sbjct: 241 EPQHCWKHHRDAVMGLAMRRGTNEMFSCSADRSIKVWSLD 280
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 28.3 bits (60), Expect = 1.3
Identities = 17/77 (22%), Positives = 36/77 (46%)
Frame = +3
Query: 117 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEF 296
H+ + + D +AT ++ VK+WD G +T S++ H G + + + +
Sbjct: 102 HETPVITMTIDPTNTLLATGGAEGLVKVWDI---AGAYVTHSFRGHGGVISALCFGKHQN 158
Query: 297 GQVIATCSFDRTAAIWE 347
V+A+ + D +W+
Sbjct: 159 TWVLASGADDSRVRLWD 175
>SPAC25H1.06 |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 27.9 bits (59), Expect = 1.7
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 105 IHADHKDLIHDVAYD-FYGERMATCSSDQYVKIW 203
+HA HK +++V +D F + +A+ + D + IW
Sbjct: 368 VHAGHKGTVNEVDFDPFEAQCIASVADDNELHIW 401
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 27.5 bits (58), Expect = 2.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 111 ADHKDLIHDVAYDFYGERMATCSSDQYVKIWDT 209
A H ++ V Y G +A+C D+ ++IWD+
Sbjct: 218 AAHNGVVLCVNYSPNGVFLASCGRDKTIRIWDS 250
Score = 25.4 bits (53), Expect = 8.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 249 AHHGSVWKVTWAHPEFGQVIATCSFDRTAAIWEEVGD 359
AH+G V V ++ P G +A+C D+T IW+ +
Sbjct: 219 AHNGVVLCVNYS-PN-GVFLASCGRDKTIRIWDSTSN 253
>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 512
Score = 27.5 bits (58), Expect = 2.2
Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Frame = +3
Query: 162 RMATCSSDQYVKIWD--TDGHGGWRMTASWKAHHGSVWKVTWAHPEFGQVIATCSFDRTA 335
+ ATC D ++IW T S + H V +PE G ++AT + T
Sbjct: 33 KFATCGGDSKIRIWQLITSESSTKVEYLSTLSRHTQAVNVVRFNPE-GNILATAGDEGTI 91
Query: 336 AIW 344
+W
Sbjct: 92 MLW 94
>SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 490
Score = 27.5 bits (58), Expect = 2.2
Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 10/151 (6%)
Frame = +3
Query: 96 AQTIHA--DHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHG-----GWRMTASWKAH 254
A+ IH H + I V + +AT S DQ K++D G R + +H
Sbjct: 170 ARRIHGWLAHNNAIFSVNFSKDDSLLATSSGDQTSKVFDLSTQQCITRLGRRGVDGYHSH 229
Query: 255 HGSVWKVTWAHPEFGQVIATCSFDRTAAIWE-EVGDTTATGS--EKSLRTWLKRSNLVDS 425
SV +V + + +++ CS D + W+ T G +K + K
Sbjct: 230 --SVKQVNFCNDSPYNLVS-CSRDGSIIFWDMRTHGITIDGEHFQKPVLRIRKAHENSGR 286
Query: 426 RTSVTDVKFGPKHLGLLLVTCSADGIIRIYE 518
S+T + P+ ++ +CSA+ +++++
Sbjct: 287 DCSITSATWLPQSTSQVISSCSANSALKLWD 317
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 27.1 bits (57), Expect = 2.9
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +3
Query: 165 MATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEFGQVIATCSFDRTAAIW 344
++TCS + I+DT + S + H G VW + G + T S DRT +W
Sbjct: 421 VSTCSPR--INIYDTKTGV---LIRSLEEHEGDVWTFEYV----GDTLVTGSTDRTVRVW 471
Query: 345 E 347
+
Sbjct: 472 D 472
>SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate
dehydrogenase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 264 VWKVTWAHPEFGQVIATCSFDRTAAIWEEVGDTTATGSEKS 386
V KV + HPEF + T S ++W +G+ A G ++
Sbjct: 251 VSKVCFNHPEFAGLHFTGSTAVFRSLWGTIGENVANGKYRT 291
>SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 27.1 bits (57), Expect = 2.9
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = +3
Query: 108 HADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHH 257
HAD IH A + ++A S D K D H WKA H
Sbjct: 393 HADETPFIHPAAIELCARKVAASSGD-LRKALDICRHAIELAEREWKAQH 441
>SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inositol
pyrophosphate synthase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 920
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 207 CPISLRIDHWNKWPFSPRRSRTRH 136
CP+ + +D + SPRRS TRH
Sbjct: 868 CPLDMNLDAKHCISVSPRRSLTRH 891
>SPCC16C4.02c |||DUF1941 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 548
Score = 27.1 bits (57), Expect = 2.9
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 465 LGLLLVTCSADGIIRIYEAPD-VMNLAQWTLQHEIPTKVSISCLSWNPSLSR 617
+ +LL CS + I+R YE V L Q L+H I LS NP ++
Sbjct: 127 VSILLAFCSEEAILRSYEVKKRVSTLLQCCLKHYDLCIPVICTLSSNPKSAK 178
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 26.6 bits (56), Expect = 3.8
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +3
Query: 117 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTD 212
H I D+++ G + S D+ +K+WDT+
Sbjct: 309 HARPIRDLSFSQDGRSFLSTSFDKTIKLWDTE 340
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 26.6 bits (56), Expect = 3.8
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Frame = +3
Query: 117 HKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGH-GGWRMTASWK-AHHG---SVWKVTW 281
HKD+I +A G + + S D V+I+D R ++ A HG ++ V W
Sbjct: 218 HKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEHNLLGVAW 277
Query: 282 AHPEFGQVIATCSFDRTAAIWEEVGD 359
+ + + S D+ +W GD
Sbjct: 278 SRN--SRFVGAGSSDKNVYVWSATGD 301
>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 807
Score = 26.6 bits (56), Expect = 3.8
Identities = 29/112 (25%), Positives = 45/112 (40%)
Frame = +3
Query: 54 IITMSENIATNLFEAQTIHADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRM 233
I E + T +T HAD H A + A S+ Q +I +++
Sbjct: 127 IYVKDEGLRTETIVKKTEHADSN---HQPAVSIEESKEAVESTSQSSEI-------SFKL 176
Query: 234 TASWKAHHGSVWKVTWAHPEFGQVIATCSFDRTAAIWEEVGDTTATGSEKSL 389
+ HH V + A GQ +A+ SFD T +W+ + G EKS+
Sbjct: 177 IKVIEGHHTFVGGL--AFDPMGQFLASQSFDHTLKVWK----LSTFGVEKSI 222
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 26.6 bits (56), Expect = 3.8
Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +3
Query: 99 QTIH--ADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWK 272
Q +H + HK + +A + ++ T S D +++WD T + HH +
Sbjct: 280 QNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAA----GKTLTTLTHHKKTVR 335
Query: 273 VTWAHPE 293
HP+
Sbjct: 336 ALSLHPD 342
Score = 26.2 bits (55), Expect = 5.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 468 GLLLVTCSADGIIRIYEAPD 527
GL L+TC AD ++IY+ D
Sbjct: 433 GLRLITCEADKSVKIYKQVD 452
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 26.2 bits (55), Expect = 5.0
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 99 QTIHADHKDLIHDVAYDFYGERMATCSSDQYVKIWDTDG 215
QT D+ L + + AT SS+Q +KIWDT G
Sbjct: 1215 QTFSTDNSGLTSLTVHS-HAPVYATGSSNQSIKIWDTLG 1252
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 26.2 bits (55), Expect = 5.0
Identities = 14/63 (22%), Positives = 26/63 (41%)
Frame = +3
Query: 159 ERMATCSSDQYVKIWDTDGHGGWRMTASWKAHHGSVWKVTWAHPEFGQVIATCSFDRTAA 338
++ +S Q +W+ + H +V + W H + V+ATCS D +
Sbjct: 290 DQWVVSTSSQKTIVWNLALPNDRAIEFMLHGHTRAVTDMNW-HRQNPDVLATCSIDSSVH 348
Query: 339 IWE 347
W+
Sbjct: 349 CWD 351
>SPAC1556.08c ||SPAC1F12.01c|protein kinase activator Snf4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 334
Score = 25.8 bits (54), Expect = 6.7
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = +3
Query: 375 SEKSLRTWLKRSNLVDS--RTSVTDV--KFGPKHLGLLLVTCSADGIIRIYEAPDVMNLA 542
++ ++ TW SNL + T V DV K++ + + S ++ +YE+ DVM+L
Sbjct: 185 NQMTIGTW---SNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHLI 241
Query: 543 Q 545
Q
Sbjct: 242 Q 242
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.8 bits (54), Expect = 6.7
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 237 ASWKAHHGSVWKVTWAHPEFGQVIATCSFDRTAAIWE 347
A K H V V + HP V+A+ S D T +W+
Sbjct: 128 AELKGHSRKVGLVQY-HPTAANVLASSSADNTIKLWD 163
>SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr
3|||Manual
Length = 963
Score = 25.8 bits (54), Expect = 6.7
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 567 PTKVSISCLSWNPSLSRVGNPPMLAVGSDEPNTTNALASVPS 692
PTK + S L W+ S + + + +EP NA VPS
Sbjct: 811 PTKATHSVLPWSAMWSIISTQSVRTMFYNEPIHQNAFHVVPS 852
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.4 bits (53), Expect = 8.8
Identities = 14/69 (20%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -2
Query: 460 LGPNLTSVT-EVLESTRFDRFSHVRKLFSEPVAVVSPTSSQIAAVLSKEQVAMTCPNSGW 284
LG +++ T E + ++ + ++ R ++SP S ++ VLS+ + ++ +S
Sbjct: 752 LGNKVSNPTKEFVSTSSYAPAANTRNAIIREPGILSPLSPRVQPVLSRRESIISMGSSAS 811
Query: 283 AHVTFQTEP 257
++V + P
Sbjct: 812 SYVPLEIAP 820
>SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 556
Score = 25.4 bits (53), Expect = 8.8
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 285 HPEFGQVIATCSFDRTAAIWEEVGDTTATGSEKSLRT 395
HP F ++ TC FDRT I++ G + LR+
Sbjct: 226 HPYF-PLLLTCGFDRTLRIYQLDGKVNPLVTSLHLRS 261
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,321,726
Number of Sequences: 5004
Number of extensions: 73126
Number of successful extensions: 342
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 322
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 361294920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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