Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt29m04
(691 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK057033-1|BAB71351.1| 246|Homo sapiens protein ( Homo sapiens ... 70 9e-12
BC063500-1|AAH63500.2| 591|Homo sapiens tigger transposable ele... 69 1e-11
BC035143-1|AAH35143.2| 591|Homo sapiens tigger transposable ele... 69 1e-11
AK056329-1|BAB71153.1| 591|Homo sapiens protein ( Homo sapiens ... 69 1e-11
AC092165-4|AAY24104.1| 591|Homo sapiens unknown protein. 69 1e-11
U49973-1|AAB61714.1| 454|Homo sapiens putative transposase prot... 69 2e-11
AK056131-1|BAB71100.1| 180|Homo sapiens protein ( Homo sapiens ... 61 3e-09
BC109202-1|AAI09203.1| 524|Homo sapiens jerky homolog-like (mou... 56 9e-08
AC104785-1|AAY40951.1| 525|Homo sapiens unknown protein. 56 2e-07
BC043351-1|AAH43351.1| 568|Homo sapiens JRK protein protein. 55 3e-07
AK127631-1|BAC87064.1| 556|Homo sapiens protein ( Homo sapiens ... 54 4e-07
X55039-1|CAA38879.1| 599|Homo sapiens centromere autoantigen B ... 42 0.003
BC053847-1|AAH53847.1| 599|Homo sapiens centromere protein B, 8... 42 0.003
AL109804-11|CAC17547.1| 599|Homo sapiens centromere protein B, ... 42 0.003
X05299-1|CAA28918.1| 594|Homo sapiens CENP-B protein. 41 0.005
AF002713-1|AAB70165.1| 125|Homo sapiens centromere protein B pr... 40 0.011
AY354497-1|AAR10443.1| 2916|Homo sapiens cadherin protein protein. 35 0.31
BC001952-1|AAH01952.1| 32|Homo sapiens MGC2752 protein protein. 31 5.1
BC019340-1|AAH19340.1| 298|Homo sapiens similar to Cytochrome c... 30 6.8
AF072469-1|AAC32354.1| 88|Homo sapiens unknown protein. 30 8.9
>AK057033-1|BAB71351.1| 246|Homo sapiens protein ( Homo sapiens
cDNA FLJ32471 fis, clone SKNMC2000322, weakly similar to
MAJOR CENTROMERE AUTOANTIGEN B. ).
Length = 246
Score = 69.7 bits (163), Expect = 9e-12
Identities = 43/156 (27%), Positives = 83/156 (53%), Gaps = 4/156 (2%)
Frame = +1
Query: 214 RNKSVLPLKVKIEMLDRLHLGESFASISRSFNVNESTVRSIKKSEDKIRSSI-ASYSLSA 390
+ + + L++K++++ + G+ +I+R + +ST+ +I + + +I + +S S+ +
Sbjct: 16 KKRKAITLEMKLKIIAQHEGGKPVMAIARELGLWQSTISTILRDKKQISDAAKSSASVKS 75
Query: 391 KIV---RDPAIEKMEVALSFWIEDCNQKRVPLSGAMVREKAKRLYAHFKEPXXXXXXXXX 561
++ R I+ ME L W+ED QKR+PLS M++ KA+ L+ K+
Sbjct: 76 TVITKKRAGPIDDMEKLLVMWMEDQIQKRIPLSLLMIQAKARSLFNMLKD----RASDPT 131
Query: 562 XXXXFQASEGWFNKFKVRQSLHSINSDEEPSTSTGN 669
F+AS GWF +FK R + H++ E + GN
Sbjct: 132 YTQMFKASHGWFQRFKRRHNFHNVKITGE-AARAGN 166
>BC063500-1|AAH63500.2| 591|Homo sapiens tigger transposable
element derived 1 protein.
Length = 591
Score = 69.3 bits (162), Expect = 1e-11
Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 3/152 (1%)
Frame = +1
Query: 214 RNKSVLPLKVKIEMLDRLHLGESFASISRSFNVNESTVRSIKKSEDKIRSSIASYS-LSA 390
++++ L L K+EM+ G S A I R + TV + +++K + S + ++
Sbjct: 10 KSRTSLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEVKSATPMNT 69
Query: 391 KIVR--DPAIEKMEVALSFWIEDCNQKRVPLSGAMVREKAKRLYAHFKEPXXXXXXXXXX 564
+++R + I ME L WIED + +PLS ++++ KA L+ K
Sbjct: 70 RMIRKRNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMK----AERGVEAA 125
Query: 565 XXXFQASEGWFNKFKVRQSLHSINSDEEPSTS 660
F+AS GWF +FK R H+I + E +++
Sbjct: 126 EEKFEASRGWFMRFKERSHFHNIKAQGEAASA 157
>BC035143-1|AAH35143.2| 591|Homo sapiens tigger transposable
element derived 1 protein.
Length = 591
Score = 69.3 bits (162), Expect = 1e-11
Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 3/152 (1%)
Frame = +1
Query: 214 RNKSVLPLKVKIEMLDRLHLGESFASISRSFNVNESTVRSIKKSEDKIRSSIASYS-LSA 390
++++ L L K+EM+ G S A I R + TV + +++K + S + ++
Sbjct: 10 KSRTSLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEVKSATPMNT 69
Query: 391 KIVR--DPAIEKMEVALSFWIEDCNQKRVPLSGAMVREKAKRLYAHFKEPXXXXXXXXXX 564
+++R + I ME L WIED + +PLS ++++ KA L+ K
Sbjct: 70 RMIRKRNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMK----AERGVEAA 125
Query: 565 XXXFQASEGWFNKFKVRQSLHSINSDEEPSTS 660
F+AS GWF +FK R H+I + E +++
Sbjct: 126 EEKFEASRGWFMRFKERSHFHNIKAQGEAASA 157
>AK056329-1|BAB71153.1| 591|Homo sapiens protein ( Homo sapiens
cDNA FLJ31767 fis, clone NT2RI2007884, weakly similar to
ARS BINDING PROTEIN 1. ).
Length = 591
Score = 69.3 bits (162), Expect = 1e-11
Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 3/152 (1%)
Frame = +1
Query: 214 RNKSVLPLKVKIEMLDRLHLGESFASISRSFNVNESTVRSIKKSEDKIRSSIASYS-LSA 390
++++ L L K+EM+ G S A I R + TV + +++K + S + ++
Sbjct: 10 KSRTSLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEVKSATPMNT 69
Query: 391 KIVR--DPAIEKMEVALSFWIEDCNQKRVPLSGAMVREKAKRLYAHFKEPXXXXXXXXXX 564
+++R + I ME L WIED + +PLS ++++ KA L+ K
Sbjct: 70 RMIRKRNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMK----AERGVEAA 125
Query: 565 XXXFQASEGWFNKFKVRQSLHSINSDEEPSTS 660
F+AS GWF +FK R H+I + E +++
Sbjct: 126 EEKFEASRGWFMRFKERSHFHNIKAQGEAASA 157
>AC092165-4|AAY24104.1| 591|Homo sapiens unknown protein.
Length = 591
Score = 69.3 bits (162), Expect = 1e-11
Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 3/152 (1%)
Frame = +1
Query: 214 RNKSVLPLKVKIEMLDRLHLGESFASISRSFNVNESTVRSIKKSEDKIRSSIASYS-LSA 390
++++ L L K+EM+ G S A I R + TV + +++K + S + ++
Sbjct: 10 KSRTSLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEVKSATPMNT 69
Query: 391 KIVR--DPAIEKMEVALSFWIEDCNQKRVPLSGAMVREKAKRLYAHFKEPXXXXXXXXXX 564
+++R + I ME L WIED + +PLS ++++ KA L+ K
Sbjct: 70 RMIRKRNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMK----AERGVEAA 125
Query: 565 XXXFQASEGWFNKFKVRQSLHSINSDEEPSTS 660
F+AS GWF +FK R H+I + E +++
Sbjct: 126 EEKFEASRGWFMRFKERSHFHNIKAQGEAASA 157
>U49973-1|AAB61714.1| 454|Homo sapiens putative transposase
protein.
Length = 454
Score = 68.5 bits (160), Expect = 2e-11
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 3/154 (1%)
Frame = +1
Query: 214 RNKSVLPLKVKIEMLDRLHLGESFASISRSFNVNESTVRSIKKSEDKIRSSIASYS-LSA 390
++++ L L K+EM+ G S A I R + TV + +++K I S + ++
Sbjct: 10 KSRTSLTLNQKLEMIKLSEEGMSKAEIGRKLGLLRQTVSQVVNAKEKFLKEIKSATPVNT 69
Query: 391 KIVR--DPAIEKMEVALSFWIEDCNQKRVPLSGAMVREKAKRLYAHFKEPXXXXXXXXXX 564
+++R + I ME L WIED +PLS ++++ KA L+ K
Sbjct: 70 RMIRKRNSLIADMEKVLVVWIEDQTSHNIPLSQSLIQSKALTLFNSMK----AERGEEAA 125
Query: 565 XXXFQASEGWFNKFKVRQSLHSINSDEEPSTSTG 666
+AS GWF +FK R LH+I E +++ G
Sbjct: 126 EEKLEASRGWFMRFKERSRLHNIKVQGEAASADG 159
>AK056131-1|BAB71100.1| 180|Homo sapiens protein ( Homo sapiens
cDNA FLJ31569 fis, clone NT2RI2001621, weakly similar to
Probable transposase - human transposon MER37. ).
Length = 180
Score = 61.3 bits (142), Expect = 3e-09
Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 4/135 (2%)
Frame = +1
Query: 217 NKSVLPLKVKIEMLDRLHLGESFASISRSFNVNESTVRSIKKSEDKIRSS--IASYSLSA 390
N LPL + D GE + I+++ ++ STV +I+ S++KI++S IA+ ++
Sbjct: 11 NGKRLPLTSNWKCYDDFEAGEKLSQIAKALDLAISTVATIRDSKEKIKASSQIATPLRAS 70
Query: 391 KIVR--DPAIEKMEVALSFWIEDCNQKRVPLSGAMVREKAKRLYAHFKEPXXXXXXXXXX 564
++ R +E ME LS W+ED +Q LS A+V+EKA+ +
Sbjct: 71 RLTRHRSAVMESMEQLLSLWLEDQSQPNATLSAAIVQEKAE------FDDLQREHGEGSQ 124
Query: 565 XXXFQASEGWFNKFK 609
F AS+GW +FK
Sbjct: 125 TERFHASQGWLVRFK 139
>BC109202-1|AAI09203.1| 524|Homo sapiens jerky homolog-like (mouse)
protein.
Length = 524
Score = 56.4 bits (130), Expect = 9e-08
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Frame = +1
Query: 214 RNKSVLPLKVKIEMLDRLHLGESFASISRSFNVNESTVRSIKKSEDKI---RSSIASYSL 384
R + VL +K K++++ +L G S ++ + + E+TVR I+K+++KI SS S SL
Sbjct: 5 RKRVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASSSDSTSL 64
Query: 385 SAK--IVRDPAIEKMEVALSFWIEDCNQKRVPLSGAMVREKAKRLYAHFKEPXXXXXXXX 558
AK ++ E+++ A+ W K P+SG + ++A+ +
Sbjct: 65 LAKRKSMKPSMYEELDRAMLEWFNQQRAKGNPISGPICAKRAEFFF-----------YAL 113
Query: 559 XXXXXFQASEGWFNKFKVRQSLHSINSDEE 648
F S GW +FK R S+ IN E
Sbjct: 114 GMDGDFNPSAGWLTRFKQRHSIREINIRNE 143
>AC104785-1|AAY40951.1| 525|Homo sapiens unknown protein.
Length = 525
Score = 55.6 bits (128), Expect = 2e-07
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 5/142 (3%)
Frame = +1
Query: 214 RNKSVLPLKVKIEMLDRLHLGESFASISRSFNVNESTVRSIKKSEDKI----RSSIASYS 381
R + VL +K K++++ +L G SF +S + + ESTVR IKK++++I SS +
Sbjct: 5 RKRVVLTIKDKLDIIKKLEEGISFKKLSVVYGIGESTVRDIKKNKERIINYANSSDPTSG 64
Query: 382 LS-AKIVRDPAIEKMEVALSFWIEDCNQKRVPLSGAMVREKAKRLYAHFKEPXXXXXXXX 558
+S K ++ E+++ + W +P+SG + ++AK +
Sbjct: 65 VSKRKSMKSSTYEELDRVMIEWFNQQKTDGIPVSGTICAKQAKFFF-----------DAL 113
Query: 559 XXXXXFQASEGWFNKFKVRQSL 624
F AS GW +FK R +
Sbjct: 114 GMEGDFNASSGWLTRFKQRHGI 135
>BC043351-1|AAH43351.1| 568|Homo sapiens JRK protein protein.
Length = 568
Score = 54.8 bits (126), Expect = 3e-07
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 7/162 (4%)
Frame = +1
Query: 196 EKRVSARNKSVLPLKVKIEMLDRLHLGESFASISRSFNVNESTVRSIKKSEDKI----RS 363
+ R R + VL LK KI++ RL GES ++ + +NV ST+ I+ + ++ S
Sbjct: 9 KSRGEKRKRVVLTLKEKIDICTRLEKGESRKALMQEYNVGMSTLYDIRAHKAQLLRFFAS 68
Query: 364 SIASYSL-SAKIVRDPAIEKMEVALSFWIEDCNQKRVPLSGAMVREKAKRLYAHFK--EP 534
S ++ +L + + P +E ++ L W + VP+SG M+ EKAK Y + EP
Sbjct: 69 SDSNKALEQRRTLHTPKLEHLDRVLYEWFLGKRSEGVPVSGPMLIEKAKDFYEQMQLTEP 128
Query: 535 XXXXXXXXXXXXXFQASEGWFNKFKVRQSLHSINSDEEPSTS 660
S GW +FK R + +++ E ++
Sbjct: 129 CVF-------------SGGWLWRFKARHGIKKLDASSEKQSA 157
>AK127631-1|BAC87064.1| 556|Homo sapiens protein ( Homo sapiens
cDNA FLJ45729 fis, clone HHDPC2008185, moderately
similar to Mus musculus jerky (Jrk). ).
Length = 556
Score = 54.4 bits (125), Expect = 4e-07
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 7/162 (4%)
Frame = +1
Query: 196 EKRVSARNKSVLPLKVKIEMLDRLHLGESFASISRSFNVNESTVRSIKKSEDKI----RS 363
+ R R + VL LK KI++ RL GES ++ + +NV ST+ I+ + ++ S
Sbjct: 9 KSRGEKRKRVVLTLKEKIDICTRLEKGESRKALMQEYNVGMSTLYDIRAHKAQLLRFFAS 68
Query: 364 SIASYSL-SAKIVRDPAIEKMEVALSFWIEDCNQKRVPLSGAMVREKAKRLY--AHFKEP 534
S ++ +L + + P +E ++ L W + VP+SG M+ EKAK Y EP
Sbjct: 69 SDSNKALEQRRTLHTPKLEHLDRVLYEWFLGKRSEGVPVSGPMLIEKAKDFYEQTQLTEP 128
Query: 535 XXXXXXXXXXXXXFQASEGWFNKFKVRQSLHSINSDEEPSTS 660
S GW +FK R + +++ E ++
Sbjct: 129 CVF-------------SGGWLWRFKARHGIKKLDASSEKQSA 157
>X55039-1|CAA38879.1| 599|Homo sapiens centromere autoantigen B
(CENP-B) protein.
Length = 599
Score = 41.5 bits (93), Expect = 0.003
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 3/149 (2%)
Frame = +1
Query: 193 KEKRVSARNKSVLPLKVKIEMLDRLHLGESFASISRSFNVNESTVRSIKKSEDKIRSSIA 372
K ++++ R KS + +V+ E D L GE I+R FN+ ST+ +I K++ I +S
Sbjct: 4 KRRQLTFREKSRIIQEVE-ENPD-LRKGE----IARRFNIPPSTLSTILKNKRAILASER 57
Query: 373 SYSLSA---KIVRDPAIEKMEVALSFWIEDCNQKRVPLSGAMVREKAKRLYAHFKEPXXX 543
Y +++ K + +K+E L W + +P+ G +++EKA R+
Sbjct: 58 KYGVASTCRKTNKLSPYDKLEGLLIAWFQQIRAAGLPVKGIILKEKALRIAEEL------ 111
Query: 544 XXXXXXXXXXFQASEGWFNKFKVRQSLHS 630
F AS GW ++F+ R + S
Sbjct: 112 ------GMDDFTASNGWLDRFRRRHGVVS 134
>BC053847-1|AAH53847.1| 599|Homo sapiens centromere protein B,
80kDa protein.
Length = 599
Score = 41.5 bits (93), Expect = 0.003
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 3/149 (2%)
Frame = +1
Query: 193 KEKRVSARNKSVLPLKVKIEMLDRLHLGESFASISRSFNVNESTVRSIKKSEDKIRSSIA 372
K ++++ R KS + +V+ E D L GE I+R FN+ ST+ +I K++ I +S
Sbjct: 4 KRRQLTFREKSRIIQEVE-ENPD-LRKGE----IARRFNIPPSTLSTILKNKRAILASER 57
Query: 373 SYSLSA---KIVRDPAIEKMEVALSFWIEDCNQKRVPLSGAMVREKAKRLYAHFKEPXXX 543
Y +++ K + +K+E L W + +P+ G +++EKA R+
Sbjct: 58 KYGVASTCRKTNKLSPYDKLEGLLIAWFQQIRAAGLPVKGIILKEKALRIAEEL------ 111
Query: 544 XXXXXXXXXXFQASEGWFNKFKVRQSLHS 630
F AS GW ++F+ R + S
Sbjct: 112 ------GMDDFTASNGWLDRFRRRHGVVS 134
>AL109804-11|CAC17547.1| 599|Homo sapiens centromere protein B,
80kDa protein.
Length = 599
Score = 41.5 bits (93), Expect = 0.003
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 3/149 (2%)
Frame = +1
Query: 193 KEKRVSARNKSVLPLKVKIEMLDRLHLGESFASISRSFNVNESTVRSIKKSEDKIRSSIA 372
K ++++ R KS + +V+ E D L GE I+R FN+ ST+ +I K++ I +S
Sbjct: 4 KRRQLTFREKSRIIQEVE-ENPD-LRKGE----IARRFNIPPSTLSTILKNKRAILASER 57
Query: 373 SYSLSA---KIVRDPAIEKMEVALSFWIEDCNQKRVPLSGAMVREKAKRLYAHFKEPXXX 543
Y +++ K + +K+E L W + +P+ G +++EKA R+
Sbjct: 58 KYGVASTCRKTNKLSPYDKLEGLLIAWFQQIRAAGLPVKGIILKEKALRIAEEL------ 111
Query: 544 XXXXXXXXXXFQASEGWFNKFKVRQSLHS 630
F AS GW ++F+ R + S
Sbjct: 112 ------GMDDFTASNGWLDRFRRRHGVVS 134
>X05299-1|CAA28918.1| 594|Homo sapiens CENP-B protein.
Length = 594
Score = 40.7 bits (91), Expect = 0.005
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Frame = +1
Query: 292 ISRSFNVNESTVRSIKKSEDKIRSSIASYSLSA---KIVRDPAIEKMEVALSFWIEDCNQ 462
I+R FN+ ST+ +I K++ I +S Y +++ K + +K+E L W +
Sbjct: 26 IARRFNIPPSTLSTILKNKRAILASERKYGVASTCRKTNKLSPYDKLEGLLIAWFQQIRA 85
Query: 463 KRVPLSGAMVREKAKRLYAHFKEPXXXXXXXXXXXXXFQASEGWFNKFKVRQSLHS 630
+P+ G +++EKA R+ F AS GW ++F+ R + S
Sbjct: 86 AGLPVKGIILKEKALRIAEEL------------GMDDFTASNGWLDRFRRRHGVVS 129
>AF002713-1|AAB70165.1| 125|Homo sapiens centromere protein B
protein.
Length = 125
Score = 39.5 bits (88), Expect = 0.011
Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Frame = +1
Query: 193 KEKRVSARNKSVLPLKVKIEMLDRLHLGESFASISRSFNVNESTVRSIKKSEDKIRSSIA 372
K ++++ R KS + +V+ E D L GE I+R FN+ ST+ +I K++ I +S
Sbjct: 4 KRRQLTFREKSRIIQEVE-ENPD-LRKGE----IARRFNIPPSTLSTILKNKRAILASER 57
Query: 373 SYSLSA---KIVRDPAIEKMEVALSFWIEDCNQKRVPLSGAMVREKAKRL 513
Y +++ K + +K+E L W + +P+ G +++EKA R+
Sbjct: 58 KYGVASTCRKTNKLSPYDKLEGLLIAWFQQIRAAGLPVKGIILKEKALRI 107
>AY354497-1|AAR10443.1| 2916|Homo sapiens cadherin protein protein.
Length = 2916
Score = 34.7 bits (76), Expect = 0.31
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +1
Query: 574 FQASEGWFNKFKVRQSLHSINSDEEPSTSTG 666
F+AS GWF +FK R+ LH + +E +++ G
Sbjct: 280 FEASRGWFMRFKGRRHLHYLKVQDEAASADG 310
>BC001952-1|AAH01952.1| 32|Homo sapiens MGC2752 protein protein.
Length = 32
Score = 30.7 bits (66), Expect = 5.1
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +1
Query: 421 MEVALSFWIEDCNQKRVPLSGAMVREKA 504
ME LS +ED +Q+ +PLS ++REKA
Sbjct: 1 MEQLLSMRMEDQSQRNMPLSVVLIREKA 28
>BC019340-1|AAH19340.1| 298|Homo sapiens similar to Cytochrome c,
somatic protein.
Length = 298
Score = 30.3 bits (65), Expect = 6.8
Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 5/107 (4%)
Frame = +1
Query: 319 STVRSIKKSEDKIRSSIASYS-----LSAKIVRDPAIEKMEVALSFWIEDCNQKRVPLSG 483
+T+ +KK +DK+ A + K + E ++ L WI + +PL+G
Sbjct: 2 TTIYDLKKQKDKLLKFYAESDEQILMKNRKTLHKAKNEDLDRVLKEWIRQRRSEHMPLNG 61
Query: 484 AMVREKAKRLYAHFKEPXXXXXXXXXXXXXFQASEGWFNKFKVRQSL 624
++ ++AK + K + S GW KFK R +
Sbjct: 62 MLIMKQAKIYHNELK-----------IEGNCEYSTGWLQKFKKRHGI 97
>AF072469-1|AAC32354.1| 88|Homo sapiens unknown protein.
Length = 88
Score = 29.9 bits (64), Expect = 8.9
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 391 KIVRDPAIEKMEVALSFWIEDCNQKRVPLSGAMVREKAKRLY 516
+ + P +E ++ L W + VP+SG M+ EKAK Y
Sbjct: 31 RTLHTPKLEHLDRVLYEWFLGKRSEGVPVSGPMLIEKAKDFY 72
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,185,260
Number of Sequences: 237096
Number of extensions: 1502029
Number of successful extensions: 3120
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3109
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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