Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt29m01
(735 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical ... 41 8e-04
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 36 0.030
U64843-12|AAL08039.1| 492|Caenorhabditis elegans Hypothetical p... 34 0.12
AF098505-1|AAC67415.1| 536|Caenorhabditis elegans Hypothetical ... 30 2.0
U47144-5|AAB52621.2| 1410|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81455-6|CAN86597.1| 695|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81455-5|CAJ90505.1| 611|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81455-4|CAJ76928.1| 680|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81455-2|CAD54123.1| 745|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81455-1|CAB03807.2| 792|Caenorhabditis elegans Hypothetical pr... 29 4.5
U40059-3|AAP68936.1| 280|Caenorhabditis elegans Forkhead transc... 29 4.5
U40059-2|AAA81139.2| 300|Caenorhabditis elegans Forkhead transc... 29 4.5
AL032637-27|CAN86620.1| 695|Caenorhabditis elegans Hypothetical... 29 4.5
AL032637-26|CAJ90512.1| 611|Caenorhabditis elegans Hypothetical... 29 4.5
AL032637-25|CAJ76956.1| 680|Caenorhabditis elegans Hypothetical... 29 4.5
AL032637-24|CAD54171.1| 745|Caenorhabditis elegans Hypothetical... 29 4.5
AL032637-23|CAA21625.2| 792|Caenorhabditis elegans Hypothetical... 29 4.5
AL032637-1|CAD54169.1| 555|Caenorhabditis elegans Hypothetical ... 29 4.5
AF036705-7|AAB95174.1| 324|Caenorhabditis elegans Hypothetical ... 28 6.0
>AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical
protein W10G11.5 protein.
Length = 345
Score = 41.1 bits (92), Expect = 8e-04
Identities = 31/85 (36%), Positives = 42/85 (49%)
Frame = +3
Query: 396 STTVYAHYISTTVYAHYISTTVYAHYISTTVYAHYISTTVYAHYISTTVYAHYISTTVYA 575
+TT + ++TV I TTV +TTV I TTV + +I TTV I TTV +
Sbjct: 74 ATTTLSSTTASTVTPTPILTTVTTTSTTTTVTTTPIPTTVTSTHIPTTVTTTSIPTTVPS 133
Query: 576 HYISTTVYAHYISTTVYAHYISTTV 650
+ TTV I TT +TT+
Sbjct: 134 TQLPTTVTTTPIPTTTTRKTTTTTL 158
Score = 37.1 bits (82), Expect = 0.013
Identities = 27/68 (39%), Positives = 34/68 (50%)
Frame = +3
Query: 393 ISTTVYAHYISTTVYAHYISTTVYAHYISTTVYAHYISTTVYAHYISTTVYAHYISTTVY 572
I TTV +TTV I TTV + +I TTV I TTV + + TTV I TT
Sbjct: 91 ILTTVTTTSTTTTVTTTPIPTTVTSTHIPTTVTTTSIPTTVPSTQLPTTVTTTPIPTTTT 150
Query: 573 AHYISTTV 596
+TT+
Sbjct: 151 RKTTTTTL 158
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 35.9 bits (79), Expect = 0.030
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +2
Query: 395 KYHSVRPLHKYHSVRPLHK---YHSVRPLHKYHSVRPLHKYHSVRPLHKYHSVRPLH 556
++H +P H +H P H+ +H+ P+H + R H H + +H+ RP H
Sbjct: 762 RHHYTQP-HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQRPRH 817
Score = 35.9 bits (79), Expect = 0.030
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +2
Query: 422 KYHSVRPLHKYHSVRPLHK---YHSVRPLHKYHSVRPLHKYHSVRPLHKYHSVRPLH 583
++H +P H +H P H+ +H+ P+H + R H H + +H+ RP H
Sbjct: 762 RHHYTQP-HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQRPRH 817
Score = 35.9 bits (79), Expect = 0.030
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +2
Query: 449 KYHSVRPLHKYHSVRPLHK---YHSVRPLHKYHSVRPLHKYHSVRPLHKYHSVRPLH 610
++H +P H +H P H+ +H+ P+H + R H H + +H+ RP H
Sbjct: 762 RHHYTQP-HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQRPRH 817
Score = 35.9 bits (79), Expect = 0.030
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +2
Query: 476 KYHSVRPLHKYHSVRPLHK---YHSVRPLHKYHSVRPLHKYHSVRPLHKYHSVRPLH 637
++H +P H +H P H+ +H+ P+H + R H H + +H+ RP H
Sbjct: 762 RHHYTQP-HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQRPRH 817
Score = 35.9 bits (79), Expect = 0.030
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +2
Query: 503 KYHSVRPLHKYHSVRPLHK---YHSVRPLHKYHSVRPLHKYHSVRPLHKYHSVRPLH 664
++H +P H +H P H+ +H+ P+H + R H H + +H+ RP H
Sbjct: 762 RHHYTQP-HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQRPRH 817
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +2
Query: 392 HKYHSVRPLHK---YHSVRPLHKYHSVRPLHKYHSVRPLHKYHSVRPLH 529
H +H P H+ +H+ P+H + R H H + +H+ RP H
Sbjct: 769 HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQRPRH 817
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +2
Query: 530 KYHSVRPLHKYHSVRPLHK---YHSVRPLHKYHSVRPLHKYHSVRPLHKYHSVR 682
++H +P H +H P H+ +H+ P+H + R H H + +H+ R
Sbjct: 762 RHHYTQP-HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQR 814
>U64843-12|AAL08039.1| 492|Caenorhabditis elegans Hypothetical
protein K06C4.9 protein.
Length = 492
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +3
Query: 396 STTVYAHYISTTVYAHYISTTV-YAHYISTTVYAHYISTTVYA-HYISTTVYAHYISTTV 569
+TT+ + H+ +TT+ + + +S T YA + + H+IS + Y ++TV
Sbjct: 373 TTTMLLVMVILYATCHFFNTTLKFINMVSKT-YAQFRFPVIRVIHHISNLLLVIYSASTV 431
Query: 570 YAHYISTTVYAHYISTTVYAHY 635
+ + I +T Y +ST V Y
Sbjct: 432 FIYLIFSTKYRKVLSTCVTCGY 453
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +3
Query: 423 STTVYAHYISTTVYAHYISTTV-YAHYISTTVYAHYISTTVYA-HYISTTVYAHYISTTV 596
+TT+ + H+ +TT+ + + +S T YA + + H+IS + Y ++TV
Sbjct: 373 TTTMLLVMVILYATCHFFNTTLKFINMVSKT-YAQFRFPVIRVIHHISNLLLVIYSASTV 431
Query: 597 YAHYISTTVYAHYISTTVYAHY 662
+ + I +T Y +ST V Y
Sbjct: 432 FIYLIFSTKYRKVLSTCVTCGY 453
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 387 HYISTTV-YAHYISTTVYAHYISTTVYA-HYISTTVYAHYISTTVYAHYISTTVYAHYIS 560
H+ +TT+ + + +S T YA + + H+IS + Y ++TV+ + I +T Y +S
Sbjct: 388 HFFNTTLKFINMVSKT-YAQFRFPVIRVIHHISNLLLVIYSASTVFIYLIFSTKYRKVLS 446
Query: 561 TTVYAHY 581
T V Y
Sbjct: 447 TCVTCGY 453
>AF098505-1|AAC67415.1| 536|Caenorhabditis elegans Hypothetical
protein Y71H10A.2 protein.
Length = 536
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/76 (22%), Positives = 32/76 (42%)
Frame = +3
Query: 411 AHYISTTVYAHYISTTVYAHYISTTVYAHYISTTVYAHYISTTVYAHYISTTVYAHYIST 590
AH + + I+ VYA +IS T+ + TT Y + + + + + +I
Sbjct: 459 AHLLKMRIRRQVIAAIVYAGFIS-TIGRKWKKTTQYLTWFGAMLATYTYTEVSFRRHIPL 517
Query: 591 TVYAHYISTTVYAHYI 638
Y T+ Y+ Y+
Sbjct: 518 KSLKDYTQTSDYSRYL 533
>U47144-5|AAB52621.2| 1410|Caenorhabditis elegans Hypothetical
protein ZC53.4 protein.
Length = 1410
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -1
Query: 693 VMLWRTLWYLCSGRTLWYLCSGRTLWYLCSGRTLW 589
+ +WR Y+ G TL+Y+ GR++W + S +T +
Sbjct: 101 IKIWRI--YVTIGVTLFYIFIGRSIWMVLSPKTFF 133
>Z81455-6|CAN86597.1| 695|Caenorhabditis elegans Hypothetical
protein B0399.1f protein.
Length = 695
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +2
Query: 317 TNQHGRATKSTLKDKFLFLITKIPLHKYHSVRPLHKYHSVRPLHKYHSVRPLHKYHSVRP 496
TNQ A S L++ + K LHK +R H H R LH + R + K+ +
Sbjct: 468 TNQRKNAAASVLQETWFIHKYKKALHKGDDLRLRH--HQRRFLHSINEFRRI-KWDQRKL 524
Query: 497 LHKYHSVRPLHKYHS 541
K +S+ + K HS
Sbjct: 525 QEKGNSLLDVGKLHS 539
>Z81455-5|CAJ90505.1| 611|Caenorhabditis elegans Hypothetical
protein B0399.1e protein.
Length = 611
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +2
Query: 317 TNQHGRATKSTLKDKFLFLITKIPLHKYHSVRPLHKYHSVRPLHKYHSVRPLHKYHSVRP 496
TNQ A S L++ + K LHK +R H H R LH + R + K+ +
Sbjct: 384 TNQRKNAAASVLQETWFIHKYKKALHKGDDLRLRH--HQRRFLHSINEFRRI-KWDQRKL 440
Query: 497 LHKYHSVRPLHKYHS 541
K +S+ + K HS
Sbjct: 441 QEKGNSLLDVGKLHS 455
>Z81455-4|CAJ76928.1| 680|Caenorhabditis elegans Hypothetical
protein B0399.1d protein.
Length = 680
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +2
Query: 317 TNQHGRATKSTLKDKFLFLITKIPLHKYHSVRPLHKYHSVRPLHKYHSVRPLHKYHSVRP 496
TNQ A S L++ + K LHK +R H H R LH + R + K+ +
Sbjct: 453 TNQRKNAAASVLQETWFIHKYKKALHKGDDLRLRH--HQRRFLHSINEFRRI-KWDQRKL 509
Query: 497 LHKYHSVRPLHKYHS 541
K +S+ + K HS
Sbjct: 510 QEKGNSLLDVGKLHS 524
>Z81455-2|CAD54123.1| 745|Caenorhabditis elegans Hypothetical
protein B0399.1b protein.
Length = 745
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +2
Query: 317 TNQHGRATKSTLKDKFLFLITKIPLHKYHSVRPLHKYHSVRPLHKYHSVRPLHKYHSVRP 496
TNQ A S L++ + K LHK +R H H R LH + R + K+ +
Sbjct: 518 TNQRKNAAASVLQETWFIHKYKKALHKGDDLRLRH--HQRRFLHSINEFRRI-KWDQRKL 574
Query: 497 LHKYHSVRPLHKYHS 541
K +S+ + K HS
Sbjct: 575 QEKGNSLLDVGKLHS 589
>Z81455-1|CAB03807.2| 792|Caenorhabditis elegans Hypothetical
protein B0399.1a protein.
Length = 792
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +2
Query: 317 TNQHGRATKSTLKDKFLFLITKIPLHKYHSVRPLHKYHSVRPLHKYHSVRPLHKYHSVRP 496
TNQ A S L++ + K LHK +R H H R LH + R + K+ +
Sbjct: 565 TNQRKNAAASVLQETWFIHKYKKALHKGDDLRLRH--HQRRFLHSINEFRRI-KWDQRKL 621
Query: 497 LHKYHSVRPLHKYHS 541
K +S+ + K HS
Sbjct: 622 QEKGNSLLDVGKLHS 636
>U40059-3|AAP68936.1| 280|Caenorhabditis elegans Forkhead
transcription factor familyprotein 9, isoform b protein.
Length = 280
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 614 YHSVRPLHKYHSVRPLHK--YHSVRHNITLDNILIRTP 721
Y +R LH Y+ RP +S+RHN++L + ++ P
Sbjct: 73 YQVIRLLHPYYRHRPDQWGWQNSIRHNLSLHDCFVKLP 110
>U40059-2|AAA81139.2| 300|Caenorhabditis elegans Forkhead
transcription factor familyprotein 9, isoform a protein.
Length = 300
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 614 YHSVRPLHKYHSVRPLHK--YHSVRHNITLDNILIRTP 721
Y +R LH Y+ RP +S+RHN++L + ++ P
Sbjct: 93 YQVIRLLHPYYRHRPDQWGWQNSIRHNLSLHDCFVKLP 130
>AL032637-27|CAN86620.1| 695|Caenorhabditis elegans Hypothetical
protein B0399.1f protein.
Length = 695
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +2
Query: 317 TNQHGRATKSTLKDKFLFLITKIPLHKYHSVRPLHKYHSVRPLHKYHSVRPLHKYHSVRP 496
TNQ A S L++ + K LHK +R H H R LH + R + K+ +
Sbjct: 468 TNQRKNAAASVLQETWFIHKYKKALHKGDDLRLRH--HQRRFLHSINEFRRI-KWDQRKL 524
Query: 497 LHKYHSVRPLHKYHS 541
K +S+ + K HS
Sbjct: 525 QEKGNSLLDVGKLHS 539
>AL032637-26|CAJ90512.1| 611|Caenorhabditis elegans Hypothetical
protein B0399.1e protein.
Length = 611
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +2
Query: 317 TNQHGRATKSTLKDKFLFLITKIPLHKYHSVRPLHKYHSVRPLHKYHSVRPLHKYHSVRP 496
TNQ A S L++ + K LHK +R H H R LH + R + K+ +
Sbjct: 384 TNQRKNAAASVLQETWFIHKYKKALHKGDDLRLRH--HQRRFLHSINEFRRI-KWDQRKL 440
Query: 497 LHKYHSVRPLHKYHS 541
K +S+ + K HS
Sbjct: 441 QEKGNSLLDVGKLHS 455
>AL032637-25|CAJ76956.1| 680|Caenorhabditis elegans Hypothetical
protein B0399.1d protein.
Length = 680
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +2
Query: 317 TNQHGRATKSTLKDKFLFLITKIPLHKYHSVRPLHKYHSVRPLHKYHSVRPLHKYHSVRP 496
TNQ A S L++ + K LHK +R H H R LH + R + K+ +
Sbjct: 453 TNQRKNAAASVLQETWFIHKYKKALHKGDDLRLRH--HQRRFLHSINEFRRI-KWDQRKL 509
Query: 497 LHKYHSVRPLHKYHS 541
K +S+ + K HS
Sbjct: 510 QEKGNSLLDVGKLHS 524
>AL032637-24|CAD54171.1| 745|Caenorhabditis elegans Hypothetical
protein B0399.1b protein.
Length = 745
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +2
Query: 317 TNQHGRATKSTLKDKFLFLITKIPLHKYHSVRPLHKYHSVRPLHKYHSVRPLHKYHSVRP 496
TNQ A S L++ + K LHK +R H H R LH + R + K+ +
Sbjct: 518 TNQRKNAAASVLQETWFIHKYKKALHKGDDLRLRH--HQRRFLHSINEFRRI-KWDQRKL 574
Query: 497 LHKYHSVRPLHKYHS 541
K +S+ + K HS
Sbjct: 575 QEKGNSLLDVGKLHS 589
>AL032637-23|CAA21625.2| 792|Caenorhabditis elegans Hypothetical
protein B0399.1a protein.
Length = 792
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +2
Query: 317 TNQHGRATKSTLKDKFLFLITKIPLHKYHSVRPLHKYHSVRPLHKYHSVRPLHKYHSVRP 496
TNQ A S L++ + K LHK +R H H R LH + R + K+ +
Sbjct: 565 TNQRKNAAASVLQETWFIHKYKKALHKGDDLRLRH--HQRRFLHSINEFRRI-KWDQRKL 621
Query: 497 LHKYHSVRPLHKYHS 541
K +S+ + K HS
Sbjct: 622 QEKGNSLLDVGKLHS 636
>AL032637-1|CAD54169.1| 555|Caenorhabditis elegans Hypothetical
protein B0399.1c protein.
Length = 555
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +2
Query: 317 TNQHGRATKSTLKDKFLFLITKIPLHKYHSVRPLHKYHSVRPLHKYHSVRPLHKYHSVRP 496
TNQ A S L++ + K LHK +R H H R LH + R + K+ +
Sbjct: 328 TNQRKNAAASVLQETWFIHKYKKALHKGDDLRLRH--HQRRFLHSINEFRRI-KWDQRKL 384
Query: 497 LHKYHSVRPLHKYHS 541
K +S+ + K HS
Sbjct: 385 QEKGNSLLDVGKLHS 399
>AF036705-7|AAB95174.1| 324|Caenorhabditis elegans Hypothetical
protein F37C4.8 protein.
Length = 324
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +2
Query: 122 RELKDRDVNDADVTLFKNIPSAFLLRHQKWDHMPPPLSNNLETI*PYRRKKTTPQQQPMS 301
R++ D ++ DA+ T + P L R + +H P +++N + P R+ + P+Q+ +
Sbjct: 222 RKIGDGNIVDANFT-YNGKPVEKLKRVKDCEHQPKRINSNKIFLDPKLRRSSFPRQKMSN 280
Query: 302 LY 307
Y
Sbjct: 281 CY 282
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,839,441
Number of Sequences: 27780
Number of extensions: 413644
Number of successful extensions: 1529
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1441
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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