Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt29m01
(735 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 24 1.3
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 24 1.3
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 24 1.7
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 23 2.3
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 22 5.2
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 9.1
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 21 9.1
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 9.1
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 24.2 bits (50), Expect = 1.3
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +3
Query: 243 WRPFNHIGGRRLPPSN 290
W P + G+R+PP+N
Sbjct: 148 WHPGKIVNGKRVPPTN 163
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 24.2 bits (50), Expect = 1.3
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +3
Query: 243 WRPFNHIGGRRLPPSN 290
W P + G+R+PP+N
Sbjct: 148 WHPGKIVNGKRVPPTN 163
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 23.8 bits (49), Expect = 1.7
Identities = 9/21 (42%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = -3
Query: 274 LLPPIWLNG-LQVVAERRRHV 215
LLPP+W+ G + +A RH+
Sbjct: 223 LLPPVWVGGESEALARLERHL 243
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 23.4 bits (48), Expect = 2.3
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 260 YRRKKTTPQQQPMSLYI 310
YRRKKT P ++ S YI
Sbjct: 319 YRRKKTVPLKKVNSKYI 335
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 669 YLCSGRTLWYLCSG 628
+LC G WYL SG
Sbjct: 232 FLCKGDGKWYLPSG 245
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 642 YLCSGRTLWYLCSG 601
+LC G WYL SG
Sbjct: 232 FLCKGDGKWYLPSG 245
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 615 YLCSGRTLWYLCSG 574
+LC G WYL SG
Sbjct: 232 FLCKGDGKWYLPSG 245
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 588 YLCSGRTLWYLCSG 547
+LC G WYL SG
Sbjct: 232 FLCKGDGKWYLPSG 245
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 561 YLCSGRTLWYLCSG 520
+LC G WYL SG
Sbjct: 232 FLCKGDGKWYLPSG 245
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 534 YLCSGRTLWYLCSG 493
+LC G WYL SG
Sbjct: 232 FLCKGDGKWYLPSG 245
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 507 YLCSGRTLWYLCSG 466
+LC G WYL SG
Sbjct: 232 FLCKGDGKWYLPSG 245
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 480 YLCSGRTLWYLCSG 439
+LC G WYL SG
Sbjct: 232 FLCKGDGKWYLPSG 245
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 453 YLCSGRTLWYLCSG 412
+LC G WYL SG
Sbjct: 232 FLCKGDGKWYLPSG 245
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 426 YLCSGRTLWYLCSG 385
+LC G WYL SG
Sbjct: 232 FLCKGDGKWYLPSG 245
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.4 bits (43), Expect = 9.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 61 SCNIRSSREVLFWKPK 108
S +I SS E FW+PK
Sbjct: 375 SSSISSSEENDFWQPK 390
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.4 bits (43), Expect = 9.1
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1
Query: 214 SHAASAQQQPGDH 252
S AAS Q QPG H
Sbjct: 210 SQAASQQSQPGMH 222
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.4 bits (43), Expect = 9.1
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -3
Query: 115 THIWASKTKLHENCVYCTRSITTLQRD 35
T++W KL ++ YC R I R+
Sbjct: 458 TYLWEFLLKLLQDREYCPRYIKWTNRE 484
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,276
Number of Sequences: 438
Number of extensions: 5148
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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