Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt29l16
         (749 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81475-5|CAH04698.1|  130|Caenorhabditis elegans Hypothetical pr...    50   1e-06
U80836-4|AAB37891.2|  329|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p...    29   4.7  
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr...    29   4.7  
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos...    29   4.7  
AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ...    28   8.1  

>Z81475-5|CAH04698.1|  130|Caenorhabditis elegans Hypothetical
           protein C24H11.9 protein.
          Length = 130

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
 Frame = +1

Query: 148 MADRLTQLQDTINQQAENFCNSIGILQQFSLPSKFPGFERXXXXXXXXXXXXEDYAVLFA 327
           MADR+TQLQD IN+ A    N+IG+LQ  + P +F    +            E    +FA
Sbjct: 1   MADRMTQLQDMINEMAGLMTNAIGVLQATAPPCEFGAISQ--------ELEDEPNCAIFA 52

Query: 328 ALISRCAKDIDTXXXXXXXXXXXXXXQV-QSLRRLEAENKEAAEQLEEVVRQGEILLEKI 504
           A I++ AK+I+               +V + + + + + +E   +L  +V     L+  +
Sbjct: 53  AGIAKAAKNIEILIDSFPIEAGNQEAEVEEKMIKNDEKQREKVNELVGLVGDSNRLVGVV 112

Query: 505 QGALSDIAQCQL 540
           Q  L++I++ Q+
Sbjct: 113 QKKLAEISKTQM 124


>U80836-4|AAB37891.2|  329|Caenorhabditis elegans Hypothetical
           protein B0432.6 protein.
          Length = 329

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
 Frame = +1

Query: 412 QSLRRLE---AENKEAAEQLEEVVRQGEILLEKIQGALSDIAQCQLDMQNPAL 561
           QS+ R+E   AEN+E  ++ EE V + E+L E I+    ++   Q DM+   L
Sbjct: 200 QSVTRIELFLAENRELKQEFEEKVVECEVLKEHIRQIDLELKNKQSDMERALL 252


>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
            protein F20G4.3 protein.
          Length = 2003

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = +1

Query: 406  QVQSLRRLEAENKEAAEQLEEVVRQGEILLEKIQGALSDIAQCQLDMQN 552
            Q ++LRR+E +  E  + LEE  RQGE   + +    + I Q +  +++
Sbjct: 1847 QGRTLRRMETKMAEMQQMLEEEKRQGESNRQAVDRQNARIRQLRTQLED 1895


>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
            F20G4.3 protein.
          Length = 2003

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = +1

Query: 406  QVQSLRRLEAENKEAAEQLEEVVRQGEILLEKIQGALSDIAQCQLDMQN 552
            Q ++LRR+E +  E  + LEE  RQGE   + +    + I Q +  +++
Sbjct: 1847 QGRTLRRMETKMAEMQQMLEEEKRQGESNRQAVDRQNARIRQLRTQLED 1895


>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
            heavy chain II protein.
          Length = 2003

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = +1

Query: 406  QVQSLRRLEAENKEAAEQLEEVVRQGEILLEKIQGALSDIAQCQLDMQN 552
            Q ++LRR+E +  E  + LEE  RQGE   + +    + I Q +  +++
Sbjct: 1847 QGRTLRRMETKMAEMQQMLEEEKRQGESNRQAVDRQNARIRQLRTQLED 1895


>AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical
            protein Y80D3A.8 protein.
          Length = 1293

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1

Query: 406  QVQSLRRLEAENKEAAEQLEEVVRQGE 486
            +V+  R+ EAE+KE  EQL   VR+ E
Sbjct: 921  EVEEQRKREAEDKEKIEQLNAKVREKE 947


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,409,908
Number of Sequences: 27780
Number of extensions: 267741
Number of successful extensions: 710
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)