Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt29l06
         (770 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC005149-1|AAH05149.1|  580|Homo sapiens mucolipin 1 protein.          34   0.49 
AK222673-1|BAD96393.1|  580|Homo sapiens mucolipin 1 variant pro...    34   0.49 
AK026102-1|BAB15360.1|  580|Homo sapiens protein ( Homo sapiens ...    34   0.49 
AJ293970-1|CAC08215.1|  580|Homo sapiens mucolipidin protein.          34   0.49 
AJ293659-1|CAC07813.1|  545|Homo sapiens mucolipidin protein.          34   0.49 
AF305579-1|AAG42242.1|  581|Homo sapiens mucolipin 1 protein.          34   0.49 
AF287270-1|AAG00798.1|  580|Homo sapiens mucolipin protein.            34   0.49 
AF287269-1|AAG00797.1|  580|Homo sapiens mucolipin protein.            34   0.49 
AF249319-1|AAG10422.1|  580|Homo sapiens mucolipidosis type IV p...    34   0.49 
AK128083-1|BAC87264.1|  225|Homo sapiens protein ( Homo sapiens ...    32   2.0  
AK091092-1|BAC03581.1|  145|Homo sapiens protein ( Homo sapiens ...    30   8.0  

>BC005149-1|AAH05149.1|  580|Homo sapiens mucolipin 1 protein.
          Length = 580

 Score = 34.3 bits (75), Expect = 0.49
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 157 CIVCFCILFFIVCVGLLLYL-FFHLYNTLSADAKIVVES*LKRVCVCVVI 303
           C +       +V VG++ YL FFH YN L A  ++ + S + R C CV +
Sbjct: 386 CSILLGTSTLLVWVGVIRYLTFFHNYNILIATLRVALPS-VMRFCCCVAV 434


>AK222673-1|BAD96393.1|  580|Homo sapiens mucolipin 1 variant
           protein.
          Length = 580

 Score = 34.3 bits (75), Expect = 0.49
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 157 CIVCFCILFFIVCVGLLLYL-FFHLYNTLSADAKIVVES*LKRVCVCVVI 303
           C +       +V VG++ YL FFH YN L A  ++ + S + R C CV +
Sbjct: 386 CSILLGTSTLLVWVGVIRYLTFFHNYNILIATLRVALPS-VMRFCCCVAV 434


>AK026102-1|BAB15360.1|  580|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22449 fis, clone HRC09609. ).
          Length = 580

 Score = 34.3 bits (75), Expect = 0.49
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 157 CIVCFCILFFIVCVGLLLYL-FFHLYNTLSADAKIVVES*LKRVCVCVVI 303
           C +       +V VG++ YL FFH YN L A  ++ + S + R C CV +
Sbjct: 386 CSILLGTSTLLVWVGVIRYLTFFHNYNILIATLRVALPS-VMRFCCCVAV 434


>AJ293970-1|CAC08215.1|  580|Homo sapiens mucolipidin protein.
          Length = 580

 Score = 34.3 bits (75), Expect = 0.49
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 157 CIVCFCILFFIVCVGLLLYL-FFHLYNTLSADAKIVVES*LKRVCVCVVI 303
           C +       +V VG++ YL FFH YN L A  ++ + S + R C CV +
Sbjct: 386 CSILLGTSTLLVWVGVIRYLTFFHNYNILIATLRVALPS-VMRFCCCVAV 434


>AJ293659-1|CAC07813.1|  545|Homo sapiens mucolipidin protein.
          Length = 545

 Score = 34.3 bits (75), Expect = 0.49
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 157 CIVCFCILFFIVCVGLLLYL-FFHLYNTLSADAKIVVES*LKRVCVCVVI 303
           C +       +V VG++ YL FFH YN L A  ++ + S + R C CV +
Sbjct: 351 CSILLGTSTLLVWVGVIRYLTFFHNYNILIATLRVALPS-VMRFCCCVAV 399


>AF305579-1|AAG42242.1|  581|Homo sapiens mucolipin 1 protein.
          Length = 581

 Score = 34.3 bits (75), Expect = 0.49
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 157 CIVCFCILFFIVCVGLLLYL-FFHLYNTLSADAKIVVES*LKRVCVCVVI 303
           C +       +V VG++ YL FFH YN L A  ++ + S + R C CV +
Sbjct: 387 CSILLGTSTLLVWVGVIRYLTFFHNYNILIATLRVALPS-VMRFCCCVAV 435


>AF287270-1|AAG00798.1|  580|Homo sapiens mucolipin protein.
          Length = 580

 Score = 34.3 bits (75), Expect = 0.49
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 157 CIVCFCILFFIVCVGLLLYL-FFHLYNTLSADAKIVVES*LKRVCVCVVI 303
           C +       +V VG++ YL FFH YN L A  ++ + S + R C CV +
Sbjct: 386 CSILLGTSTLLVWVGVIRYLTFFHNYNILIATLRVALPS-VMRFCCCVAV 434


>AF287269-1|AAG00797.1|  580|Homo sapiens mucolipin protein.
          Length = 580

 Score = 34.3 bits (75), Expect = 0.49
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 157 CIVCFCILFFIVCVGLLLYL-FFHLYNTLSADAKIVVES*LKRVCVCVVI 303
           C +       +V VG++ YL FFH YN L A  ++ + S + R C CV +
Sbjct: 386 CSILLGTSTLLVWVGVIRYLTFFHNYNILIATLRVALPS-VMRFCCCVAV 434


>AF249319-1|AAG10422.1|  580|Homo sapiens mucolipidosis type IV
           protein protein.
          Length = 580

 Score = 34.3 bits (75), Expect = 0.49
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 157 CIVCFCILFFIVCVGLLLYL-FFHLYNTLSADAKIVVES*LKRVCVCVVI 303
           C +       +V VG++ YL FFH YN L A  ++ + S + R C CV +
Sbjct: 386 CSILLGTSTLLVWVGVIRYLTFFHNYNILIATLRVALPS-VMRFCCCVAV 434


>AK128083-1|BAC87264.1|  225|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46204 fis, clone TESTI4009501. ).
          Length = 225

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = -1

Query: 296 THTHTRFSQLSTTILASADNVLYK*KKRYSNRPTHTMKNKIQKHT-IHSEQKRRTLSI 126
           TH HT  +Q+ T IL  +    +     +++  THT  +    HT  HS    RTL++
Sbjct: 96  THVHTPHTQMHTRILTLSHMHTHAHTHAHTHGHTHTRAHSTHAHTHAHSHYHTRTLTL 153


>AK091092-1|BAC03581.1|  145|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33773 fis, clone BRSSN2000197. ).
          Length = 145

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = +1

Query: 148 CSECIVCFC---ILFFIVC-VGLLLYLFFHLYNTLSADAKIV 261
           C + + C C    L+F+ C VGL +YLFF + + L   + IV
Sbjct: 65  CEKSVCCSCPRPFLYFLFCSVGLCVYLFFSMTHCLDYCSIIV 106


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,272,871
Number of Sequences: 237096
Number of extensions: 2046512
Number of successful extensions: 3280
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3279
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9311505506
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)