Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt29k05
(323 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L03785-1|AAA59890.1| 173|Homo sapiens myosin regulatory light c... 32 0.35
BC040050-1|AAH40050.1| 132|Homo sapiens MYL5 protein protein. 32 0.35
BX538169-1|CAD98046.1| 914|Homo sapiens hypothetical protein pr... 29 3.2
BC117177-1|AAI17178.1| 914|Homo sapiens transmembrane and tetra... 29 3.2
BC117175-1|AAI17176.1| 914|Homo sapiens transmembrane and tetra... 29 3.2
BC023566-1|AAH23566.1| 740|Homo sapiens RAS and EF-hand domain ... 29 3.2
AL499602-2|CAH70679.1| 189|Homo sapiens RAS and EF-hand domain ... 29 3.2
AL499602-1|CAH70678.1| 740|Homo sapiens RAS and EF-hand domain ... 29 3.2
AK074973-1|BAC11325.1| 815|Homo sapiens BUNIT (EC 2.4.1.-). pr... 29 3.2
AK056176-1|BAB71112.1| 189|Homo sapiens protein ( Homo sapiens ... 29 3.2
AJ697717-1|CAG26973.1| 914|Homo sapiens SMILE protein protein. 29 3.2
BC065237-1|AAH65237.1| 812|Homo sapiens chromosome 13 open read... 28 7.4
AL845154-1|CAI23600.1| 812|Homo sapiens chromosome 13 open read... 28 7.4
AK074894-1|BAC11273.1| 740|Homo sapiens protein ( Homo sapiens ... 28 7.4
AB058705-1|BAB47431.1| 821|Homo sapiens KIAA1802 protein protein. 28 7.4
>L03785-1|AAA59890.1| 173|Homo sapiens myosin regulatory light
chain protein.
Length = 173
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = +1
Query: 4 SNDGSIDSEEFSSVYASFGLDKAEAASAFQKLSKGKSSVSFAEFQELFKEYFASED 171
+ DG ID E+ YAS G + L + ++F F LF E + D
Sbjct: 45 NRDGFIDKEDLKDTYASLGKTNVKDDELDAMLKEASGPINFTMFLNLFGEKLSGTD 100
>BC040050-1|AAH40050.1| 132|Homo sapiens MYL5 protein protein.
Length = 132
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = +1
Query: 4 SNDGSIDSEEFSSVYASFGLDKAEAASAFQKLSKGKSSVSFAEFQELFKEYFASED 171
+ DG ID E+ YAS G + L + ++F F LF E + D
Sbjct: 4 NRDGFIDKEDLKDTYASLGKTNVKDDELDAMLKEASGPINFTMFLNLFGEKLSGTD 59
>BX538169-1|CAD98046.1| 914|Homo sapiens hypothetical protein
protein.
Length = 914
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +2
Query: 74 KLHQLFRSYPKASHLSPSLNSRNCSKNISLLRM*TPLETLSSGRPASEV*RTDCDLNYDL 253
+L + + Y +A + P S+ LL+M PL+ + A E+ R + DL Y+L
Sbjct: 544 RLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWYNL 603
Query: 254 CLEFVGL 274
+ + L
Sbjct: 604 AIVHIEL 610
>BC117177-1|AAI17178.1| 914|Homo sapiens transmembrane and
tetratricopeptide repeat containing 3 protein.
Length = 914
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +2
Query: 74 KLHQLFRSYPKASHLSPSLNSRNCSKNISLLRM*TPLETLSSGRPASEV*RTDCDLNYDL 253
+L + + Y +A + P S+ LL+M PL+ + A E+ R + DL Y+L
Sbjct: 544 RLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWYNL 603
Query: 254 CLEFVGL 274
+ + L
Sbjct: 604 AIVHIEL 610
>BC117175-1|AAI17176.1| 914|Homo sapiens transmembrane and
tetratricopeptide repeat containing 3 protein.
Length = 914
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +2
Query: 74 KLHQLFRSYPKASHLSPSLNSRNCSKNISLLRM*TPLETLSSGRPASEV*RTDCDLNYDL 253
+L + + Y +A + P S+ LL+M PL+ + A E+ R + DL Y+L
Sbjct: 544 RLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWYNL 603
Query: 254 CLEFVGL 274
+ + L
Sbjct: 604 AIVHIEL 610
>BC023566-1|AAH23566.1| 740|Homo sapiens RAS and EF-hand domain
containing protein.
Length = 740
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 1 ASNDGSIDSEEFSSVYASFGLDKAEAASAFQKLSKGK-SSVSFAEFQELF 147
A+ G ++ EEF ++ + A+A + FQ+L + +++F EF F
Sbjct: 22 ANRSGRLEREEFRALCTELRVRPADAEAVFQRLDADRDGAITFQEFARGF 71
>AL499602-2|CAH70679.1| 189|Homo sapiens RAS and EF-hand domain
containing protein.
Length = 189
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 1 ASNDGSIDSEEFSSVYASFGLDKAEAASAFQKLSKGK-SSVSFAEFQELF 147
A+ G ++ EEF ++ + A+A + FQ+L + +++F EF F
Sbjct: 22 ANRSGRLEREEFRALCTELRVRPADAEAVFQRLDADRDGAITFQEFARGF 71
>AL499602-1|CAH70678.1| 740|Homo sapiens RAS and EF-hand domain
containing protein.
Length = 740
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 1 ASNDGSIDSEEFSSVYASFGLDKAEAASAFQKLSKGK-SSVSFAEFQELF 147
A+ G ++ EEF ++ + A+A + FQ+L + +++F EF F
Sbjct: 22 ANRSGRLEREEFRALCTELRVRPADAEAVFQRLDADRDGAITFQEFARGF 71
>AK074973-1|BAC11325.1| 815|Homo sapiens BUNIT (EC 2.4.1.-).
protein.
Length = 815
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +2
Query: 74 KLHQLFRSYPKASHLSPSLNSRNCSKNISLLRM*TPLETLSSGRPASEV*RTDCDLNYDL 253
+L + + Y +A + P S+ LL+M PL+ + A E+ R + DL Y+L
Sbjct: 484 RLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWYNL 543
Query: 254 CLEFVGL 274
+ + L
Sbjct: 544 AIVHIEL 550
>AK056176-1|BAB71112.1| 189|Homo sapiens protein ( Homo sapiens
cDNA FLJ31614 fis, clone NT2RI2002970. ).
Length = 189
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 1 ASNDGSIDSEEFSSVYASFGLDKAEAASAFQKLSKGK-SSVSFAEFQELF 147
A+ G ++ EEF ++ + A+A + FQ+L + +++F EF F
Sbjct: 22 ANRSGRLEREEFRALCTELRVRPADAEAVFQRLDADRDGAITFQEFARGF 71
>AJ697717-1|CAG26973.1| 914|Homo sapiens SMILE protein protein.
Length = 914
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +2
Query: 74 KLHQLFRSYPKASHLSPSLNSRNCSKNISLLRM*TPLETLSSGRPASEV*RTDCDLNYDL 253
+L + + Y +A + P S+ LL+M PL+ + A E+ R + DL Y+L
Sbjct: 544 RLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWYNL 603
Query: 254 CLEFVGL 274
+ + L
Sbjct: 604 AIVHIEL 610
>BC065237-1|AAH65237.1| 812|Homo sapiens chromosome 13 open reading
frame 8 protein.
Length = 812
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 215 QKLVFPKTKFPGAFTSSEAKYSLNNSWNSAKETDDLP 105
QK VFP+T+ PG SE+ + ++ W D P
Sbjct: 489 QKPVFPETRKPGPSGPSESPKAASDIWKPVLSIDTEP 525
>AL845154-1|CAI23600.1| 812|Homo sapiens chromosome 13 open reading
frame 8 protein.
Length = 812
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 215 QKLVFPKTKFPGAFTSSEAKYSLNNSWNSAKETDDLP 105
QK VFP+T+ PG SE+ + ++ W D P
Sbjct: 489 QKPVFPETRKPGPSGPSESPKAASDIWKPVLSIDTEP 525
>AK074894-1|BAC11273.1| 740|Homo sapiens protein ( Homo sapiens
cDNA FLJ90413 fis, clone NT2RP3000063, weakly similar to
NEUROFILAMENT TRIPLET H PROTEIN. ).
Length = 740
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 215 QKLVFPKTKFPGAFTSSEAKYSLNNSWNSAKETDDLP 105
QK VFP+T+ PG SE+ + ++ W D P
Sbjct: 417 QKPVFPETRKPGPSGPSESPKAASDIWKPVLSIDTEP 453
>AB058705-1|BAB47431.1| 821|Homo sapiens KIAA1802 protein protein.
Length = 821
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 215 QKLVFPKTKFPGAFTSSEAKYSLNNSWNSAKETDDLP 105
QK VFP+T+ PG SE+ + ++ W D P
Sbjct: 498 QKPVFPETRKPGPSGPSESPKAASDIWKPVLSIDTEP 534
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,876,567
Number of Sequences: 237096
Number of extensions: 618318
Number of successful extensions: 1231
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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