Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt29j23
(369 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0131 + 27898028-27898042,27898159-27898274,27898361-278984... 113 3e-26
01_06_0180 - 27260099-27260440,27261236-27261350,27261403-272615... 112 7e-26
01_06_0730 - 31552747-31553088,31553583-31553646,31553743-315538... 111 2e-25
12_02_0133 - 14057469-14057497,14057516-14057581,14057770-140583... 29 0.86
12_01_0752 - 6798938-6799312,6799628-6799768,6800257-6800325,680... 29 0.86
02_04_0185 - 20748206-20748405,20749067-20749232,20749373-207494... 28 2.6
03_01_0219 + 1731267-1731728,1732148-1732235,1732330-1732417,173... 27 3.5
11_06_0007 - 19171122-19172036 27 4.6
07_03_0033 + 12656255-12656297,12657402-12657408,12657484-126580... 27 4.6
09_06_0150 - 21225086-21225511,21225775-21226125,21227180-212277... 27 6.1
11_06_0557 - 24955837-24956214,24957225-24957395,24957576-249576... 26 8.1
11_05_0058 + 18719852-18719929,18720032-18720889,18720969-187211... 26 8.1
07_03_0945 - 22791754-22791863,22792295-22792367,22792457-227925... 26 8.1
06_02_0187 + 12805788-12807007,12807059-12807186,12807811-128078... 26 8.1
05_01_0190 + 1366791-1366817,1367536-1367616,1367858-1367900,136... 26 8.1
02_04_0364 + 22374735-22374749,22374903-22375076,22377858-223779... 26 8.1
01_06_0282 - 28160321-28160417,28160585-28160653,28161090-281611... 26 8.1
>05_07_0131 +
27898028-27898042,27898159-27898274,27898361-27898424,
27899450-27899791
Length = 178
Score = 113 bits (273), Expect = 3e-26
Identities = 54/108 (50%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Frame = +1
Query: 1 SPIKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVE 180
+P IKN+GIWLRY+SR+G HNMY+EYRD ++ GAV Q Y +M +RHR R IQIIK
Sbjct: 70 NPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTA 129
Query: 181 VIKAAACRRPQVKQFHNSTIRFPL---PKRVHHYKRLNTFAYKRPSTY 315
+ C+R KQFHNS I+FPL R K TF RP+ +
Sbjct: 130 TVHFKLCKRDNTKQFHNSNIKFPLVYRKVRPPTRKLKTTFKASRPNLF 177
>01_06_0180 -
27260099-27260440,27261236-27261350,27261403-27261518,
27261594-27261608
Length = 195
Score = 112 bits (270), Expect = 7e-26
Identities = 53/108 (49%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Frame = +1
Query: 1 SPIKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVE 180
+P IKN+GIWLRY+SR+G HNMY+EYRD ++ GAV Q Y +M +RHR R IQIIK
Sbjct: 87 NPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTA 146
Query: 181 VIKAAACRRPQVKQFHNSTIRFPL---PKRVHHYKRLNTFAYKRPSTY 315
+ C+R KQFHN +I+FPL R K TF RP+ +
Sbjct: 147 TVHFKLCKRDNTKQFHNGSIKFPLVYRKVRPPTRKLKTTFKASRPNLF 194
>01_06_0730 -
31552747-31553088,31553583-31553646,31553743-31553858,
31553964-31553978
Length = 178
Score = 111 bits (266), Expect = 2e-25
Identities = 53/108 (49%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Frame = +1
Query: 1 SPIKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVE 180
+P IKN+GIWLRY+SR+G HNMY+EYRD ++ GAV Q Y +M +RHR R IQIIK
Sbjct: 70 NPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTA 129
Query: 181 VIKAAACRRPQVKQFHNSTIRFPL---PKRVHHYKRLNTFAYKRPSTY 315
+ C+R KQFH S I+FPL R K TF RP+ +
Sbjct: 130 TVHFKLCKRDNTKQFHKSDIKFPLVYRKVRPPTRKLKTTFKASRPNLF 177
>12_02_0133 - 14057469-14057497,14057516-14057581,14057770-14058363,
14058450-14058570,14058926-14059320,14059410-14059534,
14059646-14059876,14060012-14060484,14060587-14060693,
14060842-14061172,14061222-14061250,14061345-14061901,
14062170-14062255,14062344-14062406,14062646-14063001,
14063101-14063356
Length = 1272
Score = 29.5 bits (63), Expect = 0.86
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +3
Query: 141 QSPSSFNTDYQSGSNQGCCVSPSTGQTVPQQHHQIPIAQTCAPLQET 281
Q P S T+YQ SN + Q + HHQ+PI + + T
Sbjct: 950 QCPQSTETNYQRCSNGETESNQPVSQNELEDHHQVPITASSSTNNST 996
>12_01_0752 -
6798938-6799312,6799628-6799768,6800257-6800325,
6800407-6800454,6801740-6801836,6801922-6802001,
6802099-6802170,6802335-6802429,6802853-6802934,
6805476-6805853
Length = 478
Score = 29.5 bits (63), Expect = 0.86
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = +3
Query: 159 NTDYQSGSNQGCC----VSPSTGQTVPQQHHQIPIAQTCAP 269
N + G N+G P+ QT P+QH Q+PI T P
Sbjct: 406 NNHHHQGGNRGGAHHVGTPPNQQQTKPEQHPQLPIGATKQP 446
>02_04_0185 -
20748206-20748405,20749067-20749232,20749373-20749471,
20749487-20749561,20749663-20749743,20750121-20750274,
20750330-20750425,20750518-20750727,20750746-20750957
Length = 430
Score = 27.9 bits (59), Expect = 2.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 226 HNSTIRFPLPKRVHHYKRLNTFAY 297
H+ +R PLP +HH TFAY
Sbjct: 221 HDPEVRDPLPLTIHHLPIAVTFAY 244
>03_01_0219 +
1731267-1731728,1732148-1732235,1732330-1732417,
1732528-1732573,1732687-1732785,1734363-1734431,
1735706-1736036,1736123-1736256,1736400-1737251
Length = 722
Score = 27.5 bits (58), Expect = 3.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 144 SPSSFNTDYQSGSNQGCCVSPSTGQTVPQQHH 239
S + T ++G+N C STGQT P Q H
Sbjct: 561 SATKLATKCENGANVSCDGVGSTGQTPPLQQH 592
>11_06_0007 - 19171122-19172036
Length = 304
Score = 27.1 bits (57), Expect = 4.6
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -2
Query: 227 WNCLTCGRRHAAALITSTLIICI 159
W C CG R AA L+ +C+
Sbjct: 252 WGCKACGEREAAVLLLPCRHLCL 274
>07_03_0033 +
12656255-12656297,12657402-12657408,12657484-12658016,
12658106-12658224,12658329-12658688,12659602-12659784
Length = 414
Score = 27.1 bits (57), Expect = 4.6
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +3
Query: 174 SGSNQGCCVSPSTGQTVPQQHHQIPIAQTCAPLQET*YLR 293
+G N G SP PQ H I+ CA +QE Y R
Sbjct: 364 TGVNVGRQRSPQVTAPSPQVHEPPSISPLCAAIQEPKYTR 403
>09_06_0150 -
21225086-21225511,21225775-21226125,21227180-21227718,
21227813-21227929,21228038-21228290
Length = 561
Score = 26.6 bits (56), Expect = 6.1
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 221 SSTTAPSDSHCPNVCTTTRDLIPSRTRGLALTS 319
S + SD P TTTR S +RG+A +S
Sbjct: 25 SESETSSDCSAPTTTTTTRRFASSSSRGVASSS 57
>11_06_0557 -
24955837-24956214,24957225-24957395,24957576-24957635,
24958419-24958623,24958710-24958953,24959103-24959394,
24959734-24960828,24960915-24961409,24961665-24961823,
24961893-24962387
Length = 1197
Score = 26.2 bits (55), Expect = 8.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 180 SNQGCCVSPSTGQTVPQQHHQIPIAQTCAPLQET 281
S QG +P+T +TVPQ + P +T P+ T
Sbjct: 105 SVQGAPRAPATAETVPQGSPRGPGVRTVGPVPST 138
>11_05_0058 +
18719852-18719929,18720032-18720889,18720969-18721118,
18722248-18722496,18722531-18722575,18722576-18722638
Length = 480
Score = 26.2 bits (55), Expect = 8.1
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 223 FHNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 318
F +S P+P V H K L F Y RPS F
Sbjct: 151 FPSSNFATPMPTSVEHLKLL--FCYLRPSPTF 180
>07_03_0945 -
22791754-22791863,22792295-22792367,22792457-22792552,
22793268-22793331,22793957-22794008,22794525-22794622,
22795108-22795166,22795981-22796013
Length = 194
Score = 26.2 bits (55), Expect = 8.1
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +1
Query: 28 IWLRYESRSGVHNMYREY 81
+WL++ S SG ++YR Y
Sbjct: 94 VWLQFPSNSGAKHVYRRY 111
>06_02_0187 +
12805788-12807007,12807059-12807186,12807811-12807859,
12808508-12808853
Length = 580
Score = 26.2 bits (55), Expect = 8.1
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 185 SRLLRVAVHRSNSSTTAPSDSHCPNVCTTTRDLIPSRTR 301
S L A S + T P+ + V TTR +P+R R
Sbjct: 80 SFLSTAAATNSTDTATVPTTTAAARVAATTRPTLPARQR 118
>05_01_0190 +
1366791-1366817,1367536-1367616,1367858-1367900,
1368104-1368182,1368291-1368450,1368565-1368692,
1369134-1369202,1369796-1369883,1370516-1370591,
1370767-1370840,1372635-1372742,1373783-1373944,
1374179-1374283,1374447-1374527,1374603-1375803,
1376654-1376750,1378086-1378160,1378461-1378623
Length = 938
Score = 26.2 bits (55), Expect = 8.1
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = +2
Query: 125 IWEL-----DTEPELIQYRLSKWK*SRLLRVAVHRSNSSTTAPSDSHCPNV 262
IWE+ D +P ++ R+ R L +H SNS T++ D P+V
Sbjct: 507 IWEVSSKADDKKPSVVGNRMQNNSGFRALNNIMHMSNSPTSSYRDGEDPSV 557
>02_04_0364 +
22374735-22374749,22374903-22375076,22377858-22377935,
22379270-22380407,22380507-22380901,22382230-22382416,
22382872-22382942,22383705-22383755
Length = 702
Score = 26.2 bits (55), Expect = 8.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 203 AVHRSNSSTTAPSDSHCPNVCTTTRDLI 286
AV +SS PS++H P+ T+DL+
Sbjct: 557 AVPEKSSSVVCPSENHEPHAKPETQDLV 584
>01_06_0282 -
28160321-28160417,28160585-28160653,28161090-28161145,
28161650-28161741,28162314-28162398,28162512-28162628,
28162766-28162798,28163109-28163199,28163908-28163967,
28164115-28164180,28165238-28165430,28165665-28165821
Length = 371
Score = 26.2 bits (55), Expect = 8.1
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 249 WESDGAVVELFDLWTA 202
W SDG VE +D WTA
Sbjct: 83 WPSDGGGVEEYDPWTA 98
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,518,359
Number of Sequences: 37544
Number of extensions: 210357
Number of successful extensions: 647
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 576724416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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