Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt29j23
(369 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X75339-1|CAA53089.1| 177|Drosophila melanogaster ribosomal prot... 176 6e-45
AY071222-1|AAL48844.1| 177|Drosophila melanogaster RE26382p pro... 176 6e-45
AE013599-2503|AAF57838.1| 177|Drosophila melanogaster CG6510-PA... 176 6e-45
AY129442-1|AAM76184.1| 1124|Drosophila melanogaster LD16566p pro... 29 1.9
AE014296-2184|AAF49884.1| 1087|Drosophila melanogaster CG10971-P... 29 1.9
AE014296-2183|AAF49885.2| 1124|Drosophila melanogaster CG10971-P... 29 1.9
AY070898-1|AAL48520.1| 220|Drosophila melanogaster RE01312p pro... 27 5.8
AF109078-1|AAD26132.1| 1377|Drosophila melanogaster mutant epide... 27 5.8
AE013599-282|AAF59310.2| 220|Drosophila melanogaster CG12845-PA... 27 5.8
AY071688-1|AAL49310.1| 947|Drosophila melanogaster RH10407p pro... 27 7.7
AE013599-3221|AAM70919.1| 1377|Drosophila melanogaster CG10079-P... 27 7.7
AE013599-2836|AAM70845.1| 947|Drosophila melanogaster CG7097-PB... 27 7.7
AE013599-2835|AAF57595.1| 1218|Drosophila melanogaster CG7097-PA... 27 7.7
>X75339-1|CAA53089.1| 177|Drosophila melanogaster ribosomal protein
L18a protein.
Length = 177
Score = 176 bits (429), Expect = 6e-45
Identities = 79/106 (74%), Positives = 90/106 (84%)
Frame = +1
Query: 1 SPIKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVE 180
SP+KIKNFGIWLRY+SRSG HNMYREYRDL+VGGAVTQCYRDMGARHRARAHSIQIIKV+
Sbjct: 71 SPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVD 130
Query: 181 VIKAAACRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 318
I AA RR VKQFH+S I+FPL +RVHH F++++P TYF
Sbjct: 131 SIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKLFSFRKPRTYF 176
>AY071222-1|AAL48844.1| 177|Drosophila melanogaster RE26382p
protein.
Length = 177
Score = 176 bits (429), Expect = 6e-45
Identities = 79/106 (74%), Positives = 90/106 (84%)
Frame = +1
Query: 1 SPIKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVE 180
SP+KIKNFGIWLRY+SRSG HNMYREYRDL+VGGAVTQCYRDMGARHRARAHSIQIIKV+
Sbjct: 71 SPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVD 130
Query: 181 VIKAAACRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 318
I AA RR VKQFH+S I+FPL +RVHH F++++P TYF
Sbjct: 131 SIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKLFSFRKPRTYF 176
>AE013599-2503|AAF57838.1| 177|Drosophila melanogaster CG6510-PA
protein.
Length = 177
Score = 176 bits (429), Expect = 6e-45
Identities = 79/106 (74%), Positives = 90/106 (84%)
Frame = +1
Query: 1 SPIKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVE 180
SP+KIKNFGIWLRY+SRSG HNMYREYRDL+VGGAVTQCYRDMGARHRARAHSIQIIKV+
Sbjct: 71 SPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVD 130
Query: 181 VIKAAACRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 318
I AA RR VKQFH+S I+FPL +RVHH F++++P TYF
Sbjct: 131 SIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKLFSFRKPRTYF 176
>AY129442-1|AAM76184.1| 1124|Drosophila melanogaster LD16566p
protein.
Length = 1124
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +2
Query: 116 ATEIWELDTEPELIQYRLSKWK*SRLLRVAVHRSNSSTTAPSDSH 250
A W + + L+Q R + WK S LL + + S S SH
Sbjct: 45 AKTFWMIISRQPLMQSRFTAWKFSHLLHKVLREGHESAIRHSQSH 89
>AE014296-2184|AAF49884.1| 1087|Drosophila melanogaster CG10971-PB,
isoform B protein.
Length = 1087
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +2
Query: 116 ATEIWELDTEPELIQYRLSKWK*SRLLRVAVHRSNSSTTAPSDSH 250
A W + + L+Q R + WK S LL + + S S SH
Sbjct: 8 AKTFWMIISRQPLMQSRFTAWKFSHLLHKVLREGHESAIRHSQSH 52
>AE014296-2183|AAF49885.2| 1124|Drosophila melanogaster CG10971-PA,
isoform A protein.
Length = 1124
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +2
Query: 116 ATEIWELDTEPELIQYRLSKWK*SRLLRVAVHRSNSSTTAPSDSH 250
A W + + L+Q R + WK S LL + + S S SH
Sbjct: 45 AKTFWMIISRQPLMQSRFTAWKFSHLLHKVLREGHESAIRHSQSH 89
>AY070898-1|AAL48520.1| 220|Drosophila melanogaster RE01312p
protein.
Length = 220
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -2
Query: 257 LGNGNLMVLLWNCLTCGRRHAAALITSTLIICI 159
LG L+V+LW L+ R + +T + +C+
Sbjct: 52 LGAAALLVVLWGYLSAWRENVCCTVTFIIFLCL 84
>AF109078-1|AAD26132.1| 1377|Drosophila melanogaster mutant
epidermal growth factorreceptor isoform II protein.
Length = 1377
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +3
Query: 99 WSCHSVLQRYGS*TQSPSSFNTDYQSGSNQGCCVSPSTGQTVP--QQHH 239
WS +L S T S S+ N Y N C+ + +VP ++HH
Sbjct: 21 WSVLLILACMESITTSSSASNAGYVDNGNMKVCIGTKSRLSVPSNKEHH 69
>AE013599-282|AAF59310.2| 220|Drosophila melanogaster CG12845-PA
protein.
Length = 220
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -2
Query: 257 LGNGNLMVLLWNCLTCGRRHAAALITSTLIICI 159
LG L+V+LW L+ R + +T + +C+
Sbjct: 52 LGAAALLVVLWGYLSAWRENVCCTVTFIIFLCL 84
>AY071688-1|AAL49310.1| 947|Drosophila melanogaster RH10407p
protein.
Length = 947
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 160 IQIIKVEVIKAAACRRPQVKQFHNSTIR 243
IQII+ E+I CR P + ++ S +R
Sbjct: 65 IQIIQQEIIMMRDCRHPNIIAYYGSYLR 92
>AE013599-3221|AAM70919.1| 1377|Drosophila melanogaster CG10079-PA,
isoform A protein.
Length = 1377
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +3
Query: 99 WSCHSVLQRYGS*TQSPSSFNTDYQSGSNQGCCVSPSTGQTVP--QQHH 239
WS +L S T S S N Y N C+ + +VP ++HH
Sbjct: 21 WSVLLILACMASITTSSSVSNAGYVDNGNMKVCIGTKSRLSVPSNKEHH 69
>AE013599-2836|AAM70845.1| 947|Drosophila melanogaster CG7097-PB,
isoform B protein.
Length = 947
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 160 IQIIKVEVIKAAACRRPQVKQFHNSTIR 243
IQII+ E+I CR P + ++ S +R
Sbjct: 65 IQIIQQEIIMMRDCRHPNIIAYYGSYLR 92
>AE013599-2835|AAF57595.1| 1218|Drosophila melanogaster CG7097-PA,
isoform A protein.
Length = 1218
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 160 IQIIKVEVIKAAACRRPQVKQFHNSTIR 243
IQII+ E+I CR P + ++ S +R
Sbjct: 65 IQIIQQEIIMMRDCRHPNIIAYYGSYLR 92
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,605,291
Number of Sequences: 53049
Number of extensions: 364923
Number of successful extensions: 1181
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1181
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 964005624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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