Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt29j22
(762 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1851.02 |||1-acylglycerol-3-phosphate O-acyltransferase|Schi... 70 3e-13
SPBC18H10.16 |||amino acid permease, unknown 9|Schizosaccharomyc... 29 0.72
SPAC630.05 |gyp7||GTPase activating protein Gyp7 |Schizosaccharo... 28 1.7
SPAC27D7.03c |mei2||RNA-binding protein involved in meiosis Mei2... 28 1.7
SPCC320.06 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 28 1.7
SPBC215.09c |erg10||acetyl-CoA C-acetyltransferase Erg10 |Schizo... 27 2.2
SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|c... 27 2.9
SPBC1718.04 |||glycerol-3-phosphate O-acyltransferase |Schizosac... 26 6.7
SPBC19G7.13 |trf1||telomeric DNA binding factor Trf1|Schizosacch... 26 6.7
>SPAC1851.02 |||1-acylglycerol-3-phosphate
O-acyltransferase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 279
Score = 70.1 bits (164), Expect = 3e-13
Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 3/137 (2%)
Frame = +2
Query: 356 LIPAALLRLSARMLGIRWEVRGLENVDNSRGAVILLNHQSALDLYVLAVIWPLMARCTVV 535
L A L++ +L R+++ E + + AV+++NHQS LD +LA+ +V+
Sbjct: 70 LTAKAYYGLASTILDFRFKIENEEILRKHKSAVLVVNHQSELD--ILAIGRTFGPNYSVI 127
Query: 536 AKRSLQYLVPFGTATWLWGTVFIDRGAQS-ARNALNKQAEAIKVHKRKLLLFPEGTRHSG 712
AK+SL+Y+ G L VFIDR +S A K A ++ + +F EGTR
Sbjct: 128 AKKSLRYVPILGWFMILSDVVFIDRSRRSDAIQLFAKAARRMRKENISIWVFAEGTRSYS 187
Query: 713 DK--LLPFRKGAFHVAM 757
K LLP +KGAFH+A+
Sbjct: 188 LKPCLLPLKKGAFHLAV 204
>SPBC18H10.16 |||amino acid permease, unknown 9|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1050
Score = 29.1 bits (62), Expect = 0.72
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 206 CIMVLLLILFGISSAARYYIKFTLFIVLCLTFATAPVPLMLLKPFDPRNALIPAALLRLS 385
C++ + IL + SA LF+V+ L+ + P+ + + PF + L+ L+ S
Sbjct: 211 CVLAMCCILCCLGSAIFAKASNALFVVIILSTISIPISSIFVHPFKDPSLLVHFTGLKWS 270
Query: 386 ARM 394
M
Sbjct: 271 TLM 273
>SPAC630.05 |gyp7||GTPase activating protein Gyp7
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 27.9 bits (59), Expect = 1.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 150 LIIFFRGIRKWRLLMLCWDVLWSYY 224
L+I+F+ W +L+ WDVL++ Y
Sbjct: 609 LLIYFKREFDWEVLLKLWDVLFTNY 633
>SPAC27D7.03c |mei2||RNA-binding protein involved in meiosis
Mei2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 750
Score = 27.9 bits (59), Expect = 1.7
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = +1
Query: 376 TTVSANVGYPLGSSGSRECGQLTWSCHIAQSSERIGFVCAGCDLATYGALYCRRKAFSSI 555
T+ ++++ P G SG W+ + SS + A C ++ G+ Y F S+
Sbjct: 373 TSSASSLSVPRGFSGMLN-NNSEWNNSMTMSSNQETPTAASCAVSRIGSSYGMSNNFGSV 431
Query: 556 P-GALRNS--YLAVGYGIHRQRSPVCP 627
P G +S + GY SPV P
Sbjct: 432 PLGRTESSPAWGTSGYYDVSSTSPVAP 458
>SPCC320.06 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 289
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 579 LGCGVRYSSTEEPSLPVTL*TNKLKQSKFTSVS 677
L C YSS + +P+TL T ++ F S+S
Sbjct: 8 LHCADAYSSADSKHVPLTLSTRRINLQSFQSIS 40
>SPBC215.09c |erg10||acetyl-CoA C-acetyltransferase Erg10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 27.5 bits (58), Expect = 2.2
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +1
Query: 394 VGYPLGSSGSRECGQLTWSCHIAQSSERIGFVCAGCD 504
+G+PLGSSGSR L + +AQ +IG V A C+
Sbjct: 349 MGHPLGSSGSRIICTLAYI--LAQKDAKIG-VAAVCN 382
>SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 796
Score = 27.1 bits (57), Expect = 2.9
Identities = 10/39 (25%), Positives = 23/39 (58%)
Frame = +2
Query: 194 VVLGCIMVLLLILFGISSAARYYIKFTLFIVLCLTFATA 310
++ GC+++ L ++ +S Y++ +F +LC T +A
Sbjct: 696 MIFGCVIMQLTMMGLMSLRKAYWLSTVIFPLLCFTVISA 734
>SPBC1718.04 |||glycerol-3-phosphate O-acyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 677 LLLFPEGTRHSGDKLLPFRKGAFHVAM 757
+ LFPEG H ++LP + G +A+
Sbjct: 203 IALFPEGGSHDRPEMLPLKAGVAIMAL 229
>SPBC19G7.13 |trf1||telomeric DNA binding factor
Trf1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 25.8 bits (54), Expect = 6.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 357 SAFLGSNGFSNISGTGAVANVKHSTMNNVN 268
S F GS+ N+S V+H T NN+N
Sbjct: 366 STFDGSSETQNVSSVVLYDQVRHMTNNNLN 395
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,121,145
Number of Sequences: 5004
Number of extensions: 64888
Number of successful extensions: 177
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 175
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 365309308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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