Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt29h13
(776 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0082 + 12059692-12060209,12060484-12060973 57 2e-08
04_03_0563 - 17195605-17196681 56 2e-08
11_04_0409 + 17345182-17345669,17346262-17346760 56 3e-08
09_06_0229 + 21709510-21709532,21710021-21710041,21712386-21713577 56 4e-08
09_02_0094 + 4196729-4197571 55 5e-08
11_04_0176 - 14536305-14537315 54 1e-07
08_02_1246 - 25559601-25560026,25560031-25560576 54 1e-07
11_01_0249 - 1913739-1914755 52 5e-07
02_05_0329 - 27986261-27987372,27988632-27988638,27988999-279891... 52 5e-07
08_02_1245 - 25557201-25558199 52 7e-07
10_02_0152 - 5902554-5903058,5904171-5904670 50 2e-06
04_04_0569 + 26293891-26294931 48 8e-06
11_01_0247 - 1892248-1892602,1892835-1893112,1893371-1893392,189... 47 1e-05
12_01_0245 - 1829982-1830995 46 3e-05
07_03_1201 + 24791588-24792619 46 3e-05
06_03_0815 - 24905641-24905874,24905974-24906044,24906678-249068... 46 3e-05
12_01_0244 - 1821413-1822144 46 4e-05
01_03_0018 - 11686420-11687460 45 6e-05
12_01_0247 - 1836971-1837810 45 8e-05
12_01_0976 - 9821481-9821973,9822417-9822940 44 2e-04
12_01_0248 - 1841454-1841820,1842223-1842728 43 2e-04
11_04_0414 + 17386806-17387936 43 2e-04
11_01_0248 - 1910312-1910730,1910805-1911336 42 5e-04
08_02_1243 - 25527523-25527960,25527993-25528604 40 0.002
08_01_0867 + 8458570-8459168,8460128-8460313,8462684-8463167 40 0.002
08_01_1054 - 10719787-10719842,10719865-10720402 37 0.021
01_01_0534 + 3920356-3920867,3921141-3922134 31 1.0
06_03_0983 - 26559772-26559915,26560149-26560251,26560335-265605... 29 3.1
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411... 24 4.3
10_08_0172 - 15406961-15407488,15408068-15408187,15408308-154085... 29 5.4
08_02_1436 + 27083698-27084111,27084333-27084416,27084502-270845... 28 7.2
03_01_0309 - 2432395-2433271,2433494-2434495,2434538-2435073,243... 28 7.2
02_01_0577 + 4280590-4281225,4281749-4282102,4282214-4282412,428... 28 7.2
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113... 28 9.5
01_06_0481 - 29646245-29646371,29646474-29646556,29646672-296467... 28 9.5
>08_02_0082 + 12059692-12060209,12060484-12060973
Length = 335
Score = 56.8 bits (131), Expect = 2e-08
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 1/152 (0%)
Frame = +2
Query: 254 RPDDIWVIPFSRSGTTWLQELVWLVNNNLDYVAAASQPLSKRYAYIEYVTQKSDAAKKMP 433
R DD+ V +SGTTWL+ L + +A + P S ++ ++ + +P
Sbjct: 80 RADDVLVASLQKSGTTWLKALTFAT------MARGAWPPSSH----DHPLRRLNPHLCVP 129
Query: 434 QSIRPEQRATFESFETLPNLPSPRYVKSHLPLSRLPPALLDTAKVFYVARDPRDVAVSL- 610
E T L LPSPR + +H+PLS LPP+ T K+ Y+ RD +D AVSL
Sbjct: 130 SL---EVLYTLGRDALLDMLPSPRLLSTHMPLSLLPPS---TCKIVYIYRDQKDTAVSLW 183
Query: 611 HFAVKLFGYFSDEVTFKEFWDLFKRDLVLHTP 706
HF + ++TF E + F + + P
Sbjct: 184 HFMKRR----HPDLTFSEVHEAFCNGICMGGP 211
>04_03_0563 - 17195605-17196681
Length = 358
Score = 56.4 bits (130), Expect = 2e-08
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Frame = +2
Query: 254 RPDDIWVIPFSRSGTTWLQELVWLVNNNLDYVAAASQPLSKRYAYIEYVTQKSDAAKKMP 433
RP D+ + + +SGTTW++ LV+ + + Y PL + D +
Sbjct: 87 RPSDVLLASYPKSGTTWMKALVFAIMSRKVY-PLRDHPLLR--------LNPHDCVVHLS 137
Query: 434 QSIRPEQRATFESFETLPNLPSPRYVKSHLPLSRLPPA-LLDTA---KVFYVARDPRDVA 601
+ + A E+ LPSPR + H+P S LP + ++D++ K+ YV RDP+DV
Sbjct: 138 GAYATGKEAVVEA------LPSPRIMAVHMPFSTLPASVVVDSSSGCKIVYVWRDPKDVL 191
Query: 602 VSL-HFAVKLFGYFSDEVTFKEFWDLFK 682
VSL H+ KL +E EF DL++
Sbjct: 192 VSLWHYYRKL---RPEEAHVSEFHDLYE 216
>11_04_0409 + 17345182-17345669,17346262-17346760
Length = 328
Score = 56.0 bits (129), Expect = 3e-08
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Frame = +2
Query: 248 EIRPDDIWVIPFSRSGTTWLQELVWLVNNNLDYVAAAS-QPLSKRYAYIEYVTQKSDAAK 424
E RP D+ + F +SGTTWL+ L + N Y + PL +R + D +
Sbjct: 63 EPRPSDVLLASFPKSGTTWLKALAFATLNRAAYPPSGEGHPLRRRGPH--------DCVQ 114
Query: 425 KMPQSIRPEQRATFESFETLPNLPSPRYVKSHLPLSRLPPAL-LDTA--KVFYVARDPRD 595
+ + A S + +LPSPR + +HLP S LP + D++ ++ Y+ RDP+D
Sbjct: 115 FL-------ESALVVSDDMFASLPSPRLLSTHLPYSLLPEGVKADSSGCRIVYICRDPKD 167
Query: 596 VAVS 607
V VS
Sbjct: 168 VLVS 171
>09_06_0229 + 21709510-21709532,21710021-21710041,21712386-21713577
Length = 411
Score = 55.6 bits (128), Expect = 4e-08
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Frame = +2
Query: 257 PDDIWVIPFSRSGTTWLQELVWLVNNNLDYVAA-ASQPLSKRYAY--IEYVTQKSDAAKK 427
PD + + F +SGT+WL+ L + N + + A PL +R + +E+ + D
Sbjct: 112 PDGVLLASFPKSGTSWLKALAFAAANRAAHPPSDADHPLRRRNPHDCVEFFEMRPDE--- 168
Query: 428 MPQSIRPEQRATFESFETLPNLPSPRYVKSHLPLSRLPPALL--DTAKVFYVARDPRDVA 601
+ + + P PR + +HLP S LP + D ++ Y+ RDP+D
Sbjct: 169 -----HTGATSDGIAVDAASPPPPPRVLATHLPYSLLPKRITAGDGCRIIYICRDPKDTL 223
Query: 602 VSL-HFAVKLFGYFSDEV---TFKEFWDLF 679
VS HF+ K+ + + TF E ++LF
Sbjct: 224 VSFWHFSKKMAATMAVDAGAFTFDEAFELF 253
>09_02_0094 + 4196729-4197571
Length = 280
Score = 55.2 bits (127), Expect = 5e-08
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Frame = +2
Query: 242 NLEIRPDDIWVIPFSRSGTTWLQELVWLVNNNLDY--VAAASQPLSKRYAYIEYVTQKSD 415
N + R DD+ ++ +S TTWL+ L + + N + + A+ PL +TQ
Sbjct: 11 NFKPRHDDVILVTHPKSSTTWLKALAFAIVNRSSFESIDASHHPL---------LTQN-- 59
Query: 416 AAKKMPQSIRPEQRATFESFETLPNLPSPRYVKSHLPLSRLPPALLDT-AKVFYVARDPR 592
PQ + P A + + L LPSPR + +HLPLS LP + + Y+ R+P+
Sbjct: 60 -----PQHLVPFVGAQGGNLDYLETLPSPRLLTTHLPLSLLPSTVTTMGCHIIYLCREPK 114
Query: 593 DVAVS-LHFAVKL 628
D +S HF K+
Sbjct: 115 DAFISRWHFDNKI 127
>11_04_0176 - 14536305-14537315
Length = 336
Score = 54.4 bits (125), Expect = 1e-07
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
Frame = +2
Query: 254 RPDDIWVIPFSRSGTTWLQELVWLVNNNLDYVAAASQPLSKRYAYIEYVTQKSDAAKKMP 433
RP DI + F + GTTWL+ L + N Y P + + +E+ D +
Sbjct: 50 RPSDILLSSFPKCGTTWLKALAFATLNRSTY-----PPSDEHHPLLEH--NPHDLVGFL- 101
Query: 434 QSIRPEQRATFESFETLPNLPSPRYVKSHLPLSRLPPALLDT---AKVFYVARDPRDVAV 604
I P+ E +LPSPR + +HLP S LP + + ++ Y+ RDP+D V
Sbjct: 102 -EIYPK-------LELYESLPSPRLLSTHLPYSMLPHRIREQETGCRLVYIYRDPKDAMV 153
Query: 605 SLHFAVKLFGYFSDEVTFKEFWDLF 679
S+ K + +TF+E +D+F
Sbjct: 154 SMWHQNK--KEKKNRLTFEEMFDMF 176
>08_02_1246 - 25559601-25560026,25560031-25560576
Length = 323
Score = 54.4 bits (125), Expect = 1e-07
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
Frame = +2
Query: 254 RPDDIWVIPFSRSGTTWLQELVWLVNNNLDYVAAASQPLSKRYAYIEYVTQKSDAAKKMP 433
RPDD+ + + + GTTWL+ L + D + P++ + T D +
Sbjct: 68 RPDDVLLATYPKCGTTWLKAL------SFDIANRSRHPVAGAGDHPLLTTHPQDLVPFIE 121
Query: 434 QSIRPEQRATFESFETLPNLPSPRYVKSHLPLSRLPPALLDT-AKVFYVARDPRDVAVSL 610
R L LPSPR + +HLP LPP + + ++ Y+ R+P+DV VS
Sbjct: 122 TPFR-----HLHPLSALDALPSPRLLSTHLPHQLLPPRVAELGCRIVYLCREPKDVVVST 176
Query: 611 -HFAVK 625
HF K
Sbjct: 177 WHFMNK 182
>11_01_0249 - 1913739-1914755
Length = 338
Score = 52.0 bits (119), Expect = 5e-07
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 3/128 (2%)
Frame = +2
Query: 242 NLEIRPDDIWVIPFSRSGTTWLQELVW-LVNNNLDYVAAASQPLSKRYAYIEYVTQKSDA 418
+L R DI+++ F +SGTTWL+ L+ ++ D +AA S + + ++ +
Sbjct: 69 HLTARTTDIFMVTFPKSGTTWLKALLHSALHRRADDLAAHSP-----HQLVPFLETQVFI 123
Query: 419 AKKMPQSIRPEQRATFESFETLPNLPSPRYVKSHLPLSRLPPALLDTA-KVFYVARDPRD 595
++P L +LP+PR + +H+P LP ++ D++ KV Y+ RDP+D
Sbjct: 124 KDRIPD---------------LSSLPAPRLLMTHIPSQSLPDSVADSSCKVVYLCRDPKD 168
Query: 596 VAVSL-HF 616
+SL HF
Sbjct: 169 CFISLWHF 176
>02_05_0329 -
27986261-27987372,27988632-27988638,27988999-27989128,
27989157-27989216,27989318-27989970,27990056-27990526
Length = 810
Score = 52.0 bits (119), Expect = 5e-07
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Frame = +2
Query: 254 RPDDIWVIPFSRSGTTWLQELVWLVNNNLDYVAAASQ-PL--SKRYAYIEYVTQKSDAAK 424
RP D+ + +SG+TWL+ L + V + + AA Q PL S + + ++ + ++
Sbjct: 532 RPSDVILATMPKSGSTWLKALAFCVVHRGRHAPAAGQHPLLHSSPHDLVPFLHSIYEISR 591
Query: 425 KMPQSIRPEQRATFESFETLPNLPSPRYVKSHLPLSRLPPAL-LDTAKVFYVARDPRDVA 601
+ P R L +PSPR + H PLS LP ++ +V Y+ RDP+D
Sbjct: 592 SC--RVAPGHR--------LDAMPSPRILAVHEPLSSLPASVKASGCRVVYLCRDPKDAF 641
Query: 602 VSL-HFAVKLFGYFSDEVTFKEFWDL 676
VSL H+ ++ S F E ++L
Sbjct: 642 VSLRHYLDEIKPEGSTMTPFDEAFEL 667
>08_02_1245 - 25557201-25558199
Length = 332
Score = 51.6 bits (118), Expect = 7e-07
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Frame = +2
Query: 254 RPDDIWVIPFSRSGTTWLQELVWLVNNNLDY--VAAASQPLSKRYAYIEYVTQKSDAAKK 427
R DD+ + + + GTTWL+ L + + N + V+A PL +TQ +
Sbjct: 65 RDDDVLLATYPKCGTTWLKALSFAIANRHRHPVVSAGHHPL---------LTQ---SPHD 112
Query: 428 MPQSIRPEQRATFESFETLPNLPSPRYVKSHLPLSRLPPALLDTAKVFYVARDPRDVAVS 607
+ I R L +PSPR + +H+P LPP + ++ Y+ R+P+DV +S
Sbjct: 113 LVPFIELPFRHIHPLAAALDAIPSPRLLGTHMPHHLLPPRI--GCRIVYLCREPKDVVIS 170
Query: 608 L-HFAVKLFGYFSDEVTFKEFWDLF 679
HF K+ FS + F + ++LF
Sbjct: 171 TWHFMNKVIEGFS--IDFDKAFELF 193
>10_02_0152 - 5902554-5903058,5904171-5904670
Length = 334
Score = 50.4 bits (115), Expect = 2e-06
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Frame = +2
Query: 248 EIRPDDIWVIPFSRSGTTWLQELVWLVNNNLDY----VAAASQPLSKRYAYIEYVTQKSD 415
E R D+ V + GTTWL+ L + Y VA + ++R+ + +
Sbjct: 57 EARDGDVVVASLPKCGTTWLKALAFATAVRGTYPPPPVAGSDDEGNRRHPLLRLNPHE-- 114
Query: 416 AAKKMPQSIRPEQRATFESFETLPNLPSPRYVKSHLPLSRLPPALLDTA--KVFYVARDP 589
+S+ +T E L PSPR + +HLP S LP ++ D++ K+ YV R P
Sbjct: 115 -CVPFLESVY----STMEEESKLDATPSPRLLSTHLPYSVLPASITDSSRCKIIYVCRQP 169
Query: 590 RDVAVSL-HF 616
+D+ +S HF
Sbjct: 170 KDMLISFWHF 179
>04_04_0569 + 26293891-26294931
Length = 346
Score = 48.0 bits (109), Expect = 8e-06
Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 3/122 (2%)
Frame = +2
Query: 254 RPDDIWVIPFSRSGTTWLQELVWLVNNNLDYVA--AASQPLSKRYAYIEYVTQKSDAAKK 427
RP DI V +SGTTW++ L++ + ++ A AA P + + E V
Sbjct: 73 RPSDIIVATLPKSGTTWIKALLYATVHRREHPADAAADHPFNSLGPH-ECV--------- 122
Query: 428 MPQSIRPEQRATFESFETLPNLPSPRYVKSHLPLSRLPPALLDT-AKVFYVARDPRDVAV 604
+ Q T L LP PR +H+P + LP A + KV YV RDP+D +
Sbjct: 123 ---NFLEYQLYTNNRVPDLGRLPDPRLFATHVPFTSLPSAAAASGCKVVYVCRDPKDNLI 179
Query: 605 SL 610
S+
Sbjct: 180 SM 181
>11_01_0247 -
1892248-1892602,1892835-1893112,1893371-1893392,
1894613-1895268
Length = 436
Score = 47.2 bits (107), Expect = 1e-05
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
Frame = +2
Query: 242 NLEIRPDDIWVIPFSRSGTTWLQELVW-LVNNNLDYVAAASQPLSKRYAYIEYVTQKSDA 418
+L R DI++ F +S TTWL+ L++ ++ D + A S + + ++ + A
Sbjct: 69 HLTARATDIFLTTFPKSSTTWLKALLYSTLHRGTDELVAHSP-----HQLVPFLESQVFA 123
Query: 419 AKKMPQSIRPEQRATFESFETLPNLPSPRYVKSHLPLSRLPPALLDT-AKVFYVARDPRD 595
++P L +LPSPR +H+P LP ++ + V Y+ RDP+D
Sbjct: 124 NDRIPD---------------LSSLPSPRLFMTHIPSQSLPDSVAASGCNVVYLCRDPKD 168
Query: 596 VAVSL-HFAVKLFGYFSDEVTFKEFWD 673
VSL HF + + DE ++F D
Sbjct: 169 CFVSLWHFWNRFMPWDIDE-AHRQFCD 194
Score = 35.1 bits (77), Expect = 0.063
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +2
Query: 158 GYSRPFVRVGAPGYLATPGYQDHAEDIYNLEIRPDDIWVIPFSRSGTTWLQELVWLVNNN 337
G +P+ R Y++ G +L R D+++ F +SGTTWL+ L++ V+ N
Sbjct: 266 GIGQPYCRHPDGWYMSRRGVVSAMAIKRHLMARTTDVFIATFPKSGTTWLKALIF-VSWN 324
Query: 338 LD 343
+D
Sbjct: 325 ID 326
>12_01_0245 - 1829982-1830995
Length = 337
Score = 46.4 bits (105), Expect = 3e-05
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
Frame = +2
Query: 242 NLEIRPDDIWVIPFSRSGTTWLQELVW-LVNNNLDYVAAASQPLSKRYAYIEYVTQKSDA 418
+L R DI++ F +SGTTWL+ L++ ++ D + A S + + ++ +
Sbjct: 68 HLTARATDIFLTTFPKSGTTWLKVLLYSTLHRGTDELVAHSP-----HQLVPFLESQVFV 122
Query: 419 AKKMPQSIRPEQRATFESFETLPNLPSPRYVKSHLPLSRLPPALLDTA-KVFYVARDPRD 595
++P L +L SPR +H+P LP ++ + KV Y+ RDP+D
Sbjct: 123 NDRIPD---------------LSSLSSPRLFMTHIPSQSLPNSVATSGCKVVYLCRDPKD 167
Query: 596 VAVSL-HFAVKLFGYFSDEVTFKEFWD 673
VSL HF + + DE ++F D
Sbjct: 168 CFVSLWHFWNRFMPWDIDE-AHRQFCD 193
>07_03_1201 + 24791588-24792619
Length = 343
Score = 46.0 bits (104), Expect = 3e-05
Identities = 40/133 (30%), Positives = 58/133 (43%), Gaps = 8/133 (6%)
Frame = +2
Query: 254 RPDDIWVIPFSRSGTTWLQELVWLVNNNLDYVAAASQPLSKRYAYIEYVTQKSDAAKKMP 433
R DD+ + + + GTTWL+ L + Y A PL + P
Sbjct: 76 RADDVVLASYPKCGTTWLKALAFAAMTRAAY-PADEHPL----------------LRLNP 118
Query: 434 QSIRPEQRATF-ESFET-LPNLPSPRYVKSHLPLSRLPPALL-----DTAKVFYVARDPR 592
+ P F + E L LPSPR + +H P LP +++ KV Y+ RDP+
Sbjct: 119 HDVIPFVEDVFTDGHEAKLDMLPSPRLINTHTPYQLLPESVVAGDGGGGCKVVYICRDPK 178
Query: 593 DVAVSL-HFAVKL 628
D+ VSL HF +L
Sbjct: 179 DMVVSLYHFMRRL 191
>06_03_0815 -
24905641-24905874,24905974-24906044,24906678-24906847,
24906862-24906955,24907904-24907948,24908599-24909631
Length = 548
Score = 46.0 bits (104), Expect = 3e-05
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 12/131 (9%)
Frame = +2
Query: 254 RPDDIWVIPFSRSGTTWLQELVWLVNNNLDYV--AAASQPLS-----KRYAYIEYVTQKS 412
RP DI V +SGTTW++ L++ + ++ AA P + + ++EY ++
Sbjct: 77 RPSDIVVPTLPKSGTTWIKALLYATVHRREHPADAAGDHPFNSLGPHECVKFLEYHLYRA 136
Query: 413 DAAKKMPQSIRPEQRATFESFETLPNLPSPRYVKSHLPLSRLPPALLDTA-----KVFYV 577
D A P+ L LP PR +H P LP A++ A KV YV
Sbjct: 137 DEA--------PD----------LDALPDPRLFATHAPFDLLPRAVVAAAPPSGCKVVYV 178
Query: 578 ARDPRDVAVSL 610
RDP+D VSL
Sbjct: 179 CRDPKDTLVSL 189
>12_01_0244 - 1821413-1822144
Length = 243
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +2
Query: 482 LPNLPSPRYVKSHLPLSRLPPALLDT-AKVFYVARDPRDVAVSLHFAVKLFGYFSDEVTF 658
L +LP PR + +H+P LP ++ + +KV Y+ RDP+D VSL F ++ +V
Sbjct: 35 LSSLPEPRLLTTHIPAQSLPDSIAASGSKVVYLCRDPKDCFVSLWHFWNRFMSWNIDVAV 94
Query: 659 KEFWD 673
++F D
Sbjct: 95 RQFCD 99
>01_03_0018 - 11686420-11687460
Length = 346
Score = 45.2 bits (102), Expect = 6e-05
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Frame = +2
Query: 254 RPDDIWVIPFSRSGTTWLQELVWLVNNNLDYVAAASQPLSKRYAYIEYVTQKSDAAKKMP 433
R DI + F + GTTWL+ L++ + D A A + +
Sbjct: 70 RDTDIIIATFPKCGTTWLKALLFATVHR-DGGGAGGVEDDAALAQLR-ARNPHQLVPFLE 127
Query: 434 QSIRPEQRATFESFETLPNLPSPRYVKSHLPLSRLPPAL-LDTAKVFYVARDPRDVAVSL 610
+ RA L +LP+PR + +H+P LP ++ + KV Y+ RDP+D VSL
Sbjct: 128 IQVYVRDRAP-----DLSSLPAPRLLATHIPRPSLPASVAISGCKVVYMCRDPKDCLVSL 182
Query: 611 -HF 616
HF
Sbjct: 183 WHF 185
>12_01_0247 - 1836971-1837810
Length = 279
Score = 44.8 bits (101), Expect = 8e-05
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Frame = +2
Query: 242 NLEIRPDDIWVIPFSRSGTTWLQELVW-LVNNNLDYVAAASQPLSKRYAYIEYVTQKSDA 418
+L R DI+++ F +SGTTW++ L + ++ D + A S + I ++ +
Sbjct: 6 HLTARATDIFLVTFPKSGTTWIKALPYSALHRRADELLAHSP-----HQLISFLESQVFV 60
Query: 419 AKKMPQSIRPEQRATFESFETLPNLPSPRYVKSHLPLSRLPPALLDTA-KVFYVARDPRD 595
++P L +LP P + +H+P LP ++ + KV Y+ RDP+D
Sbjct: 61 KDRIPD---------------LSSLPEPWLLMTHIPSQSLPDSVAASGCKVVYLCRDPKD 105
Query: 596 VAVSL-HF 616
VSL HF
Sbjct: 106 CFVSLWHF 113
>12_01_0976 - 9821481-9821973,9822417-9822940
Length = 338
Score = 43.6 bits (98), Expect = 2e-04
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 2/142 (1%)
Frame = +2
Query: 254 RPDDIWVIPFSRSGTTWLQELVWLVNNNLDYVAAASQPLSKRYAYIEYVTQKSDAAKKMP 433
R D+ + + GTTWL+ L + V A P S R+ + D M
Sbjct: 77 RHGDVVLASPGKCGTTWLKALAFAV-----LARGAYSPASDRHPLLR--LNPHDCVPFME 129
Query: 434 QSIRPEQRATFESFETLPNLPSPRYVKSHLPLSRLPPALLDT--AKVFYVARDPRDVAVS 607
+I + LPSPR + +H+ + LP ++ D KV Y+ R+P+D+ VS
Sbjct: 130 GAISEGWGGKID------ELPSPRLMSTHMQHAALPKSIADEPGCKVVYICREPKDILVS 183
Query: 608 LHFAVKLFGYFSDEVTFKEFWD 673
A F +++F+E ++
Sbjct: 184 ---AWHFFRIIEPDLSFQEVFE 202
>12_01_0248 - 1841454-1841820,1842223-1842728
Length = 290
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Frame = +2
Query: 242 NLEIRPDDIWVIPFSRSGTTWLQELVWLVNNNLDYVAAASQPLSKRYAYIEYVTQKSDAA 421
+L R DI+++ F +SGTTWL+ L+ + AA P + + ++ +
Sbjct: 69 HLTARTTDIFMVTFPKSGTTWLKTLLHSALHRGANDLAAHSP----HQLVPFLETQVFIK 124
Query: 422 KKMPQSIRPEQRATFESFETLPNLPSPRYVKSHLPLSRLPPALLDT-AKVFYVARDP 589
++P L +LP+PR + +H+P LP ++ D+ KV Y+ RDP
Sbjct: 125 DRIPD---------------LSSLPAPRLLMTHIPSQSLPDSVADSGCKVVYLCRDP 166
>11_04_0414 + 17386806-17387936
Length = 376
Score = 43.2 bits (97), Expect = 2e-04
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 18/139 (12%)
Frame = +2
Query: 248 EIRPDDIWVIPFSRSGTTWLQELVWLVNNNLDYVAAA-SQPLSKR--YAYIEY------V 400
E RP D+++ F +SGTTWL+ L + N Y + + PL R + +++ +
Sbjct: 60 EPRPSDVFLASFPKSGTTWLKALAFATINRTTYPPSGDAHPLRHRGPHDCVKFFESTFAI 119
Query: 401 TQKSDAAKKMPQSIRPEQRATFESFE-TLPNLPSPRYVKSHLPLSRLPPALLDTA----- 562
+ + + P RA + P+ R + +H+P S LP + A
Sbjct: 120 SGEGGGGDVDVFAALPSPRAVARPGTCSPPSRRRARLLATHIPYSLLPERITSAAADDGD 179
Query: 563 ---KVFYVARDPRDVAVSL 610
++ YV RDP+D VS+
Sbjct: 180 SGCRIVYVCRDPKDAFVSM 198
>11_01_0248 - 1910312-1910730,1910805-1911336
Length = 316
Score = 41.9 bits (94), Expect = 5e-04
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 2/133 (1%)
Frame = +2
Query: 197 YLATPGYQDHAEDIYNLEIRPDDIWVIPFSRSGTTWLQELVW-LVNNNLDYVAAASQPLS 373
Y+ T G +L R DI+++ F +SGTTW++ L++ ++ D + A S
Sbjct: 53 YMTTAGVVSAMVIKSHLTARATDIFLVTFPKSGTTWIKALLYSALHRRADELVAHSP--- 109
Query: 374 KRYAYIEYVTQKSDAAKKMPQSIRPEQRATFESFETLPNLPSPRYVKSHLPLSRLPPALL 553
+ + ++ + ++P L +LP PR + +H+P LP ++
Sbjct: 110 --HQLVPFLESQVFVKDRIPD---------------LSSLPEPRLLMTHIPSQSLPDSVA 152
Query: 554 DT-AKVFYVARDP 589
+ KV Y+ RDP
Sbjct: 153 ASGCKVVYLCRDP 165
>08_02_1243 - 25527523-25527960,25527993-25528604
Length = 349
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Frame = +2
Query: 482 LPNLPSPRYVKSHLPLSRLPPALLDT-AKVFYVARDPRDVAVSL-HFAVK 625
L LPSPR + +H+P LP + + ++ Y+ R+P+DV VSL H+ K
Sbjct: 155 LDALPSPRLLSTHMPPQLLPRRVAELGCRIVYLCREPKDVVVSLWHYMNK 204
>08_01_0867 + 8458570-8459168,8460128-8460313,8462684-8463167
Length = 422
Score = 39.9 bits (89), Expect = 0.002
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Frame = +2
Query: 263 DIWVIPFSRSGTTWLQELVWLVNNNLDYVAAASQPLSKRYAYIEYVTQKSDAAKKMPQSI 442
D+ + +SGTTWL+ L + V AA P S + D + +
Sbjct: 104 DVLLASLPKSGTTWLKALAFAV-----MARAAHPPASPDHPLRR--LNPHDCVPLVDRLF 156
Query: 443 RPEQRATFESFETLPNLPSPRYVKSHLPLSRLPPALLDTA---KVFYVAR--DPRD 595
P + A L LPSPR + +H+PLS LP + D + K+ Y+ R DP D
Sbjct: 157 APGRDA------VLDELPSPRLMCTHMPLSLLPATVADGSSGCKIIYICRRMDPDD 206
>08_01_1054 - 10719787-10719842,10719865-10720402
Length = 197
Score = 36.7 bits (81), Expect = 0.021
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +2
Query: 254 RPDDIWVIPFSRSGTTWLQELVWL-VNNNLDYVAAASQPLSKRYAYIEYVTQKSDAAKKM 430
RP D+ + ++GTTWL+ L + + L A+ PL + ++ T +S
Sbjct: 88 RPGDVVLATLPKAGTTWLKALAFATMARGLFPPASPDHPLRRLNSHDCVPTVESGLFACG 147
Query: 431 PQSIRPEQRATFESFETLPNLPSPRYVKSHLPLSRLPPALLD 556
+ + L LPSPR + +HLPLS LP ++ D
Sbjct: 148 REGV-------------LDKLPSPRLLNTHLPLSLLPSSITD 176
>01_01_0534 + 3920356-3920867,3921141-3922134
Length = 501
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 107 IKPVTEEEDLI-LKKYYKGYSRPFVRVGAPGYLATPGYQDHAEDIYNLEIRPDDIWVIPF 283
++ +T+EE+++ L + P R+ PG L PG ++ E IY+ E+R D + F
Sbjct: 180 LRDLTDEEEVVKLSGFPTPLELPKARL--PGSLCVPGLEEIREKIYDEEMRSDGKVMNSF 237
Query: 284 SRSGTTWLQ 310
T +++
Sbjct: 238 DELETLYME 246
>06_03_0983 -
26559772-26559915,26560149-26560251,26560335-26560548,
26563352-26563550,26564509-26564862,26565430-26566086
Length = 556
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 248 EIRPDDIWVIPFSRSGTTWLQELVWLVNNNL 340
E+ PDD+ +P+S SGTT L + V L + +L
Sbjct: 183 EVHPDDVVALPYS-SGTTGLPKGVMLTHRSL 212
>06_03_0867 +
25534760-25539620,25540662-25540857,25540957-25541104,
25541673-25541751,25542151-25542238,25542330-25542600,
25542676-25542718,25542801-25542904,25543374-25543790
Length = 2068
Score = 23.8 bits (49), Expect(2) = 4.3
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = +2
Query: 419 AKKMPQSIRPEQRATFESFETLPNLPSPRYVKSHLP 526
A++ PQ + P + + + E P + P H+P
Sbjct: 284 ARRAPQKVAPSRVSVWHRIEENPAMYEPSSPPPHMP 319
Score = 23.4 bits (48), Expect(2) = 4.3
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +2
Query: 191 PGYLATPGYQDHAEDIYNLEIRPDDIWVIPFSRSGTT 301
PGY+ G+ H++ + +I+ +P S GT+
Sbjct: 244 PGYMVHEGFSIHSDSKVSRKIQMPTQMALPGSPHGTS 280
>10_08_0172 -
15406961-15407488,15408068-15408187,15408308-15408568,
15408684-15409112
Length = 445
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +3
Query: 192 RDISLRQGTKTMLKIYTT*RLGLMTYGSSLSLDLGQHGF 308
R +SL Q L+I+T L T G S SL LG+ GF
Sbjct: 74 RQLSLPQRASNNLRIFTFQELKSATRGFSRSLVLGEGGF 112
>08_02_1436 +
27083698-27084111,27084333-27084416,27084502-27084551,
27084676-27084724,27085471-27085545,27085724-27085837
Length = 261
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 300 VVPDLEKGMTHMSSGLISRLYISSAWSWYPGVARYPGAP 184
V+ L++G+ M G + RLYI ++ G+ PG P
Sbjct: 200 VIKGLDEGILSMKVGGLRRLYIPGPLAFPKGLTSAPGRP 238
>03_01_0309 -
2432395-2433271,2433494-2434495,2434538-2435073,
2435579-2435716,2436050-2436148,2436278-2436346,
2436968-2437063
Length = 938
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +2
Query: 608 LHFAVKLFGYFSDEVTFKEFWDLFKRDLVLH---TPIFFSREGSMGE 739
+H A+ FGYF+ +F + W D L T + +G M E
Sbjct: 749 IHLAMGSFGYFAARTSFAQLWKFVPVDAALSYTCTGVDIDEDGFMSE 795
>02_01_0577 +
4280590-4281225,4281749-4282102,4282214-4282412,
4284991-4285204,4285299-4285401,4285481-4285639
Length = 554
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 248 EIRPDDIWVIPFSRSGTTWLQELVWLVNNNL 340
++ PDD+ +P+S SGTT L + V L + +L
Sbjct: 176 DVHPDDVVALPYS-SGTTGLPKGVMLTHRSL 205
>02_01_0163 +
1135592-1135623,1135718-1135816,1135904-1135960,
1136053-1136116,1136174-1136392,1138562-1138945
Length = 284
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +2
Query: 380 YAYIEYVTQKSDAAKKMPQSIRPEQRATFESFETLPNLPSPRYVKSHLPLSRLPP 544
Y ++Y+ +S+A + PQ+ + +QR + P P S PL PP
Sbjct: 139 YEILQYIASQSEAQRSRPQAQQHQQRPPPPRTRQVNPAPPPVPSPSAPPLPPQPP 193
>01_06_0481 -
29646245-29646371,29646474-29646556,29646672-29646752,
29646843-29646899,29647007-29647094,29647304-29647374,
29647457-29647585,29647662-29648051,29648332-29648517,
29648612-29648692,29648787-29648879,29648966-29649086,
29649200-29649409,29649560-29649727,29649898-29650065,
29650144-29650311,29650453-29650620,29650738-29650905,
29651023-29651190,29651567-29651734,29652391-29652558,
29652645-29652812,29655720-29655887,29656069-29656236,
29656391-29656558,29656670-29656837,29657525-29657664,
29658033-29658221,29658243-29658315,29658379-29658452,
29658535-29658654,29658718-29658738,29658794-29658999,
29659094-29659271,29660066-29660126,29660232-29660341,
29660427-29660558,29661091-29661258,29661339-29661465,
29661794-29661831,29663321-29663422,29663505-29663562,
29663659-29663760,29663844-29663990,29664098-29664234,
29664313-29664462,29664561-29664720,29665820-29665878,
29666025-29666181,29666288-29666433,29666523-29666666,
29667242-29667376
Length = 2344
Score = 27.9 bits (59), Expect = 9.5
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
Frame = +2
Query: 326 VNNNLDYVAAASQPL--SKRYAYIE--YVTQKSDAAKKMPQSIRPEQRATF-ESFETLPN 490
++ N DYV A Q L + R +++ + + K SI + E ETL +
Sbjct: 563 LDKNKDYVVAEHQELLNASRCSFVSALFPPASEENTKSSKSSIATRFKVQLHELMETLSS 622
Query: 491 LPSPRYVKSHLPLSRLPPALLDTAKVFYVAR 583
P Y++ P S L PA+ + V R
Sbjct: 623 T-EPHYIRCVKPNSVLKPAIFENTNVLQQLR 652
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,886,170
Number of Sequences: 37544
Number of extensions: 455390
Number of successful extensions: 1226
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1207
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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