Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt29h10
         (271 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   1.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   2.7  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   2.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   2.7  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    20   4.7  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          20   6.2  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    19   8.2  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 194 RTIQNGSAIPRSKIVMRGAWIV 129
           +T  N S  P SK+   G W V
Sbjct: 85  KTSSNASVEPDSKVTYSGLWRV 106


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 2.7
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +2

Query: 158 WIAESPIHFGSSGVDPANVNKL 223
           W+A  PI+FG+       +  L
Sbjct: 719 WLAFVPIYFGTGNAHETQITTL 740


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.0 bits (42), Expect = 2.7
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = +1

Query: 91  SQDRKRLLLDQPRTIHAPRITILDRGIADPFWI 189
           SQ  K LL    R      I +  +GI   +W+
Sbjct: 563 SQSTKELLSPSYRVKERGEIEVKGKGIMKTYWL 595


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 2.7
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +2

Query: 158 WIAESPIHFGSSGVDPANVNKL 223
           W+A  PI+FG+       +  L
Sbjct: 809 WLAFVPIYFGTGNAHETQITTL 830


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 20.2 bits (40), Expect = 4.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 112 LLDQPRTIHAPRITILD 162
           +L     IH PRI I+D
Sbjct: 133 ILGNNTVIHQPRIIIID 149


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 19.8 bits (39), Expect = 6.2
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = -2

Query: 258 IRICFISKYLSFNLFTLAGSTPDDPKWIGDSAIQDRDAWSVDR 130
           I  C + K  S N   L      D KW+  + I+ + +WS  R
Sbjct: 9   INSCDLLKKRSENDPFLKRLITGDEKWVVYNNIKRKRSWSRPR 51


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 19.4 bits (38), Expect = 8.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 178 PFWIVRCGSG*CKQ 219
           PF++V   SG C Q
Sbjct: 350 PFFVVNLWSGFCSQ 363


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,222
Number of Sequences: 438
Number of extensions: 1397
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5138079
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)