Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt29g23
         (784 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC125232-1|AAI25233.1| 1500|Homo sapiens ABCA6 protein protein.        32   2.0  
BC125231-1|AAI25232.1| 1500|Homo sapiens ABCA6 protein protein.        32   2.0  
BC070125-1|AAH70125.1|  185|Homo sapiens ABCA6 protein protein.        32   2.0  
AY028898-1|AAK30023.1| 1617|Homo sapiens ATP-binding cassette A6...    32   2.0  
AF373328-1|AAM77558.1| 1617|Homo sapiens ABC transporter ABCA6 p...    32   2.0  
AF373290-1|AAM77557.1| 1617|Homo sapiens ABC transporter ABCA6 p...    32   2.0  
BC104855-1|AAI04856.1|  328|Homo sapiens OR13A1 protein protein.       30   8.2  
BC104853-1|AAI04854.1|  328|Homo sapiens OR13A1 protein protein.       30   8.2  
AL512324-4|CAH73801.1|  308|Homo sapiens olfactory receptor, fam...    30   8.2  
AB065728-1|BAC05949.1|  308|Homo sapiens seven transmembrane hel...    30   8.2  

>BC125232-1|AAI25233.1| 1500|Homo sapiens ABCA6 protein protein.
          Length = 1500

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
 Frame = -3

Query: 674 IKTFNYNNLLVPYS-VTYILYEIINRACYKYTLK--SVKFYRKKKHLQNLFLSLRPYKLF 504
           +  FN ++L+V Y+ ++ +  +I+N+      LK  SV     K H+  + L   PY + 
Sbjct: 67  VDKFNSSSLMVVYTPISNLTQQIMNKTALAPLLKGTSVIGAPNKTHMDEILLENLPYAMG 126

Query: 503 DILTSSMDLKLPFYYYYS 450
            I   +   KL F+  Y+
Sbjct: 127 IIFNETFSYKLIFFQGYN 144


>BC125231-1|AAI25232.1| 1500|Homo sapiens ABCA6 protein protein.
          Length = 1500

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
 Frame = -3

Query: 674 IKTFNYNNLLVPYS-VTYILYEIINRACYKYTLK--SVKFYRKKKHLQNLFLSLRPYKLF 504
           +  FN ++L+V Y+ ++ +  +I+N+      LK  SV     K H+  + L   PY + 
Sbjct: 67  VDKFNSSSLMVVYTPISNLTQQIMNKTALAPLLKGTSVIGAPNKTHMDEILLENLPYAMG 126

Query: 503 DILTSSMDLKLPFYYYYS 450
            I   +   KL F+  Y+
Sbjct: 127 IIFNETFSYKLIFFQGYN 144


>BC070125-1|AAH70125.1|  185|Homo sapiens ABCA6 protein protein.
          Length = 185

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
 Frame = -3

Query: 674 IKTFNYNNLLVPYS-VTYILYEIINRACYKYTLK--SVKFYRKKKHLQNLFLSLRPYKLF 504
           +  FN ++L+V Y+ ++ +  +I+N+      LK  SV     K H+  + L   PY + 
Sbjct: 67  VDKFNSSSLMVVYTPISNLTQQIMNKTALAPLLKGTSVIGAPNKTHMDEILLENLPYAMG 126

Query: 503 DILTSSMDLKLPFYYYYS 450
            I   +   KL F+  Y+
Sbjct: 127 IIFNETFSYKLIFFQGYN 144


>AY028898-1|AAK30023.1| 1617|Homo sapiens ATP-binding cassette A6
           protein.
          Length = 1617

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
 Frame = -3

Query: 674 IKTFNYNNLLVPYS-VTYILYEIINRACYKYTLK--SVKFYRKKKHLQNLFLSLRPYKLF 504
           +  FN ++L+V Y+ ++ +  +I+N+      LK  SV     K H+  + L   PY + 
Sbjct: 67  VDKFNSSSLMVVYTPISNLTQQIMNKTALAPLLKGTSVIGAPNKTHMDEILLENLPYAMG 126

Query: 503 DILTSSMDLKLPFYYYYS 450
            I   +   KL F+  Y+
Sbjct: 127 IIFNETFSYKLIFFQGYN 144


>AF373328-1|AAM77558.1| 1617|Homo sapiens ABC transporter ABCA6
           protein.
          Length = 1617

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
 Frame = -3

Query: 674 IKTFNYNNLLVPYS-VTYILYEIINRACYKYTLK--SVKFYRKKKHLQNLFLSLRPYKLF 504
           +  FN ++L+V Y+ ++ +  +I+N+      LK  SV     K H+  + L   PY + 
Sbjct: 67  VDKFNSSSLMVVYTPISNLTQQIMNKTALAPLLKGTSVIGAPNKTHMDEILLENLPYAMG 126

Query: 503 DILTSSMDLKLPFYYYYS 450
            I   +   KL F+  Y+
Sbjct: 127 IIFNETFSYKLIFFQGYN 144


>AF373290-1|AAM77557.1| 1617|Homo sapiens ABC transporter ABCA6
           protein.
          Length = 1617

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
 Frame = -3

Query: 674 IKTFNYNNLLVPYS-VTYILYEIINRACYKYTLK--SVKFYRKKKHLQNLFLSLRPYKLF 504
           +  FN ++L+V Y+ ++ +  +I+N+      LK  SV     K H+  + L   PY + 
Sbjct: 67  VDKFNSSSLMVVYTPISNLTQQIMNKTALAPLLKGTSVIGAPNKTHMDEILLENLPYAMG 126

Query: 503 DILTSSMDLKLPFYYYYS 450
            I   +   KL F+  Y+
Sbjct: 127 IIFNETFSYKLIFFQGYN 144


>BC104855-1|AAI04856.1|  328|Homo sapiens OR13A1 protein protein.
          Length = 328

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 12/31 (38%), Positives = 23/31 (74%), Gaps = 4/31 (12%)
 Frame = +2

Query: 515 TGVMIRID----SVNVFFFCKI*PILMYTCN 595
           TG+M+R+D    +V + FFC++ P+L+ +C+
Sbjct: 178 TGLMLRLDFCGPNVIIHFFCEVPPLLLLSCS 208


>BC104853-1|AAI04854.1|  328|Homo sapiens OR13A1 protein protein.
          Length = 328

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 12/31 (38%), Positives = 23/31 (74%), Gaps = 4/31 (12%)
 Frame = +2

Query: 515 TGVMIRID----SVNVFFFCKI*PILMYTCN 595
           TG+M+R+D    +V + FFC++ P+L+ +C+
Sbjct: 178 TGLMLRLDFCGPNVIIHFFCEVPPLLLLSCS 208


>AL512324-4|CAH73801.1|  308|Homo sapiens olfactory receptor, family
           13, subfamily A, member 1 protein.
          Length = 308

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 12/31 (38%), Positives = 23/31 (74%), Gaps = 4/31 (12%)
 Frame = +2

Query: 515 TGVMIRID----SVNVFFFCKI*PILMYTCN 595
           TG+M+R+D    +V + FFC++ P+L+ +C+
Sbjct: 158 TGLMLRLDFCGPNVIIHFFCEVPPLLLLSCS 188


>AB065728-1|BAC05949.1|  308|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 308

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 12/31 (38%), Positives = 23/31 (74%), Gaps = 4/31 (12%)
 Frame = +2

Query: 515 TGVMIRID----SVNVFFFCKI*PILMYTCN 595
           TG+M+R+D    +V + FFC++ P+L+ +C+
Sbjct: 158 TGLMLRLDFCGPNVIIHFFCEVPPLLLLSCS 188


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,930,863
Number of Sequences: 237096
Number of extensions: 1720078
Number of successful extensions: 2197
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2197
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)