Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt29g23
         (784 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   3.2  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   3.2  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   3.2  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   7.4  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    22   7.4  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    22   7.4  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   9.8  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 710 MI*LLYWAGFHNNKINKLVY 769
           M+  + W G+ N+ +N L+Y
Sbjct: 362 MVYFITWLGYVNSALNPLIY 381


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 710 MI*LLYWAGFHNNKINKLVY 769
           M+  + W G+ N+ +N L+Y
Sbjct: 362 MVYFITWLGYVNSALNPLIY 381


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 710 MI*LLYWAGFHNNKINKLVY 769
           M+  + W G+ N+ +N L+Y
Sbjct: 362 MVYFITWLGYVNSALNPLIY 381


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +2

Query: 719 LLYWAGFHNNKINKLVY 769
           +L W G+ N+  N ++Y
Sbjct: 309 VLTWLGYSNSAFNPIIY 325


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 680 ISIKTFNYNNLLVPYSVTYILYEIIN 603
           IS   +NY N    Y+   + Y IIN
Sbjct: 304 ISSNNYNYKNYNNNYNSKKLYYNIIN 329


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 680 ISIKTFNYNNLLVPYSVTYILYEIIN 603
           IS   +NY N    Y+   + Y IIN
Sbjct: 315 ISSNNYNYKNYNNNYNSKKLYYNIIN 340


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +2

Query: 719 LLYWAGFHNNKINKLVY 769
           L  W G+ N+ +N ++Y
Sbjct: 411 LFLWLGYCNSLLNPIIY 427


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,774
Number of Sequences: 438
Number of extensions: 3866
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)