Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt29g14
(710 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 24 1.2
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 24 1.2
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 24 1.2
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 24 1.2
AY082691-1|AAL92482.1| 77|Apis mellifera preprosecapin protein. 24 1.2
M12598-1|AAA27733.1| 77|Apis mellifera protein ( Bee preprosec... 23 2.2
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 23 2.2
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 5.0
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 5.0
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 5.0
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 5.0
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 5.0
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 6.6
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 6.6
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 6.6
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 6.6
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 6.6
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 6.6
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 6.6
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 6.6
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 24.2 bits (50), Expect = 1.2
Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Frame = -3
Query: 519 ERGSSCRPLVFLIYKRALMHNHC*TVRQQQRQNVFYFSTSPVP-PY-WQALFCNFPRQCS 346
ER S P + +HN+ ++ Q N+ Y PVP P + NFP +
Sbjct: 72 ERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVPVPVPVPVYYGNFPPRSM 131
Query: 345 SNKS*LQSKI--YRTFRQKRRFPLFL 274
+Q +I +R FP F+
Sbjct: 132 GPWISIQEQIPRFRHIGPSTPFPRFI 157
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 24.2 bits (50), Expect = 1.2
Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Frame = -3
Query: 519 ERGSSCRPLVFLIYKRALMHNHC*TVRQQQRQNVFYFSTSPVP-PY-WQALFCNFPRQCS 346
ER S P + +HN+ ++ Q N+ Y PVP P + NFP +
Sbjct: 72 ERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVPVPVPVPVYYGNFPPRSM 131
Query: 345 SNKS*LQSKI--YRTFRQKRRFPLFL 274
+Q +I +R FP F+
Sbjct: 132 GPWISIQEQIPRFRHIGPSTPFPRFI 157
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 24.2 bits (50), Expect = 1.2
Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Frame = -3
Query: 519 ERGSSCRPLVFLIYKRALMHNHC*TVRQQQRQNVFYFSTSPVP-PY-WQALFCNFPRQCS 346
ER S P + +HN+ ++ Q N+ Y PVP P + NFP +
Sbjct: 72 ERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVPVPVPVPVYYGNFPPRSM 131
Query: 345 SNKS*LQSKI--YRTFRQKRRFPLFL 274
+Q +I +R FP F+
Sbjct: 132 GPWISIQEQIPRFRHIGPSTPFPRFI 157
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 24.2 bits (50), Expect = 1.2
Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Frame = -3
Query: 519 ERGSSCRPLVFLIYKRALMHNHC*TVRQQQRQNVFYFSTSPVP-PY-WQALFCNFPRQCS 346
ER S P + +HN+ ++ Q N+ Y PVP P + NFP +
Sbjct: 305 ERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVPVPVPVPVYYGNFPPRSM 364
Query: 345 SNKS*LQSKI--YRTFRQKRRFPLFL 274
+Q +I +R FP F+
Sbjct: 365 GPWISIQEQIPRFRHIGPSTPFPRFI 390
>AY082691-1|AAL92482.1| 77|Apis mellifera preprosecapin protein.
Length = 77
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 75 TTILFSFVLPFLIIQPDSTAISSQL 1
T +LFSFV+ LII A+S+ +
Sbjct: 13 TVLLFSFVVILLIIPSKCEAVSNDM 37
>M12598-1|AAA27733.1| 77|Apis mellifera protein ( Bee
preprosecapin mRNA, complete cds. ).
Length = 77
Score = 23.4 bits (48), Expect = 2.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 75 TTILFSFVLPFLIIQPDSTAISS 7
T +LFSFV+ LII A+S+
Sbjct: 13 TVLLFSFVVILLIIPSKCEAVSN 35
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 23.4 bits (48), Expect = 2.2
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = -3
Query: 519 ERGSSCRPLVFLIYKRALMHNHC*TVRQQQRQNVFYFSTSPVP 391
ER S P + +HN+ ++ Q N+ Y PVP
Sbjct: 72 ERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVP 114
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.2 bits (45), Expect = 5.0
Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +1
Query: 622 LKEQYSITTI--ILFSNTSLKEPIKIHWR 702
L++ S+T++ L N ++ PIK+ WR
Sbjct: 225 LRKSPSLTSLNAYLIKNQTITCPIKVSWR 253
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.2 bits (45), Expect = 5.0
Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +1
Query: 622 LKEQYSITTI--ILFSNTSLKEPIKIHWR 702
L++ S+T++ L N ++ PIK+ WR
Sbjct: 225 LRKSPSLTSLNAYLIKNQTITCPIKVSWR 253
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.2 bits (45), Expect = 5.0
Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +1
Query: 622 LKEQYSITTI--ILFSNTSLKEPIKIHWR 702
L++ S+T++ L N ++ PIK+ WR
Sbjct: 276 LRKSPSLTSLNAYLIKNQTITCPIKVSWR 304
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.2 bits (45), Expect = 5.0
Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +1
Query: 622 LKEQYSITTI--ILFSNTSLKEPIKIHWR 702
L++ S+T++ L N ++ PIK+ WR
Sbjct: 225 LRKSPSLTSLNAYLIKNQTITCPIKVSWR 253
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 5.0
Identities = 19/84 (22%), Positives = 31/84 (36%), Gaps = 2/84 (2%)
Frame = -3
Query: 519 ERGSSCRPLVFLIYKRALMHNHC*TVRQQQRQNVFYFSTSPVPPYWQALFCNFPRQCSSN 340
ER S P + +N+ + N+ Y PVP + + NFP +
Sbjct: 305 EREKSKEPKIISSLSNNYNYNNYNNNYKPLHYNINYIEQIPVPVPFPVYYGNFPPRPMGP 364
Query: 339 KS*LQSKI--YRTFRQKRRFPLFL 274
+Q +I +R FP F+
Sbjct: 365 FVSIQEQIPRFRYIGPPTSFPRFI 388
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/29 (27%), Positives = 12/29 (41%)
Frame = +3
Query: 528 YQYERFGIHYNPSYMTFQFLEGGTKPTLF 614
Y Y + +Y P Y ++E P F
Sbjct: 89 YNYNNYNNNYKPLYYNINYIEQIPVPVPF 117
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/29 (27%), Positives = 12/29 (41%)
Frame = +3
Query: 528 YQYERFGIHYNPSYMTFQFLEGGTKPTLF 614
Y Y + +Y P Y ++E P F
Sbjct: 89 YNYNNYNNNYKPLYYNINYIEQIPVPVPF 117
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/29 (27%), Positives = 12/29 (41%)
Frame = +3
Query: 528 YQYERFGIHYNPSYMTFQFLEGGTKPTLF 614
Y Y + +Y P Y ++E P F
Sbjct: 89 YNYNNYNNNYKPLYYNINYIEQIPVPVPF 117
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/29 (27%), Positives = 12/29 (41%)
Frame = +3
Query: 528 YQYERFGIHYNPSYMTFQFLEGGTKPTLF 614
Y Y + +Y P Y ++E P F
Sbjct: 89 YNYNNYNNNYKPLYYNINYIEQIPVPVPF 117
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/29 (27%), Positives = 12/29 (41%)
Frame = +3
Query: 528 YQYERFGIHYNPSYMTFQFLEGGTKPTLF 614
Y Y + +Y P Y ++E P F
Sbjct: 322 YNYNNYNNNYKPLYYNINYIEQIPVPVPF 350
Score = 21.4 bits (43), Expect = 8.7
Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = -3
Query: 423 NVFYFSTSPVPPYWQALFCNFPRQCSSNKS*LQSKI--YRTFRQKRRFPLFL 274
N+ Y PVP + + NFP + +Q +I +R FP F+
Sbjct: 337 NINYIEQIPVPVPFPVYYGNFPPRPMGPFVSIQEQIPRFRYIGPPTSFPRFI 388
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/29 (27%), Positives = 12/29 (41%)
Frame = +3
Query: 528 YQYERFGIHYNPSYMTFQFLEGGTKPTLF 614
Y Y + +Y P Y ++E P F
Sbjct: 322 YNYNNYNNNYKPLYYNINYIEQIPVPVPF 350
Score = 21.4 bits (43), Expect = 8.7
Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = -3
Query: 423 NVFYFSTSPVPPYWQALFCNFPRQCSSNKS*LQSKI--YRTFRQKRRFPLFL 274
N+ Y PVP + + NFP + +Q +I +R FP F+
Sbjct: 337 NINYIEQIPVPVPFPVYYGNFPPRPMGPFVSIQEQIPRFRYIGPPTSFPRFI 388
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/29 (27%), Positives = 12/29 (41%)
Frame = +3
Query: 528 YQYERFGIHYNPSYMTFQFLEGGTKPTLF 614
Y Y + +Y P Y ++E P F
Sbjct: 322 YNYNNYNNNYKPLYYNINYIEQIPVPVPF 350
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/29 (27%), Positives = 12/29 (41%)
Frame = +3
Query: 528 YQYERFGIHYNPSYMTFQFLEGGTKPTLF 614
Y Y + +Y P Y ++E P F
Sbjct: 311 YNYNNYNNNYKPLYYNINYIEQIPVPVPF 339
Score = 21.4 bits (43), Expect = 8.7
Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = -3
Query: 423 NVFYFSTSPVPPYWQALFCNFPRQCSSNKS*LQSKI--YRTFRQKRRFPLFL 274
N+ Y PVP + + NFP + +Q +I +R FP F+
Sbjct: 326 NINYIEQIPVPVPFPVYYGNFPPRPMGPFVSIQEQIPRFRYIGPPTSFPRFI 377
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,229
Number of Sequences: 438
Number of extensions: 5589
Number of successful extensions: 32
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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