Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt29g03
(812 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1235.13 |ght6|meu12|hexose transporter Ght6 |Schizosaccharom... 50 3e-07
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 50 4e-07
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 49 7e-07
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 47 3e-06
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 44 3e-05
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ... 43 5e-05
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 42 1e-04
SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces ... 41 2e-04
SPCC965.13 |||membrane transporter|Schizosaccharomyces pombe|chr... 36 0.005
SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|c... 35 0.016
SPCC61.01c |str2|str1, SPCC622.20c|siderophore-iron transporter ... 33 0.048
SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux transporte... 31 0.26
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 29 0.59
SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyce... 29 0.79
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 29 1.0
SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|c... 29 1.0
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo... 28 1.4
SPBC1861.06c |mug131||S. pombe specific UPF0300 family protein 4... 28 1.8
SPCC576.17c |||membrane transporter|Schizosaccharomyces pombe|ch... 27 3.2
SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|ch... 27 3.2
SPCC4B3.13 |||MatE family transporter|Schizosaccharomyces pombe|... 27 3.2
SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein Urb1|Schi... 27 4.2
SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier ... 27 4.2
SPAC16E8.02 |||DUF962 family protein|Schizosaccharomyces pombe|c... 26 5.5
SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|ch... 26 5.5
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 26 5.5
SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein |S... 26 5.5
SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy... 26 7.3
SPAC6F12.10c |ade3|min11|phosphoribosylformylglycinamidine synth... 26 7.3
SPCC18.04 |pof6||F-box protein Pof6|Schizosaccharomyces pombe|ch... 25 9.7
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 25 9.7
SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like |Schizosacch... 25 9.7
SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyce... 25 9.7
SPAC19G12.13c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 9.7
SPCC1795.02c ||SPCC895.01|CaCA proton/calcium exchanger|Schizosa... 25 9.7
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 25 9.7
SPBC1347.13c |||ribose methyltransferase|Schizosaccharomyces pom... 25 9.7
SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr ... 25 9.7
>SPCC1235.13 |ght6|meu12|hexose transporter Ght6
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 535
Score = 50.4 bits (115), Expect = 3e-07
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Frame = +3
Query: 429 GALLSGPLVDYFGRKKANF---LVNIPHLIAWILMYFAWNVPILFIANTLLGIGTGIMEA 599
G LLS PL D FG++K LV I +I + +W + +A G+G G +
Sbjct: 72 GCLLSSPLGDRFGKRKCIMGWTLVYITGVIVQLTTIPSWVQ--MMVAKIWTGLGIGALSV 129
Query: 600 PINSYVGEISEPTMRGALCTVTQIFTSIGILV 695
Y E S P +RGA+ T Q+F ++GI +
Sbjct: 130 IAPGYQSESSPPHIRGAIVTTYQLFITLGIFI 161
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 50.0 bits (114), Expect = 4e-07
Identities = 31/127 (24%), Positives = 59/127 (46%)
Frame = +3
Query: 333 ALPALLNATEGLSQTQVEASWFGSISYLAQPFGALLSGPLVDYFGRKKANFLVNIPHLIA 512
AL + + G T + S + L G +++G L D+FGRK + +I ++
Sbjct: 111 ALVVIGTSLGGHELTNGGKEFITSATSLGALLGGIIAGALADFFGRKPVIAIASIIIIVG 170
Query: 513 WILMYFAWNVPILFIANTLLGIGTGIMEAPINSYVGEISEPTMRGALCTVTQIFTSIGIL 692
I+ A ++ + + ++G G GI I Y+ EI+ +RG L + + + G +
Sbjct: 171 SIVQVTAHHLWHMIVGRFVIGWGVGIASLIIPLYLSEIAPSKIRGRLVIIYVLLITAGQV 230
Query: 693 VMYFLGT 713
+ Y + T
Sbjct: 231 IAYGIDT 237
>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
Ght7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 49.2 bits (112), Expect = 7e-07
Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Frame = +3
Query: 426 FGALLSGPLVDYFGRKKANFLVNIPHLIAWILMYF---AWNVPILFIANTLLGIGTGIME 596
FG LLS P+ D G++ + + +LI I+ +W V IL +A G+ G +
Sbjct: 39 FGCLLSSPVADKIGKRLSIIVWTTVYLIGIIIQVTTVPSW-VQIL-VAKIWTGLSIGALS 96
Query: 597 APINSYVGEISEPTMRGALCTVTQIFTSIGILV---------MYFLGTIVDWRQAAIICX 749
Y E++ MRGA+ T Q+F ++GI + Y GT WR + I
Sbjct: 97 VITPGYQSEVAPAIMRGAIVTTYQLFITLGIFIAACINMGTHKYSHGTTAQWRISIGINL 156
Query: 750 XXXXXXXXXXXXXPETPVWLL 812
PE+P +L+
Sbjct: 157 LWGIITLVGIIFLPESPRYLI 177
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 47.2 bits (107), Expect = 3e-06
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +3
Query: 426 FGALLSGPLVDYFGRKKANFLVNIPHLIAWILMYFAWNVPI-LFIANTLLGIGTGIMEAP 602
FGA+LS P + G+K + + ++IA +L+ A I + + L G+G G +
Sbjct: 71 FGAMLSSPFTERIGKKYSICFFSGVYIIAELLLVTAVPSWIQVLVGKILAGVGIGALSVL 130
Query: 603 INSYVGEISEPTMRGALCTVTQIFTSIGILV 695
Y E++ P +RGA+ QIF++ LV
Sbjct: 131 SPGYQSEVAPPQIRGAVVATYQIFSTGAALV 161
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 43.6 bits (98), Expect = 3e-05
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Frame = +3
Query: 426 FGALLSGPLVDYFGRKKANF---LVNIPHLIAWILMYFAWNVPILFIANTLLGIGTGIME 596
FG ++S P+ D FG++ + V I +I + +W V I+ +A GIG G +
Sbjct: 75 FGCIISSPIADRFGKRLSIIGFCAVYIIGIIVQVTAVPSW-VQIM-VAKIWTGIGIGALS 132
Query: 597 APINSYVGEISEPTMRGALCTVTQIFTSIGILV 695
Y E + P++RG + Q+F + GI +
Sbjct: 133 VLAPGYQSETAPPSIRGTVVVTYQLFVTGGIFI 165
>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 557
Score = 43.2 bits (97), Expect = 5e-05
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +3
Query: 426 FGALLSGPLVDYFGRKKANFLVNIPHLIAWILMYFAWNVPI-LFIANTLLGIGTGIMEAP 602
FGA+LS P + G+K + + ++I IL+ A + + + G+ G +
Sbjct: 71 FGAMLSSPFTEAIGKKYSIAFFSGCYIIGQILLVTAVPSWVQIMVGKLFTGLTIGALSVL 130
Query: 603 INSYVGEISEPTMRGALCTVTQIFTSIGILV 695
Y E++ P +RGA+ + Q+F + G L+
Sbjct: 131 SPGYQSEVAPPQIRGAVVSTYQLFQTCGTLI 161
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 41.5 bits (93), Expect = 1e-04
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +3
Query: 426 FGALLSGPLVDYFGRKKANFLVNIPHLIAWILMYFAWNVPI-LFIANTLLGIGTGIMEAP 602
FG L+S P D G++ + + +LI I+ A + + +A G+G G +
Sbjct: 71 FGCLISSPTTDRIGKRNSIIGFCVIYLIGVIIQVTAVPSWVQIMVAKIWTGLGIGALSVL 130
Query: 603 INSYVGEISEPTMRGALCTVTQIFTSIGILV 695
Y E++ P +RG + Q+ + GI +
Sbjct: 131 APGYQSEVAPPHIRGTIVVTYQLCVTAGIFI 161
>SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 546
Score = 40.7 bits (91), Expect = 2e-04
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Frame = +3
Query: 426 FGALLSGPLVDYFGRKKANFLVNIPHLIAWILMYFAWNVPI---LFIANTLLGIGTGIME 596
FG LS PL+D G++ + I +LI IL A VP + +A G+ G +
Sbjct: 71 FGCFLSSPLMDRIGKRTSIMFWTIVYLIGIILQVTA--VPSWVQIMVAKIWTGLSIGALS 128
Query: 597 APINSYVGEISEPTMRGALCTVTQIFTSIGILV 695
+ E++ +RG + T Q+ + GI +
Sbjct: 129 VLAPGFQSEVAPADLRGTIVTTYQLAVTGGIFI 161
>SPCC965.13 |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 537
Score = 36.3 bits (80), Expect = 0.005
Identities = 24/82 (29%), Positives = 39/82 (47%)
Frame = +3
Query: 402 SISYLAQPFGALLSGPLVDYFGRKKANFLVNIPHLIAWILMYFAWNVPILFIANTLLGIG 581
S+ + FG +L GP+ D FGRK I ++I I A+N+P++ I + + G
Sbjct: 132 SLFIVGNAFGPMLLGPMSDIFGRKWVYVGSLILYIIFQIPQALAYNLPMMAINSAIAGAF 191
Query: 582 TGIMEAPINSYVGEISEPTMRG 647
A + S + +I P G
Sbjct: 192 GSSALANVASSMCDIFTPETVG 213
>SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 599
Score = 34.7 bits (76), Expect = 0.016
Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 4/127 (3%)
Frame = +3
Query: 291 LLLDLGMAVSFPTIALPALLNATEGLSQTQVEASWFGSISYLAQPFGALLSGPLVDYFGR 470
L+L L +A TI AL E + T +SW GS LA G + GR
Sbjct: 102 LILTLFLAALDNTIVTTALPTIAEDFNDTS-SSSWIGSAYVLASNAVLPAVGVFCNILGR 160
Query: 471 KKANFLVNIPHLIAWILMYFAWNVPILFIANTLLGIGTGIMEAPINSYVGEI----SEPT 638
K ++ ++ L + N+ L + + G+G G + + +N + +I + P
Sbjct: 161 KIVLYICIFFFMLGSALCGASQNMIWLIVCRAIQGLGGGGIISLVNIIISDITPLRTRPM 220
Query: 639 MRGALCT 659
G L T
Sbjct: 221 YSGILAT 227
>SPCC61.01c |str2|str1, SPCC622.20c|siderophore-iron transporter
Str2 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 597
Score = 33.1 bits (72), Expect = 0.048
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Frame = +3
Query: 432 ALLSGPLVDYFGRKKANFLVNIPHLIAWILMYFAWNV-------PILFIANTLLGIGTGI 590
A+LSG L+ FGR K ++++P + IL + + P++ + L G+G G+
Sbjct: 403 AILSGFLMKRFGRFKMLLMISVPMYVLGILGIILFGINDNHYTRPLVLVL-ILAGMGGGL 461
Query: 591 MEAPINSYVGEISEPTMRGALCTVTQIFTSIG 686
+ V +S G T+ F+S+G
Sbjct: 462 LTLSAQIAVQSVSSHAKLGMNLTLYLTFSSVG 493
>SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 531
Score = 30.7 bits (66), Expect = 0.26
Identities = 23/83 (27%), Positives = 33/83 (39%)
Frame = +3
Query: 438 LSGPLVDYFGRKKANFLVNIPHLIAWILMYFAWNVPILFIANTLLGIGTGIMEAPINSYV 617
L G L D FGR+ N + + ++P L +A L GIG G + +
Sbjct: 85 LYGRLSDIFGRRPTVVFANAAFTLGTFWCGISRSLPELCMARALAGIGGGGLGTMSSIIS 144
Query: 618 GEISEPTMRGALCTVTQIFTSIG 686
+I RG +T I IG
Sbjct: 145 SDIVSLRERGTWQGITNIVWGIG 167
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 29.5 bits (63), Expect = 0.59
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Frame = +3
Query: 408 SYLAQPFGALLSGPLVDYFGRK---KANFLVNIPHLIAWILMYFAWNVPI-----LFIAN 563
S + FG L+ G + D+FGRK ++ I I I M + + P+ +F
Sbjct: 102 SNIGNIFGQLMFGFMGDFFGRKFVYGKEMIIVIIATILLIAMPKSIHSPLSKMMWVFCWR 161
Query: 564 TLLGIGTGIMEAPINSYV-GEISEPTMRGALCTVTQIFTSIGIL 692
LLG+G G + P+++ + E S+ RG L ++ F G L
Sbjct: 162 WLLGVGIG-GDYPMSAAITSERSKLNRRGTLISLIFAFQGFGTL 204
>SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 462
Score = 29.1 bits (62), Expect = 0.79
Identities = 22/105 (20%), Positives = 41/105 (39%)
Frame = +3
Query: 372 QTQVEASWFGSISYLAQPFGALLSGPLVDYFGRKKANFLVNIPHLIAWILMYFAWNVPIL 551
Q E + SI L ++S PL + FGR+ + N+ ++ + A +
Sbjct: 79 QNSTEKALILSIYLLVFAISPMISAPLSEVFGRRMLLQVGNVIFIVFNMACGLARTKAQM 138
Query: 552 FIANTLLGIGTGIMEAPINSYVGEISEPTMRGALCTVTQIFTSIG 686
+I L G G+ + + ++ P RG V + +G
Sbjct: 139 YIFRFLAGFGSATPMGLGSGTISDLFTPDERGKAVAVMSLAPLLG 183
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 28.7 bits (61), Expect = 1.0
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Frame = +3
Query: 426 FGALLSGPLVDYFGRKKANFLVNIPHLIAWILMY-FAWNVPI-------LFIANTLLGIG 581
FG +L G + D+FGRK I +IA +L+ ++P +F LLG+G
Sbjct: 103 FGQILFGFMGDFFGRKFVYGKEMIVVIIATVLVIALPKSIPTPLGKMMWIFAWRWLLGLG 162
Query: 582 TGIMEAPINSYV-GEISEPTMRGALCTVTQIFTSIGIL 692
G + P+++ + E S + RG L ++ F G L
Sbjct: 163 IG-GDYPMSATITSERSLLSRRGTLLSIVFSFQGFGTL 199
>SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 28.7 bits (61), Expect = 1.0
Identities = 30/138 (21%), Positives = 55/138 (39%), Gaps = 4/138 (2%)
Frame = +3
Query: 327 TIALPALLNATEGLSQTQVEASWFGSISYLAQPFGALLSGPLVDYFGRKKANFLVNIPHL 506
T A+P ++ +G S SW G+ LAQ G + + GRK + + L
Sbjct: 111 TTAIPTIVANLDGGSSY----SWIGTAYTLAQTSILPFCGIMSEVVGRKIVLYTSIVLFL 166
Query: 507 IAWILMYFAWNVPILFIANTLLGIGTGIMEAPINSYVGEI----SEPTMRGALCTVTQIF 674
+ A N+ L + + GIG G + + + + +I + P G + +
Sbjct: 167 FGSAMCGAAQNMLWLVLCRAVQGIGGGGITSLVTIVIADITPLQTRPYYTGCMGVTWGLA 226
Query: 675 TSIGILVMYFLGTIVDWR 728
+ +G L+ + WR
Sbjct: 227 SVMGPLIGGAISQKASWR 244
>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 572
Score = 28.3 bits (60), Expect = 1.4
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Frame = +3
Query: 426 FGALLSGPLVDYFGRK---KANFLVNIPHLIAWILMYFAWNVPI-----LFIANTLLGIG 581
FG LL G + D+FGRK ++ I + I M + + P+ +F LLG+G
Sbjct: 108 FGQLLFGFMGDFFGRKFVYGKEMVIVIIATVLVIAMPKSIHSPLSKMMWVFCWRWLLGVG 167
Query: 582 TGIMEAPINSYV-GEISEPTMRGALCTVTQIFTSIGIL 692
G + P+++ + E S+ RG L ++ F G L
Sbjct: 168 IG-GDYPMSAAITSERSKIKRRGTLISLIFAFQGFGTL 204
>SPBC1861.06c |mug131||S. pombe specific UPF0300 family protein
4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 433
Score = 27.9 bits (59), Expect = 1.8
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 647 SPMHRHSNIHVHWNIGNVFSGNNSRLATSGNHMSRSTTSFHAISFT 784
S H H NIHVH GN + + + + + +++T F ++ T
Sbjct: 277 STQHFHCNIHVHSVSGNAIRKSRNPIIQDLSSICQNSTEFGWLALT 322
>SPCC576.17c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 525
Score = 27.1 bits (57), Expect = 3.2
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
Frame = +3
Query: 288 LLLLDLGMAVSFPTIALPALLNATEGLSQTQVEASWFG-SISYLAQPFGALLSGPLVDYF 464
LL L M V + P + ++ L + S G S+ L G L GPL D
Sbjct: 85 LLSTSLQMYVFWTPNFYPGVQDSVMELWHLSSQVSLLGQSMFVLGVALGPLFLGPLSDLL 144
Query: 465 GRKKANFLVNIPHLIAWILMYFAWNVPILFIANTLLGI 578
GRK I ++ I A N L I+ ++G+
Sbjct: 145 GRKLVYIGSLIIYVCFCISCALARNYAQLVISMLIMGV 182
>SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 27.1 bits (57), Expect = 3.2
Identities = 29/138 (21%), Positives = 55/138 (39%), Gaps = 4/138 (2%)
Frame = +3
Query: 327 TIALPALLNATEGLSQTQVEASWFGSISYLAQPFGALLSGPLVDYFGRKKANFLVNIPHL 506
T A+P ++ +G S SW G+ LA+ G + + GRK + + L
Sbjct: 111 TTAIPTIVANLDGGSSY----SWIGTAYSLAETSILPFCGIMSEVVGRKIVLYTSIVLFL 166
Query: 507 IAWILMYFAWNVPILFIANTLLGIGTGIMEAPINSYVGEI----SEPTMRGALCTVTQIF 674
+ A N+ L + + GIG G + + + + +I + P G + +
Sbjct: 167 FGSAMCGAAQNMLWLVLCRAVQGIGGGGIMSLVTIVIADITPLQTRPYYTGCMGVTWGVA 226
Query: 675 TSIGILVMYFLGTIVDWR 728
+ +G L+ + WR
Sbjct: 227 SVMGPLIGGAISQNTTWR 244
>SPCC4B3.13 |||MatE family transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 539
Score = 27.1 bits (57), Expect = 3.2
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -3
Query: 267 LAVTGLI*ICSRTESFLQFEFCAPF*GILKLSKLSNMFVTKNLRFHYTY 121
LAV G+I ICS +F F + G +L+ +S + T L ++ +
Sbjct: 325 LAVPGVIMICSEYWAFELVTFASGVLGTTELASMSVLSTTSTLSYNLAF 373
>SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein
Urb1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1568
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 497 TSFNSLDLDVFC-LECTDFIYSKYSVRDWNRD 589
+ + +DL VF LE T+ + S Y +WNR+
Sbjct: 1297 SEWEKIDLKVFDDLETTEGLLSSYCSNEWNRE 1328
>SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier for
pyridoxine, pyridoxal, and pyridoxamine
Bsu1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 526
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +3
Query: 402 SISYLAQPFGALLSGPLVDYFGRKKANFLVNIPHLIAWILMYFAWNVPILFIANTLLGI 578
S++ L G + GPL D GRK F + + I N+ + I++ ++G+
Sbjct: 124 SMNILGSGLGPMFLGPLSDIGGRKPVYFCSIFVYTVFNISCALPRNIVQMIISHFIIGV 182
>SPAC16E8.02 |||DUF962 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 222
Score = 26.2 bits (55), Expect = 5.5
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = +3
Query: 426 FGALLSGPLVDYFGRKKANFLVNIPHLIAWILMYFAWNV 542
F +L L F R N + H+I WIL + V
Sbjct: 85 FSYILPSKLFTIFSRSLVNRSAAVVHVICWILQFIGHGV 123
>SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 644
Score = 26.2 bits (55), Expect = 5.5
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 7/107 (6%)
Frame = +3
Query: 345 LLNATEGLSQTQVEASWFGSISYLAQPFGALLSGPLVDYFGRKKANFLVNIPHLI---AW 515
L T G+S+ + FGS++ F G + D +GR+ F + + L+ W
Sbjct: 178 LAEITTGVSKVRAA---FGSLAAFLGLFSTAYYGTMGDIYGRRLVLF-ITVSFLLLGDLW 233
Query: 516 IL--MYFAWNVPILFIANTLLGIGTGI--MEAPINSYVGEISEPTMR 644
+L Y + + A L G+G I + A NS+V + S+ R
Sbjct: 234 LLYQSYAPKHPYFVLFAAALKGLGGYISTVVASQNSFVADCSKTEFR 280
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 26.2 bits (55), Expect = 5.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -2
Query: 388 ASTCV*DNPSVAFSKAGKAMVGKLTAIPRSNRSKFG 281
ASTC+ P+V+ S+ + V KL+++ N K G
Sbjct: 1054 ASTCIMSLPNVSASRIATSRVLKLSSLKPGNLHKSG 1089
>SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 971
Score = 26.2 bits (55), Expect = 5.5
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 483 FLVNIPHLIAWILMYFAWNVPILFIANTLLGIGTGIMEAPIN 608
FL+ IP +L FA VP++F+ ++GI +E P++
Sbjct: 327 FLLGIP-----LLRKFASKVPVIFLFLNVIGIAAYKLEDPVH 363
>SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 613
Score = 25.8 bits (54), Expect = 7.3
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 659 RHSNIHVHWNIGNVFSGNNSRLATSGNH-MSRST 757
+ S + +H+N VF G + R T+GNH ++R T
Sbjct: 473 QQSFVSLHFNDRPVFFGCDGRNTTAGNHTVTRDT 506
>SPAC6F12.10c |ade3|min11|phosphoribosylformylglycinamidine synthase
Ade3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1323
Score = 25.8 bits (54), Expect = 7.3
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 8/75 (10%)
Frame = +3
Query: 492 NIPHLIAWILMYFAWNVPILFIANTLLGIGTGIM--------EAPINSYVGEISEPTMRG 647
++ LIA M W VP+ + T+ G GI E PI++ V + M
Sbjct: 672 SVTGLIARDQMVGPWQVPVADVGVTVTSYGKGINTGEALAMGEKPISALVSAAASARMAV 731
Query: 648 ALCTVTQIFTSIGIL 692
A C + + SI L
Sbjct: 732 AECIMNLVAASIPAL 746
>SPCC18.04 |pof6||F-box protein Pof6|Schizosaccharomyces pombe|chr
3|||Manual
Length = 872
Score = 25.4 bits (53), Expect = 9.7
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +2
Query: 266 NSMYVSKLTSVGSW---YGRKLPNHSFTGFAECHRRIVSDASRGF 391
NS+YV KL + +W RKL S G ++ + + S+ S+GF
Sbjct: 67 NSIYVKKLLLMNAWDVTLSRKLYYESQDGMSQAN--MSSNTSKGF 109
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 25.4 bits (53), Expect = 9.7
Identities = 39/174 (22%), Positives = 67/174 (38%), Gaps = 5/174 (2%)
Frame = +3
Query: 234 VSKFRSVLSQLIACMSPNLLLLDLGMAVSFPTIALPALLNATEGLSQTQVEASWFGSISY 413
VSK S L +I + + +++ ++ T + AL N+T ++ IS
Sbjct: 560 VSKAYSCLETIIESLKTSPNIIETIISEDLITTIVNALTNSTSQNKSMHLQVQLLHIISS 619
Query: 414 LAQPFGALLSGPLVDYFGRKKANFLVNIP-----HLIAWILMYFAWNVPILFIANTLLGI 578
L Q AL+ L L IP H I M + PI I N L I
Sbjct: 620 LCQSSSALILPFLNHNLPDVMYEMLCGIPPSDTSHQADMITMQSLYYCPIELIENLLRAI 679
Query: 579 GTGIMEAPINSYVGEISEPTMRGALCTVTQIFTSIGILVMYFLGTIVDWRQAAI 740
T ++ ++ E + R + I ++ ++ +YF+ + D R A+
Sbjct: 680 -TSLLPKNTSNLSDEFNTKLYR-----LNSILLTV-VMDIYFIVPLHDIRSLAV 726
>SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1030
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 701 FSGNNSRLATSGNHMSRS 754
FSGNN R TSG +M S
Sbjct: 488 FSGNNFRWLTSGEYMQMS 505
>SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 583
Score = 25.4 bits (53), Expect = 9.7
Identities = 32/94 (34%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Frame = +3
Query: 429 GALLSGPLVDYFGRKKANFLVNIPHLIAWILMY-FAWNVPI-------LFIANTLLGIGT 584
G LL G L D+FGRK + +IA IL+ +P LF +LGIG
Sbjct: 99 GQLLFGFLGDFFGRKFVYGKEMMVVIIATILIICLPDRIPTPTAKMMWLFAFRVMLGIGI 158
Query: 585 GIMEAPINSYVGEISEPTMRGALCTVTQIFTSIG 686
G S E S RGAL + IF++ G
Sbjct: 159 GGDYPMSASITSEQSLINRRGAL--LAWIFSNQG 190
>SPAC19G12.13c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 25.4 bits (53), Expect = 9.7
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 114 DGNMYNESEDF**QTYYLILKVSIFLKMVHKIQIEEKIPSVSKFRSVLSQLIAC 275
D +NE E + + K I ++++ Q ++K+P SKF SVLS+ I C
Sbjct: 173 DWGSHNEKEM---EALQRLSKHKIRKRLIYVSQHKKKMPW-SKFNSVLSRYIQC 222
>SPCC1795.02c ||SPCC895.01|CaCA proton/calcium
exchanger|Schizosaccharomyces pombe|chr 3|||Manual
Length = 412
Score = 25.4 bits (53), Expect = 9.7
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +3
Query: 486 LVNIPHLIAWILMYFAWNVPILFIANTLLGIGTGIMEAPINSYVGEISEPTMRGAL 653
LV +P I I +F WN +FI N L I + + + IS PT+ GAL
Sbjct: 66 LVFVP--IGLIAGWFEWNAKSVFILNMLAIIPLASLLSFATEQLSIISGPTL-GAL 118
>SPBC3F6.05 |rga1||GTPase activating protein
Rga1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1150
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 530 CLECTDFIYSKYSVRDWNRDNGSANKFLCW 619
CL CT Y+ DW R N + C+
Sbjct: 508 CLSCTKCKYNNRENYDWARWNNQTKQIECY 537
>SPBC1347.13c |||ribose methyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 301
Score = 25.4 bits (53), Expect = 9.7
Identities = 17/52 (32%), Positives = 32/52 (61%)
Frame = +3
Query: 180 SIFLKMVHKIQIEEKIPSVSKFRSVLSQLIACMSPNLLLLDLGMAVSFPTIA 335
S F + ++K+Q + I SV+K L+Q+ AC N ++L+ +++ PTI+
Sbjct: 63 SEFEEFLNKLQYKIPIKSVNKEH--LNQITACRPHNGVVLE-ASSLNVPTIS 111
>SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 791
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 659 RHSNIHVHWNIGNVFSGNNSRLATSGNHMSRST 757
+ SN+H + N N FS +N+ ++S N +T
Sbjct: 727 KRSNVHKNNNASNTFSHSNASTSSSLNAAPNTT 759
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,661,975
Number of Sequences: 5004
Number of extensions: 83011
Number of successful extensions: 245
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 239
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 396433620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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