Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt29f24
         (613 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061360-1|AAL28908.1|  715|Drosophila melanogaster LD28629p pro...   214   7e-56
AE014296-2863|AAF49380.1|  715|Drosophila melanogaster CG7729-PA...   214   7e-56
AY118556-1|AAM49925.1|  708|Drosophila melanogaster LD36089p pro...   200   9e-52
AE014296-764|AAG22245.1|  708|Drosophila melanogaster CG14991-PB...   200   9e-52
AE014296-763|AAF47838.1|  708|Drosophila melanogaster CG14991-PA...   200   9e-52
AF299248-1|AAG22814.1| 2836|Drosophila melanogaster talin protein.     32   0.53 
AE014296-1476|AAF50399.1| 2836|Drosophila melanogaster CG6831-PA...    32   0.53 
M20316-1|AAA28311.1|  521|Drosophila melanogaster protein ( D.me...    29   3.7  

>AY061360-1|AAL28908.1|  715|Drosophila melanogaster LD28629p
           protein.
          Length = 715

 Score =  214 bits (523), Expect = 7e-56
 Identities = 95/152 (62%), Positives = 118/152 (77%)
 Frame = +1

Query: 139 VGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTESFGKEFKKDWSDHALWWPTRNK 318
           VG+ SWNL I++TDL  ++TM V+GD HIGG+ML+L +    E  KDWSDHALWWP RN 
Sbjct: 4   VGENSWNLRIFITDLALEKTMRVRGDQHIGGIMLQLVDP---ENPKDWSDHALWWPARNV 60

Query: 319 WLSRPKHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFIDCKIDFSIDTFSAVIQLCKNL 498
           WLSR K TLDQ GV AD+ LHFTPMHK LR+QLPDLR++D ++D+S+ TFSAV+ LCK L
Sbjct: 61  WLSRTKLTLDQCGVQADSLLHFTPMHKILRVQLPDLRYLDSRVDYSVKTFSAVVNLCKQL 120

Query: 499 GIRHSEELSLCYPLEASHLKQNYQNLKEAKRI 594
            IR+ EELSLC PLEA HLK+N+  +   KR+
Sbjct: 121 DIRYPEELSLCKPLEAEHLKRNFAQVPHQKRV 152


>AE014296-2863|AAF49380.1|  715|Drosophila melanogaster CG7729-PA
           protein.
          Length = 715

 Score =  214 bits (523), Expect = 7e-56
 Identities = 95/152 (62%), Positives = 118/152 (77%)
 Frame = +1

Query: 139 VGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTESFGKEFKKDWSDHALWWPTRNK 318
           VG+ SWNL I++TDL  ++TM V+GD HIGG+ML+L +    E  KDWSDHALWWP RN 
Sbjct: 4   VGENSWNLRIFITDLALEKTMRVRGDQHIGGIMLQLVDP---ENPKDWSDHALWWPARNV 60

Query: 319 WLSRPKHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFIDCKIDFSIDTFSAVIQLCKNL 498
           WLSR K TLDQ GV AD+ LHFTPMHK LR+QLPDLR++D ++D+S+ TFSAV+ LCK L
Sbjct: 61  WLSRTKLTLDQCGVQADSLLHFTPMHKILRVQLPDLRYLDSRVDYSVKTFSAVVNLCKQL 120

Query: 499 GIRHSEELSLCYPLEASHLKQNYQNLKEAKRI 594
            IR+ EELSLC PLEA HLK+N+  +   KR+
Sbjct: 121 DIRYPEELSLCKPLEAEHLKRNFAQVPHQKRV 152


>AY118556-1|AAM49925.1|  708|Drosophila melanogaster LD36089p
           protein.
          Length = 708

 Score =  200 bits (489), Expect = 9e-52
 Identities = 87/150 (58%), Positives = 112/150 (74%)
 Frame = +1

Query: 139 VGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTESFGKEFKKDWSDHALWWPTRNK 318
           VG+ +WNL I +TDL  ++T+ VKGD HIGGVML L +    E  KDWSDHALWWP +N 
Sbjct: 4   VGENTWNLRILITDLQVEKTLRVKGDQHIGGVMLNLVDP---ELPKDWSDHALWWPAKNI 60

Query: 319 WLSRPKHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFIDCKIDFSIDTFSAVIQLCKNL 498
           WL+R + TLDQ GV +D+ LHFTPMHK LR+Q+PDLR++D +++FS  TF AV+ LCK+L
Sbjct: 61  WLTRTRSTLDQAGVQSDSFLHFTPMHKTLRVQMPDLRYLDYRVNFSAKTFGAVVSLCKDL 120

Query: 499 GIRHSEELSLCYPLEASHLKQNYQNLKEAK 588
            IR+ EELS C PLE  HLK+N+  L + K
Sbjct: 121 DIRYPEELSFCKPLEPEHLKKNFSKLPQRK 150


>AE014296-764|AAG22245.1|  708|Drosophila melanogaster CG14991-PB,
           isoform B protein.
          Length = 708

 Score =  200 bits (489), Expect = 9e-52
 Identities = 87/150 (58%), Positives = 112/150 (74%)
 Frame = +1

Query: 139 VGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTESFGKEFKKDWSDHALWWPTRNK 318
           VG+ +WNL I +TDL  ++T+ VKGD HIGGVML L +    E  KDWSDHALWWP +N 
Sbjct: 4   VGENTWNLRILITDLQVEKTLRVKGDQHIGGVMLNLVDP---ELPKDWSDHALWWPAKNI 60

Query: 319 WLSRPKHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFIDCKIDFSIDTFSAVIQLCKNL 498
           WL+R + TLDQ GV +D+ LHFTPMHK LR+Q+PDLR++D +++FS  TF AV+ LCK+L
Sbjct: 61  WLTRTRSTLDQAGVQSDSFLHFTPMHKTLRVQMPDLRYLDYRVNFSAKTFGAVVSLCKDL 120

Query: 499 GIRHSEELSLCYPLEASHLKQNYQNLKEAK 588
            IR+ EELS C PLE  HLK+N+  L + K
Sbjct: 121 DIRYPEELSFCKPLEPEHLKKNFSKLPQRK 150


>AE014296-763|AAF47838.1|  708|Drosophila melanogaster CG14991-PA,
           isoform A protein.
          Length = 708

 Score =  200 bits (489), Expect = 9e-52
 Identities = 87/150 (58%), Positives = 112/150 (74%)
 Frame = +1

Query: 139 VGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTESFGKEFKKDWSDHALWWPTRNK 318
           VG+ +WNL I +TDL  ++T+ VKGD HIGGVML L +    E  KDWSDHALWWP +N 
Sbjct: 4   VGENTWNLRILITDLQVEKTLRVKGDQHIGGVMLNLVDP---ELPKDWSDHALWWPAKNI 60

Query: 319 WLSRPKHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFIDCKIDFSIDTFSAVIQLCKNL 498
           WL+R + TLDQ GV +D+ LHFTPMHK LR+Q+PDLR++D +++FS  TF AV+ LCK+L
Sbjct: 61  WLTRTRSTLDQAGVQSDSFLHFTPMHKTLRVQMPDLRYLDYRVNFSAKTFGAVVSLCKDL 120

Query: 499 GIRHSEELSLCYPLEASHLKQNYQNLKEAK 588
            IR+ EELS C PLE  HLK+N+  L + K
Sbjct: 121 DIRYPEELSFCKPLEPEHLKKNFSKLPQRK 150


>AF299248-1|AAG22814.1| 2836|Drosophila melanogaster talin protein.
          Length = 2836

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 19/70 (27%), Positives = 31/70 (44%)
 Frame = +1

Query: 319 WLSRPKHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFIDCKIDFSIDTFSAVIQLCKNL 498
           WL  P  TL  Y +H    L +    + LR+++ D       +D S      ++ +C  +
Sbjct: 63  WLE-PGRTLGYYILHNQDTLEYRRKTRTLRVRMLDGAVKTILVDDSQPVSQLMVVICTKI 121

Query: 499 GIRHSEELSL 528
           GI + EE  L
Sbjct: 122 GITNHEEYGL 131


>AE014296-1476|AAF50399.1| 2836|Drosophila melanogaster CG6831-PA
           protein.
          Length = 2836

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 19/70 (27%), Positives = 31/70 (44%)
 Frame = +1

Query: 319 WLSRPKHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFIDCKIDFSIDTFSAVIQLCKNL 498
           WL  P  TL  Y +H    L +    + LR+++ D       +D S      ++ +C  +
Sbjct: 63  WLE-PGRTLGYYILHNQDTLEYRRKTRTLRVRMLDGAVKTILVDDSQPVSQLMVVICTKI 121

Query: 499 GIRHSEELSL 528
           GI + EE  L
Sbjct: 122 GITNHEEYGL 131


>M20316-1|AAA28311.1|  521|Drosophila melanogaster protein (
           D.melanogaster acetylcholinereceptor-related protein
           mRNA, complete cds. ).
          Length = 521

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 4/106 (3%)
 Frame = +1

Query: 160 LTIYVTDLNEKRTMVVKGDMHIGGVMLKLTESFGKEFKKDWSDHALWWPTRNKWLSRPKH 339
           +T+ + + N +     +  M+I  + L    +F   F K      L W      +S P H
Sbjct: 316 VTVIIINWNFRGPRTHRMPMYIRSIFLHYLPAF--LFMKRPRKTRLRWMMEMPGMSMPAH 373

Query: 340 TLDQYGVHADAALHFTPM----HKPLRIQLPDLRFIDCKIDFSIDT 465
               YG  AD   H + +     K   ++L DL   +CKI+  +++
Sbjct: 374 PHPSYGSPADVPKHISAIGGKQSKMEVMELSDLHHPNCKINRKVNS 419


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,615,193
Number of Sequences: 53049
Number of extensions: 531586
Number of successful extensions: 1424
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1419
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)