Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt29f15
         (559 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF267981-1|AAF78954.1| 1548|Homo sapiens putative NADPH oxidase/...    30   6.3  
AF230496-1|AAF73922.1| 1548|Homo sapiens NADPH thyroid oxidase 2...    30   6.3  
AF181972-1|AAF20055.1| 1210|Homo sapiens NADH/NADPH thyroid oxid...    30   6.3  

>AF267981-1|AAF78954.1| 1548|Homo sapiens putative NADPH
            oxidase/peroxidase DUOX2 protein.
          Length = 1548

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = -3

Query: 440  YHRQIKCCAIVIIPKMYEVL*HPQVNLYYILPAVIY 333
            +H  I   A++II   Y ++  P  ++Y+++PA+IY
Sbjct: 1222 HHLYILLYALLIIHGSYALIQLPTFHIYFLVPAIIY 1257


>AF230496-1|AAF73922.1| 1548|Homo sapiens NADPH thyroid oxidase 2
            protein.
          Length = 1548

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = -3

Query: 440  YHRQIKCCAIVIIPKMYEVL*HPQVNLYYILPAVIY 333
            +H  I   A++II   Y ++  P  ++Y+++PA+IY
Sbjct: 1222 HHLYILLYALLIIHGSYALIQLPTFHIYFLVPAIIY 1257


>AF181972-1|AAF20055.1| 1210|Homo sapiens NADH/NADPH thyroid oxidase
           p138-tox protein.
          Length = 1210

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = -3

Query: 440 YHRQIKCCAIVIIPKMYEVL*HPQVNLYYILPAVIY 333
           +H  I   A++II   Y ++  P  ++Y+++PA+IY
Sbjct: 884 HHLYILLYALLIIHGSYALIQLPTFHIYFLVPAIIY 919


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,350,628
Number of Sequences: 237096
Number of extensions: 1554388
Number of successful extensions: 2771
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2767
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)