Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt29f15
         (559 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41029-3|AAF99952.2|  886|Caenorhabditis elegans Hypothetical pr...    28   4.0  
Z81030-1|CAB02703.1| 1204|Caenorhabditis elegans Hypothetical pr...    28   5.2  
U21310-5|AAY86191.1|  148|Caenorhabditis elegans Hypothetical pr...    28   5.2  
U39666-3|AAA80410.2|  178|Caenorhabditis elegans Hypothetical pr...    27   6.9  
Z81054-8|CAB02886.3|  341|Caenorhabditis elegans Hypothetical pr...    27   9.1  

>U41029-3|AAF99952.2|  886|Caenorhabditis elegans Hypothetical
           protein F47G3.1 protein.
          Length = 886

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -3

Query: 191 LTKYATCAQQDNIFVSHTTKHNYRLPLRVNLLFITI 84
           LT  AT A   NI  S T+   + +PL ++LLFI +
Sbjct: 846 LTVDATNAISQNIITSSTSSLIFSIPLPISLLFILL 881


>Z81030-1|CAB02703.1| 1204|Caenorhabditis elegans Hypothetical protein
            C01G10.1 protein.
          Length = 1204

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 14/60 (23%), Positives = 28/60 (46%)
 Frame = -1

Query: 340  LFI*DVVQKSFVNANRKQSQ*FVFLIYQ*LSKSHIAGFDNSRLIYMKKRI*QNMRHVPNK 161
            L I +   +  +N   +  +  + L+Y+ + K  +  FD  R +Y K    ++  +VP K
Sbjct: 917  LLIKNGADRELLNTMNRTPEQMIPLVYKDIPKDKVENFDKIRALYKKANGKKHKMNVPQK 976


>U21310-5|AAY86191.1|  148|Caenorhabditis elegans Hypothetical
           protein F40H6.6 protein.
          Length = 148

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -3

Query: 524 EFYFISYNVQIYMSLLLDLTSKSIKTH 444
           +FYFI Y ++IYM+  L L ++  K +
Sbjct: 120 KFYFIFYKIKIYMNYQLLLMNRKFKIY 146


>U39666-3|AAA80410.2|  178|Caenorhabditis elegans Hypothetical
           protein K04E7.1 protein.
          Length = 178

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +1

Query: 133 FVVWLTKILSCWAHVAYFVK-YVFSY 207
           FVV++T  +  W H+++ VK YV S+
Sbjct: 50  FVVYVTNSICSWLHISFVVKGYVTSF 75


>Z81054-8|CAB02886.3|  341|Caenorhabditis elegans Hypothetical
           protein F01D4.7 protein.
          Length = 341

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -3

Query: 113 LRVNLLFITINTIPLLVVRH 54
           LR+N +FITIN + +L + H
Sbjct: 188 LRINYIFITINVLNVLTLMH 207


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,118,220
Number of Sequences: 27780
Number of extensions: 279873
Number of successful extensions: 711
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)