Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt29f10
         (240 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113517-1|AAM29522.1|  738|Drosophila melanogaster RE59932p pro...    28   2.0  
AE014298-1309|AAF46469.1|  738|Drosophila melanogaster CG12121-P...    28   2.0  
AE014297-4642|AAN14250.1|  480|Drosophila melanogaster CG31021-P...    27   4.6  

>AY113517-1|AAM29522.1|  738|Drosophila melanogaster RE59932p
           protein.
          Length = 738

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 11/44 (25%), Positives = 23/44 (52%)
 Frame = +3

Query: 30  LKCIFWTFTCKDTKFLFFRLHKKFVLPIFLINDSRIYYEASLSF 161
           L  +FW F  K +K   +++H    + +FL + S +++  +  F
Sbjct: 441 LSGLFWVFILKKSKHTVYKIHYLMAVLVFLKSLSLMFHSINYHF 484


>AE014298-1309|AAF46469.1|  738|Drosophila melanogaster CG12121-PA
           protein.
          Length = 738

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 11/44 (25%), Positives = 23/44 (52%)
 Frame = +3

Query: 30  LKCIFWTFTCKDTKFLFFRLHKKFVLPIFLINDSRIYYEASLSF 161
           L  +FW F  K +K   +++H    + +FL + S +++  +  F
Sbjct: 441 LSGLFWVFILKKSKHTVYKIHYLMAVLVFLKSLSLMFHSINYHF 484


>AE014297-4642|AAN14250.1|  480|Drosophila melanogaster CG31021-PA
           protein.
          Length = 480

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 90  HKKFVLPIFLINDSRIYYE 146
           H KF LPI L +  +IYYE
Sbjct: 451 HYKFKLPISLFSHDQIYYE 469


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,822,762
Number of Sequences: 53049
Number of extensions: 168613
Number of successful extensions: 319
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 319
length of database: 24,988,368
effective HSP length: 59
effective length of database: 21,858,477
effective search space used: 437169540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)