Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt29f07
(698 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457362-1|CAG33643.1| 125|Homo sapiens hage colony-stimulating... 139 8e-33
BC005024-1|AAH05024.1| 125|Homo sapiens mitochondria-associated... 139 8e-33
AK026514-1|BAB15494.1| 125|Homo sapiens protein ( Homo sapiens ... 139 8e-33
AF349455-1|AAL57767.1| 125|Homo sapiens mitochondria associated... 139 8e-33
AF151894-1|AAD34131.1| 125|Homo sapiens CGI-136 protein protein. 137 4e-32
BC001593-1|AAH01593.3| 393|Homo sapiens TP53I13 protein protein. 32 2.3
AK075341-1|BAC11555.1| 393|Homo sapiens protein ( Homo sapiens ... 32 2.3
AB110214-1|BAD08208.1| 393|Homo sapiens damage stimulated cytop... 32 2.3
AB110209-1|BAD08203.1| 393|Homo sapiens damage stimulated cytop... 32 2.3
>CR457362-1|CAG33643.1| 125|Homo sapiens hage colony-stimulating
factor signal protein.
Length = 125
Score = 139 bits (337), Expect = 8e-33
Identities = 74/127 (58%), Positives = 88/127 (69%), Gaps = 1/127 (0%)
Frame = +1
Query: 67 MAKYIAQIIVLGAQVVGRAFARALKQEIAASQEXXXXXXXXXXXXXXXXXXXSTGLTLEE 246
MAKY+AQIIV+G QVVGRAFARAL+QE AAS+ +GL+L+E
Sbjct: 1 MAKYLAQIIVMGVQVVGRAFARALRQEFAASRAAADARGRAGHRSAAASNL--SGLSLQE 58
Query: 247 AMQILNIEKVDPEKISKNYEHLFAVNDKSKGGSFYLQSKIVRAKERLDAELK-QTSPNSE 423
A QILN+ K+ PE++ KNYEHLF VNDKS GGSFYLQSK+VRAKERLD ELK Q + E
Sbjct: 59 AQQILNVSKLSPEEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELKIQAQEDRE 118
Query: 424 QGPSKDT 444
+G T
Sbjct: 119 KGQMPHT 125
>BC005024-1|AAH05024.1| 125|Homo sapiens mitochondria-associated
protein involved in granulocyte-macrophage colony-stimu
protein.
Length = 125
Score = 139 bits (337), Expect = 8e-33
Identities = 74/127 (58%), Positives = 88/127 (69%), Gaps = 1/127 (0%)
Frame = +1
Query: 67 MAKYIAQIIVLGAQVVGRAFARALKQEIAASQEXXXXXXXXXXXXXXXXXXXSTGLTLEE 246
MAKY+AQIIV+G QVVGRAFARAL+QE AAS+ +GL+L+E
Sbjct: 1 MAKYLAQIIVMGVQVVGRAFARALRQEFAASRAAADARGRAGHRSAAASNL--SGLSLQE 58
Query: 247 AMQILNIEKVDPEKISKNYEHLFAVNDKSKGGSFYLQSKIVRAKERLDAELK-QTSPNSE 423
A QILN+ K+ PE++ KNYEHLF VNDKS GGSFYLQSK+VRAKERLD ELK Q + E
Sbjct: 59 AQQILNVSKLSPEEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELKIQAQEDRE 118
Query: 424 QGPSKDT 444
+G T
Sbjct: 119 KGQMPHT 125
>AK026514-1|BAB15494.1| 125|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22861 fis, clone KAT01850. ).
Length = 125
Score = 139 bits (337), Expect = 8e-33
Identities = 74/127 (58%), Positives = 88/127 (69%), Gaps = 1/127 (0%)
Frame = +1
Query: 67 MAKYIAQIIVLGAQVVGRAFARALKQEIAASQEXXXXXXXXXXXXXXXXXXXSTGLTLEE 246
MAKY+AQIIV+G QVVGRAFARAL+QE AAS+ +GL+L+E
Sbjct: 1 MAKYLAQIIVMGVQVVGRAFARALRQEFAASRAAADARGRAGHRSAAASNL--SGLSLQE 58
Query: 247 AMQILNIEKVDPEKISKNYEHLFAVNDKSKGGSFYLQSKIVRAKERLDAELK-QTSPNSE 423
A QILN+ K+ PE++ KNYEHLF VNDKS GGSFYLQSK+VRAKERLD ELK Q + E
Sbjct: 59 AQQILNVSKLSPEEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELKIQAQEDRE 118
Query: 424 QGPSKDT 444
+G T
Sbjct: 119 KGQMPHT 125
>AF349455-1|AAL57767.1| 125|Homo sapiens mitochondria associated
granulocyte macrophage CSF signaling molecule Magmas
protein.
Length = 125
Score = 139 bits (337), Expect = 8e-33
Identities = 74/127 (58%), Positives = 88/127 (69%), Gaps = 1/127 (0%)
Frame = +1
Query: 67 MAKYIAQIIVLGAQVVGRAFARALKQEIAASQEXXXXXXXXXXXXXXXXXXXSTGLTLEE 246
MAKY+AQIIV+G QVVGRAFARAL+QE AAS+ +GL+L+E
Sbjct: 1 MAKYLAQIIVMGVQVVGRAFARALRQEFAASRAAADARGRAGHRSAAASNL--SGLSLQE 58
Query: 247 AMQILNIEKVDPEKISKNYEHLFAVNDKSKGGSFYLQSKIVRAKERLDAELK-QTSPNSE 423
A QILN+ K+ PE++ KNYEHLF VNDKS GGSFYLQSK+VRAKERLD ELK Q + E
Sbjct: 59 AQQILNVSKLSPEEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELKIQAQEDRE 118
Query: 424 QGPSKDT 444
+G T
Sbjct: 119 KGQMPHT 125
>AF151894-1|AAD34131.1| 125|Homo sapiens CGI-136 protein protein.
Length = 125
Score = 137 bits (331), Expect = 4e-32
Identities = 70/112 (62%), Positives = 82/112 (73%)
Frame = +1
Query: 67 MAKYIAQIIVLGAQVVGRAFARALKQEIAASQEXXXXXXXXXXXXXXXXXXXSTGLTLEE 246
MAKY+AQIIV+G QVVGRAFARAL+QE AAS+ +GL+L+E
Sbjct: 1 MAKYLAQIIVMGVQVVGRAFARALRQEFAASRAAADARGRAGHRSAAASNL--SGLSLQE 58
Query: 247 AMQILNIEKVDPEKISKNYEHLFAVNDKSKGGSFYLQSKIVRAKERLDAELK 402
A QILN+ K+ PE++ KNYEHLF VNDKS GGSFYLQSK+VRAKERLD ELK
Sbjct: 59 AQQILNVSKLSPEEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELK 110
>BC001593-1|AAH01593.3| 393|Homo sapiens TP53I13 protein protein.
Length = 393
Score = 31.9 bits (69), Expect = 2.3
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1
Query: 254 CIASSKVNPVEALAAALRAPSGPPPALFAASWDAAISCF 138
C+ SS+ +P AA RA GP P A+W A F
Sbjct: 281 CVCSSQASPAPRAAAPPRAARGPTPRTEEAAWAAMALTF 319
>AK075341-1|BAC11555.1| 393|Homo sapiens protein ( Homo sapiens
cDNA PSEC0020 fis, clone NT2RP1000255. ).
Length = 393
Score = 31.9 bits (69), Expect = 2.3
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1
Query: 254 CIASSKVNPVEALAAALRAPSGPPPALFAASWDAAISCF 138
C+ SS+ +P AA RA GP P A+W A F
Sbjct: 281 CVCSSQASPAPRAAAPPRAARGPTPRTEEAAWAAMALTF 319
>AB110214-1|BAD08208.1| 393|Homo sapiens damage stimulated
cytoplasmic protein1 protein.
Length = 393
Score = 31.9 bits (69), Expect = 2.3
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1
Query: 254 CIASSKVNPVEALAAALRAPSGPPPALFAASWDAAISCF 138
C+ SS+ +P AA RA GP P A+W A F
Sbjct: 281 CVCSSQASPAPRAAAPPRAARGPTPRTEEAAWAAMALTF 319
>AB110209-1|BAD08203.1| 393|Homo sapiens damage stimulated
cytoplasmic protein1 protein.
Length = 393
Score = 31.9 bits (69), Expect = 2.3
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1
Query: 254 CIASSKVNPVEALAAALRAPSGPPPALFAASWDAAISCF 138
C+ SS+ +P AA RA GP P A+W A F
Sbjct: 281 CVCSSQASPAPRAAAPPRAARGPTPRTEEAAWAAMALTF 319
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,818,000
Number of Sequences: 237096
Number of extensions: 1723381
Number of successful extensions: 8508
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8503
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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