Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt29f04
(751 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 27 0.47
AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein pr... 26 1.1
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 26 1.4
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ... 25 3.3
U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. 24 4.4
U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. 24 4.4
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 24 4.4
Y17688-1|CAA76813.1| 153|Anopheles gambiae gSG1 protein protein. 24 5.8
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 24 5.8
AJ130949-1|CAA10258.1| 401|Anopheles gambiae SG1 protein protein. 24 5.8
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 27.5 bits (58), Expect = 0.47
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 572 QVFGGISPLRTLSLFMDMSPFRQACIHAVTGTDAAKDLHEACDLGRGMAA 721
++ GG L LSL + M ++ A ++ + DAA DL ++G + A
Sbjct: 1082 ELSGGQRSLVALSLILAMLKYKPAPLYILDEVDAALDLSHTQNIGNMLKA 1131
>AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein
protein.
Length = 476
Score = 26.2 bits (55), Expect = 1.1
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +3
Query: 504 HRCKRPNTPITSCTMHPSPPPANRSSGEYRRSGPCHCS 617
HRC++P C M + P + + +Y R +CS
Sbjct: 205 HRCRKPGHMKRDCPMESNNTPTSTTMRDYSRKNE-NCS 241
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 25.8 bits (54), Expect = 1.4
Identities = 17/60 (28%), Positives = 24/60 (40%)
Frame = +3
Query: 495 AAVHRCKRPNTPITSCTMHPSPPPANRSSGEYRRSGPCHCSWTCRLSDKRVFTPSPAQTP 674
+ V+ R TP T+ T SP PA + + P SW + T +P TP
Sbjct: 660 SVVYPIYRRTTPTTTTTTTASPAPAPAIRSRFGDNRP---SWRPLIVPHATTTKTPTTTP 716
>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
protein.
Length = 1087
Score = 24.6 bits (51), Expect = 3.3
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 627 RLSDKRVFTPSPAQTPLKIC 686
++ DKR F PA+T L+IC
Sbjct: 883 KVKDKREFEFDPARTVLEIC 902
>U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 24.2 bits (50), Expect = 4.4
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = +3
Query: 363 TASTWVNFAVFSE----TVTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTP 530
T++T V A S T TTS T TSG S R SV + P + + P
Sbjct: 26 TSTTTVTMATASPVPACTTTTSTTSTSGASAASSPTRDEMSVVVPISPLHIKQ-----EP 80
Query: 531 ITSCTMHPSPPP 566
+ S P+ PP
Sbjct: 81 LGSDGPMPAQPP 92
>U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 24.2 bits (50), Expect = 4.4
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = +3
Query: 363 TASTWVNFAVFSE----TVTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTP 530
T++T V A S T TTS T TSG S R SV + P + + P
Sbjct: 26 TSTTTVTMATASPVPACTTTTSTTSTSGASAASSPTRDEMSVVVPISPLHIKQ-----EP 80
Query: 531 ITSCTMHPSPPP 566
+ S P+ PP
Sbjct: 81 LGSDGPMPAQPP 92
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 24.2 bits (50), Expect = 4.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 525 TPITSCTMHPSPPPANRSS 581
T S + HPSP PA R+S
Sbjct: 734 TSSKSASTHPSPHPATRAS 752
>Y17688-1|CAA76813.1| 153|Anopheles gambiae gSG1 protein protein.
Length = 153
Score = 23.8 bits (49), Expect = 5.8
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 559 GEGCIVQLVMGVFGRL 512
GE C++QLV G+ RL
Sbjct: 18 GEQCVIQLVRGMVTRL 33
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.8 bits (49), Expect = 5.8
Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 3/67 (4%)
Frame = +3
Query: 372 TWVNFAVFSETVTTSLTMTSGYLMERSALRKAS-SVTRTVW--PAAVHRCKRPNTPITSC 542
T V++++ T+ T S S L + T TVW P A P T T
Sbjct: 182 TTTTTTVWTDSTATTTTPASTTTTTWSDLPPPPPTTTTTVWIDPTATTTTHAPTTTTTWS 241
Query: 543 TMHPSPP 563
+ P PP
Sbjct: 242 DLPPPPP 248
>AJ130949-1|CAA10258.1| 401|Anopheles gambiae SG1 protein protein.
Length = 401
Score = 23.8 bits (49), Expect = 5.8
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 559 GEGCIVQLVMGVFGRL 512
GE C++QLV G+ RL
Sbjct: 18 GEQCVIQLVRGMVTRL 33
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 833,445
Number of Sequences: 2352
Number of extensions: 19138
Number of successful extensions: 50
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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