Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt29e17
         (807 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1890|AAF58250.1|  504|Drosophila melanogaster CG8422-PA...    33   0.61 
BT003212-1|AAO24967.1|  527|Drosophila melanogaster RE18250p pro...    31   2.5  
AE014297-3631|AAF56340.1|  527|Drosophila melanogaster CG5807-PA...    31   2.5  
AF132157-1|AAD34745.1|  527|Drosophila melanogaster unknown prot...    30   3.2  

>AE013599-1890|AAF58250.1|  504|Drosophila melanogaster CG8422-PA
           protein.
          Length = 504

 Score = 32.7 bits (71), Expect = 0.61
 Identities = 18/62 (29%), Positives = 34/62 (54%)
 Frame = -1

Query: 513 FKEIHFMRL*NEILLFFCFVLISLFVYQNTLIKLTNRNLISSTFSL*KLFHFET*NLFIF 334
           FKE+  +R      LFF +++ +LF      ++++ R+ + S  +L  LFHF T   F +
Sbjct: 154 FKELRCLRNTIHANLFFTYIMSALFWILLLSVQISIRSGVGSCIALITLFHFFTLTNFFW 213

Query: 333 LI 328
           ++
Sbjct: 214 ML 215


>BT003212-1|AAO24967.1|  527|Drosophila melanogaster RE18250p
           protein.
          Length = 527

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
 Frame = -1

Query: 477 ILLFFCFVLISLFVYQNTL--------IKLTNRNLISSTFSL*KLFHFET*NLFIFLIKF 322
           +LL FC  +  L V QNTL        + L+ R       SL KL  F    L + LI F
Sbjct: 349 LLLLFCTAVTILLVVQNTLELLIGIKALPLSTRQFALGISSLSKLGPFGA-GLEVCLI-F 406

Query: 321 YIGA*AKC*NLYYLNFI*NICKKR 250
           Y+GA       Y + F+  +C KR
Sbjct: 407 YLGA-TSVVGFYSMPFMRKVCPKR 429


>AE014297-3631|AAF56340.1|  527|Drosophila melanogaster CG5807-PA
           protein.
          Length = 527

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
 Frame = -1

Query: 477 ILLFFCFVLISLFVYQNTL--------IKLTNRNLISSTFSL*KLFHFET*NLFIFLIKF 322
           +LL FC  +  L V QNTL        + L+ R       SL KL  F    L + LI F
Sbjct: 349 LLLLFCTAVTILLVVQNTLELLIGIKALPLSTRQFALGISSLSKLGPFGA-GLEVCLI-F 406

Query: 321 YIGA*AKC*NLYYLNFI*NICKKR 250
           Y+GA       Y + F+  +C KR
Sbjct: 407 YLGA-TSVVGFYSMPFMRKVCPKR 429


>AF132157-1|AAD34745.1|  527|Drosophila melanogaster unknown
           protein.
          Length = 527

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
 Frame = -1

Query: 477 ILLFFCFVLISLFVYQNTL--------IKLTNRNLISSTFSL*KLFHFET*NLFIFLIKF 322
           +LL FC  +  L V QNTL        + L+ R       SL KL  F    L + LI F
Sbjct: 349 LLLLFCTAVTILLVVQNTLELLIGIKALPLSTRQFALGISSLSKLGPFGA-GLEVRLI-F 406

Query: 321 YIGA*AKC*NLYYLNFI*NICKKR 250
           Y+GA       Y + F+  +C KR
Sbjct: 407 YLGA-TSVVGFYSMPFMRKVCPKR 429


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,042,344
Number of Sequences: 53049
Number of extensions: 537225
Number of successful extensions: 1032
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1032
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3777934368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)