Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt29e16
         (772 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    27   0.64 
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   6.0  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   6.0  
AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase...    24   6.0  

>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 27.1 bits (57), Expect = 0.64
 Identities = 13/55 (23%), Positives = 22/55 (40%)
 Frame = +1

Query: 352 YGWESEAAVEKAREQVANLINAEPKEIIFTSGATESNNISVKGVGRFYAPRKKHV 516
           + W     +E+    +  L +  PKE+          N ++KGV   Y P +  V
Sbjct: 126 FDWNDYHTLEEIHAWLDQLASEHPKEVELLDAGRSHQNRTMKGVKLSYGPGRPGV 180


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 109  VVCKSAIKQKTQLNGNGVVIFEQSNF 186
            V CK  +     LN +G V+F  + F
Sbjct: 1487 VACKRLVSMNMPLNSDGTVLFNATLF 1512


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 622 NLKDLEDAITPETSLVSIMTVNNEI 696
           NLK +++A TP TS ++   V N +
Sbjct: 917 NLKFIDEASTPSTSAMAATIVPNPV 941


>AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase
           subunit 2 protein.
          Length = 686

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 274 MDPRVLDVMLPYLVSYHGNPHS 339
           M+P  L V   +  +YHGN H+
Sbjct: 348 MEPSALSVNSQFYGNYHGNLHN 369


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 816,105
Number of Sequences: 2352
Number of extensions: 17504
Number of successful extensions: 64
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)