Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt29e09
         (759 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40413-2|AAK39174.1|  296|Caenorhabditis elegans Hypothetical pr...   149   3e-36
Z47808-4|CAA87772.1|  235|Caenorhabditis elegans Hypothetical pr...   132   3e-31
AF100305-5|AAN65285.1|  353|Caenorhabditis elegans Hypothetical ...    31   0.89 
AF100305-4|AAC68916.2|  426|Caenorhabditis elegans Hypothetical ...    31   0.89 
AF100305-3|AAL65795.1|  426|Caenorhabditis elegans Hypothetical ...    31   0.89 
U88183-3|AAB52656.2|  593|Caenorhabditis elegans Warthog (hedgeh...    29   4.7  
AL110490-4|CAB54450.1|  474|Caenorhabditis elegans Hypothetical ...    29   4.7  
Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical pr...    28   6.3  
U70855-5|AAB09160.2|  886|Caenorhabditis elegans Hypothetical pr...    28   6.3  
U55857-10|AAA98035.2|  895|Caenorhabditis elegans Hypothetical p...    28   6.3  
AC024136-3|AAF35959.2|  470|Caenorhabditis elegans Hypothetical ...    28   6.3  
Z46791-1|CAA86761.1|  476|Caenorhabditis elegans Hypothetical pr...    28   8.3  
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr...    28   8.3  
AF098501-3|AAM69106.1|  275|Caenorhabditis elegans Hypothetical ...    28   8.3  
AF098501-2|AAM69105.1|  298|Caenorhabditis elegans Hypothetical ...    28   8.3  
AF098501-1|AAC67404.2|  548|Caenorhabditis elegans Hypothetical ...    28   8.3  

>U40413-2|AAK39174.1|  296|Caenorhabditis elegans Hypothetical
           protein C18B2.4 protein.
          Length = 296

 Score =  149 bits (360), Expect = 3e-36
 Identities = 75/202 (37%), Positives = 116/202 (57%), Gaps = 5/202 (2%)
 Frame = +1

Query: 115 MSLNTAHAD--HGVLIHAGECIILFSDNVSVEFYGNDTPEFKGIKEGRMYLTTHRMIYNS 288
           MSLNT+H     G+LI+ GE I+L++ NV ++F   + P FK  K G +YLT+HR+I+ +
Sbjct: 1   MSLNTSHTPDGQGILIYNGEMILLYTTNVKLKFEKYNVPAFKSTKSGALYLTSHRIIFMN 60

Query: 289 KKNTDAMRSFSFPFIALQDVTVEQPMFSANCIKGKVRAQPNGNFIGEVKFKLTFKSGGAI 468
           +   D  +SF+ PF +++DV +EQP+ + N +KG V+  P GNF G  +++L+F  GG I
Sbjct: 61  ESKKDEFKSFAMPFNSVRDVKLEQPLLTPNYLKGWVQPMPGGNFDGCPEWRLSFPKGGCI 120

Query: 469 EYGQAMLKAAHLASR---HMAAGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPYSA 639
           E+G+A+L+AA +ASR     A  A                                P + 
Sbjct: 121 EFGEALLRAADMASRARPFAAPPAYGGNMQQQSGTTYYAAPPTYYLVQGTYQGFQAPTNV 180

Query: 640 FPDQPPPNSVFVSNTPPPYPGV 705
           FP++PP  +V+V + PPPYPG+
Sbjct: 181 FPERPPAQNVYVYDMPPPYPGI 202


>Z47808-4|CAA87772.1|  235|Caenorhabditis elegans Hypothetical
           protein D2013.6 protein.
          Length = 235

 Score =  132 bits (318), Expect = 3e-31
 Identities = 70/199 (35%), Positives = 105/199 (52%), Gaps = 2/199 (1%)
 Frame = +1

Query: 115 MSLNTAHADHG--VLIHAGECIILFSDNVSVEFYGNDTPEFKGIKEGRMYLTTHRMIYNS 288
           MS+NTA+   G  VL++ GE I++F+  V +    ++    +G + G +YLT+HR+I+  
Sbjct: 1   MSINTANTPDGLGVLLYNGETIVIFAQGVVMTLGTSENENLEGRRTGTIYLTSHRIIFMP 60

Query: 289 KKNTDAMRSFSFPFIALQDVTVEQPMFSANCIKGKVRAQPNGNFIGEVKFKLTFKSGGAI 468
               D ++SF  PF ++QDV + QP+F AN + G   A   G   GEVK+++TF  GG I
Sbjct: 61  DPG-DWLKSFEIPFNSMQDVNLNQPIFGANYLCGIASAVQGGQMRGEVKWRMTFNRGGCI 119

Query: 469 EYGQAMLKAAHLASRHMAAGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPYSAFPD 648
           E+GQ++L+A   A R     A                               P   +FPD
Sbjct: 120 EFGQSLLQAVERAVRMRPENAPPAYSPPIGDFYSAPPAYYQPSPDQGPNGFNPTTDSFPD 179

Query: 649 QPPPNSVFVSNTPPPYPGV 705
           QP P+ VF+S+ PPPYPG+
Sbjct: 180 QPNPSRVFMSSAPPPYPGI 198


>AF100305-5|AAN65285.1|  353|Caenorhabditis elegans Hypothetical
           protein W04B5.3c protein.
          Length = 353

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +1

Query: 628 PYSAFPDQPPPNSVFVSNTPPPYPGVT-GASYP 723
           PY++ P   PP+SV +S TP P P V    +YP
Sbjct: 272 PYTSVPMPQPPSSVPLSYTPAPTPSVPYTVTYP 304


>AF100305-4|AAC68916.2|  426|Caenorhabditis elegans Hypothetical
           protein W04B5.3a protein.
          Length = 426

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +1

Query: 628 PYSAFPDQPPPNSVFVSNTPPPYPGVT-GASYP 723
           PY++ P   PP+SV +S TP P P V    +YP
Sbjct: 272 PYTSVPMPQPPSSVPLSYTPAPTPSVPYTVTYP 304


>AF100305-3|AAL65795.1|  426|Caenorhabditis elegans Hypothetical
           protein W04B5.3b protein.
          Length = 426

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +1

Query: 628 PYSAFPDQPPPNSVFVSNTPPPYPGVT-GASYP 723
           PY++ P   PP+SV +S TP P P V    +YP
Sbjct: 272 PYTSVPMPQPPSSVPLSYTPAPTPSVPYTVTYP 304


>U88183-3|AAB52656.2|  593|Caenorhabditis elegans Warthog
           (hedgehog-like family)protein 6 protein.
          Length = 593

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 643 PDQPPPNSVFVSNTPPPYPGVTGASYP 723
           P  PPP+S ++ N  P  P V   +YP
Sbjct: 283 PLPPPPSSNYIDNVAPASPVVQSPAYP 309


>AL110490-4|CAB54450.1|  474|Caenorhabditis elegans Hypothetical
           protein Y48B6A.4 protein.
          Length = 474

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = -3

Query: 553 VGYKEVAKHQLPYDEKQDEQLLTW 482
           +GY +V K +L  DE+++E++L W
Sbjct: 408 IGYLKVFKAKLDDDEEEEEEILNW 431


>Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical protein
            T08G11.1b protein.
          Length = 3185

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +1

Query: 652  PPPNSVFVSNTPPPY 696
            PPP SV V NTP P+
Sbjct: 2680 PPPKSVIVDNTPKPF 2694


>Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical protein
            T08G11.1a protein.
          Length = 3212

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +1

Query: 652  PPPNSVFVSNTPPPY 696
            PPP SV V NTP P+
Sbjct: 2707 PPPKSVIVDNTPKPF 2721


>U70855-5|AAB09160.2|  886|Caenorhabditis elegans Hypothetical
           protein K08F11.2 protein.
          Length = 886

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
 Frame = +1

Query: 178 LFSDNVSVEFYGNDTPEFKGIKEG----RMYLTTHRMIYNS-KKNTDAMRSFS 321
           L+S + SV  + N+TP  KGI+E     RM L     I +S  +N DA+ S S
Sbjct: 129 LYSSSDSVGVFSNETPYVKGIREDLSRERMRLLEVDSILDSISENLDAILSSS 181


>U55857-10|AAA98035.2|  895|Caenorhabditis elegans Hypothetical
           protein K08D10.1 protein.
          Length = 895

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
 Frame = +1

Query: 178 LFSDNVSVEFYGNDTPEFKGIKEG----RMYLTTHRMIYNS-KKNTDAMRSFS 321
           L+S + SV  + N+TP  KGI+E     RM L     I +S  +N DA+ S S
Sbjct: 129 LYSSSDSVGVFSNETPYVKGIREDLSRERMRLLEVDSILDSISENLDAILSSS 181


>AC024136-3|AAF35959.2|  470|Caenorhabditis elegans Hypothetical
           protein F54A3.6 protein.
          Length = 470

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 643 PDQPPPNSVFVSNTPPPYPGVTGASYP 723
           P+ PPP++ +    PPP P  + ++ P
Sbjct: 322 PNPPPPSAGYFFQAPPPAPASSSSTVP 348


>Z46791-1|CAA86761.1|  476|Caenorhabditis elegans Hypothetical
           protein C09G5.2 protein.
          Length = 476

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +1

Query: 109 CIMSLNTAHADHGVLIHAGE-CIILFSDNVSVEFYGNDTPEF 231
           C+  +  AHAD   L+H GE C    +D + V++     P F
Sbjct: 102 CVDEVAAAHADCTALVHFGEACHSAPTDKIDVKYVLGSMPIF 143


>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
           protein C01G8.9a protein.
          Length = 1724

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = +1

Query: 625 PPYSAFPDQPPPNSVFVSNTPPPYPGVTGASYP 723
           PP    P Q PP        P PYPG  G   P
Sbjct: 707 PPQPQQPPQGPPGPPGPQQHPGPYPGYPGYGPP 739


>AF098501-3|AAM69106.1|  275|Caenorhabditis elegans Hypothetical
           protein H28G03.2c protein.
          Length = 275

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +1

Query: 625 PPYSAFPDQPPPNSVFVSNTPPPYPGVTGASYP 723
           PP+S  P  PPP S   +   PP P  + A  P
Sbjct: 130 PPFSVPPSVPPPTSSAAAPIVPPPPVQSTAQPP 162


>AF098501-2|AAM69105.1|  298|Caenorhabditis elegans Hypothetical
           protein H28G03.2b protein.
          Length = 298

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +1

Query: 625 PPYSAFPDQPPPNSVFVSNTPPPYPGVTGASYP 723
           PP+S  P  PPP S   +   PP P  + A  P
Sbjct: 153 PPFSVPPSVPPPTSSAAAPIVPPPPVQSTAQPP 185


>AF098501-1|AAC67404.2|  548|Caenorhabditis elegans Hypothetical
           protein H28G03.2a protein.
          Length = 548

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +1

Query: 625 PPYSAFPDQPPPNSVFVSNTPPPYPGVTGASYP 723
           PP+S  P  PPP S   +   PP P  + A  P
Sbjct: 403 PPFSVPPSVPPPTSSAAAPIVPPPPVQSTAQPP 435


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,563,991
Number of Sequences: 27780
Number of extensions: 342548
Number of successful extensions: 1162
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1153
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)