Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt29e07
         (132 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    19   4.1  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    19   5.5  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    19   7.2  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    18   9.6  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 113 VYKFILLKSFGVSNFN 66
           ++  I  KSF + NFN
Sbjct: 135 IFLLIRFKSFSLLNFN 150


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 7/15 (46%), Positives = 7/15 (46%)
 Frame = -3

Query: 70  LINKNLCQKKNGNNN 26
           LI    C K N  NN
Sbjct: 411 LIKNTRCAKSNNQNN 425


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 118 YRYINLFY*KVLGLVTLINKNLC 50
           YR+I LFY +     +  +K LC
Sbjct: 8   YRHILLFYFRKGKNASQAHKKLC 30


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -3

Query: 103 LFY*KVLGLVTLINKNLC 50
           +FY  ++  +T +NK  C
Sbjct: 25  IFYGSIMFSMTQVNKEEC 42


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,211
Number of Sequences: 438
Number of extensions: 457
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 24
effective length of database: 135,831
effective search space used:  2580789
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)