Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt29d15
(816 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces po... 29 0.79
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 27 3.2
SPBC1685.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 3.2
SPCC18B5.11c |cds1||replication checkpoint kinase Cds1|Schizosac... 26 5.6
SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schi... 26 7.4
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch... 26 7.4
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 26 7.4
SPBC3D6.10 |apn2||AP-endonuclease Apn2|Schizosaccharomyces pombe... 26 7.4
SPAC12G12.01c ||SPAC630.02|ubiquitin-protein ligase E3|Schizosac... 26 7.4
SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||M... 25 9.7
SPAC890.06 |||nucleoporin Nup157/170|Schizosaccharomyces pombe|c... 25 9.7
>SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 471
Score = 29.1 bits (62), Expect = 0.79
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 222 LVDLQQSLGA-SECIQNSVPICYGCYLDGVNDYIVLEDLGESRCKSLTK 365
+ D++Q + S C ++V YGC++DG +I++E + L K
Sbjct: 49 ITDIEQEVFMLSNCNSSNVIQYYGCFVDGYTLWILMEHMDGGSVSGLLK 97
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 359 NETPYKVRTGFSSRDTSTFARSIDDFAN 442
++ P K GF +TSTF + DDF++
Sbjct: 375 SDLPNKTAFGFMRSNTSTFNQKCDDFSS 402
>SPBC1685.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 325
Score = 27.1 bits (57), Expect = 3.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -1
Query: 627 LDRAARYIFYSKQTMDLRVQLKSLDLSLQLCVEISNTNHDFFQ 499
LD A +F SKQ DL K++ LQL + N D ++
Sbjct: 60 LDELAEVLFQSKQPNDLTRIRKAIAEQLQLWCQACQENADLYR 102
>SPCC18B5.11c |cds1||replication checkpoint kinase
Cds1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 26.2 bits (55), Expect = 5.6
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 294 YLDG--VNDYIVLE-DLGESRCKSLTKHPTKCERDSVLETLAHLHAVSMTLRIKKPD 455
Y++G + D+++ + E CK L K +LETL HLH +T R KP+
Sbjct: 250 YVEGGDLMDFLIANGSIDEQDCKPLLKQ--------LLETLLHLHKQGVTHRDIKPE 298
>SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase
Ogm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 893
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +3
Query: 294 YLDGVNDYIVLEDLGESRCKSLTKHPTKCERDS 392
YLD ++DY D GE+ + HP D+
Sbjct: 717 YLDNLSDYKFSSDAGETYFEKAAPHPFVYSEDT 749
>SPBP19A11.04c |mor2|cps12|morphogenesis protein
Mor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2196
Score = 25.8 bits (54), Expect = 7.4
Identities = 17/71 (23%), Positives = 30/71 (42%)
Frame = +3
Query: 456 EFKRIADLIPEAYYTEKNRDWYSKFQHKAVMIDQAILIEHEDPSSVYYKKYNELLGQDVY 635
E + D I A ++N++W S MI++ + +HE + YY G +
Sbjct: 2125 EHRLSLDEIRGAAELKQNKNWNSMLDQSVSMINEDSVEDHETHEN-YYHLRTMFQGSESN 2183
Query: 636 GCLIEMTTTRG 668
+ T +RG
Sbjct: 2184 ESFTDTTRSRG 2194
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 54 GEGLLSAVYRIKVTGKRYSTSFIGKGFVDNERIKNSLNCAEL 179
G L + IK+ G + SF+ +GF+ N+ I +NC ++
Sbjct: 188 GSTNLDNIQIIKILGGKLDDSFLDEGFILNKTI--GVNCPKV 227
>SPBC3D6.10 |apn2||AP-endonuclease Apn2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 523
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 693 DSWTPNFLRSKGRTVAIDFQM 755
D T N++ S+GR + +DFQM
Sbjct: 124 DRKTANWIDSEGRCILLDFQM 144
>SPAC12G12.01c ||SPAC630.02|ubiquitin-protein ligase
E3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 905
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/53 (24%), Positives = 23/53 (43%)
Frame = +3
Query: 492 YYTEKNRDWYSKFQHKAVMIDQAILIEHEDPSSVYYKKYNELLGQDVYGCLIE 650
+ E + D S K + + I ED + YN +LG D+ G +++
Sbjct: 367 FVDENSFDSSSSCSSKVFLTTRNNSINSEDSAHEVLLSYNRVLGSDIQGTILD 419
>SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1317
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -3
Query: 121 IKDVEYLLPVTLIL*TALRRPSPFG 47
I+D+E+ +PVTL + + R P+G
Sbjct: 1202 IRDIEFRIPVTLSILSERRAYHPYG 1226
>SPAC890.06 |||nucleoporin Nup157/170|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1315
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 99 KRYSTSFIGKGFVDNERIKNSLNCAEL 179
K+Y F GK F+D R N + + L
Sbjct: 594 KKYYIEFGGKAFIDQSRYNNQYDSSSL 620
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,167,980
Number of Sequences: 5004
Number of extensions: 63759
Number of successful extensions: 182
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 398435810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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