Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt29d15
         (816 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   2.1  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    25   2.8  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    24   4.9  

>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 3    DSDEDIENIELTKAAPNGEGLLSAVYRIKV 92
            D D+D+EN + T AA   E   +A    +V
Sbjct: 1126 DDDDDVENRQATNAASTSEAARTAAEESRV 1155


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 707 RSPRVSVIDHSEISTSRRHFDQAPVHVLTEQL 612
           R+P   + DH+EI    R F + PV  L  +L
Sbjct: 55  RAPVFLIDDHAEIVIRLREFPETPVGTLIYRL 86


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 486  EAYYTEKNRDWYSKFQHKAVMIDQAILIEHED 581
            +A   EK  DW +  QH +   D+   + H+D
Sbjct: 943  DAAMVEKALDWLASKQHSSGRFDETGKVWHKD 974


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 799,478
Number of Sequences: 2352
Number of extensions: 16104
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)