Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt29d13
         (810 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450 CY...    24   6.4  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   8.4  

>AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450
           CYP6S2 protein.
          Length = 504

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
 Frame = +2

Query: 422 ILNKNSADVKDCTIYVGLFPCNECAKMIIQSGIKKVVYLSDKNAHRPEYIASKKMFN--A 595
           ++ K    +KD   YVGLF   +   +++     + V + D N      + S + F+  +
Sbjct: 57  LIQKLYRQLKDRGDYVGLFFFRDPVLLVLSPEFARTVMVKDFNYFVDRGVYSNEEFDPLS 116

Query: 596 SNIIYKQ---YKPRRSKIEINF 652
           +N+ + +   ++  RSK+   F
Sbjct: 117 ANLFFMEGAKWRKLRSKLTPTF 138


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 12/58 (20%), Positives = 27/58 (46%)
 Frame = +2

Query: 506  IQSGIKKVVYLSDKNAHRPEYIASKKMFNASNIIYKQYKPRRSKIEINFDIDWDLVSP 679
            + S +  +VY+ D N + P+++  +   N +    +   P   +I +   +D D + P
Sbjct: 1368 LSSTVDLIVYVRDVNDNLPQFLLKEISLNFT----EHMTPGTERIRLPDTVDQDYLDP 1421


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 840,061
Number of Sequences: 2352
Number of extensions: 18825
Number of successful extensions: 31
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)