Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt29d13
         (810 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011479-1|AAR99137.1|  203|Drosophila melanogaster RE06943p pro...   196   2e-50
AE014296-3307|AAN11625.1|  203|Drosophila melanogaster CG6951-PB...   196   2e-50
AE014296-3306|AAF49046.1|  203|Drosophila melanogaster CG6951-PA...   196   2e-50
AY094910-1|AAM11263.1|  420|Drosophila melanogaster RH14937p pro...    29   9.9  
AE014297-4561|AAF57022.2|  420|Drosophila melanogaster CG9743-PA...    29   9.9  

>BT011479-1|AAR99137.1|  203|Drosophila melanogaster RE06943p
           protein.
          Length = 203

 Score =  196 bits (479), Expect = 2e-50
 Identities = 91/173 (52%), Positives = 118/173 (68%), Gaps = 5/173 (2%)
 Frame = +2

Query: 152 LHEEQTAKKRNDYIDWQEYFMAVAFLAAKRSKDPKTQVGACIVNNDNKIVGIGYNGMPIG 331
           L +   + KR +Y+ W +YFMA + L+AKRSKDP TQVGACIV++ N+IV IGYNG P  
Sbjct: 13  LSKSPESHKRKEYLHWDDYFMATSLLSAKRSKDPVTQVGACIVDSQNRIVAIGYNGFPRN 72

Query: 332 CNDDDFPWGKNTPS-----PLDSKYLYVCHAEMNAILNKNSADVKDCTIYVGLFPCNECA 496
           C+DD FPW K         PL+ K +YV HAE NAILN N   +    +Y  LFPCNECA
Sbjct: 73  CSDDVFPWSKAKKGSQEFDPLEDKKMYVVHAEANAILNSNGMSLSGTRLYTTLFPCNECA 132

Query: 497 KMIIQSGIKKVVYLSDKNAHRPEYIASKKMFNASNIIYKQYKPRRSKIEINFD 655
           K+IIQ GI +V+YLSDK A +P Y ASK+M +A  + YK++ P++  I I+FD
Sbjct: 133 KLIIQVGISQVLYLSDKYADKPTYRASKRMLDAVGVEYKRHIPQKKTITIDFD 185


>AE014296-3307|AAN11625.1|  203|Drosophila melanogaster CG6951-PB,
           isoform B protein.
          Length = 203

 Score =  196 bits (479), Expect = 2e-50
 Identities = 91/173 (52%), Positives = 118/173 (68%), Gaps = 5/173 (2%)
 Frame = +2

Query: 152 LHEEQTAKKRNDYIDWQEYFMAVAFLAAKRSKDPKTQVGACIVNNDNKIVGIGYNGMPIG 331
           L +   + KR +Y+ W +YFMA + L+AKRSKDP TQVGACIV++ N+IV IGYNG P  
Sbjct: 13  LSKSPESHKRKEYLHWDDYFMATSLLSAKRSKDPVTQVGACIVDSQNRIVAIGYNGFPRN 72

Query: 332 CNDDDFPWGKNTPS-----PLDSKYLYVCHAEMNAILNKNSADVKDCTIYVGLFPCNECA 496
           C+DD FPW K         PL+ K +YV HAE NAILN N   +    +Y  LFPCNECA
Sbjct: 73  CSDDVFPWSKAKKGSQEFDPLEDKKMYVVHAEANAILNSNGMSLSGTRLYTTLFPCNECA 132

Query: 497 KMIIQSGIKKVVYLSDKNAHRPEYIASKKMFNASNIIYKQYKPRRSKIEINFD 655
           K+IIQ GI +V+YLSDK A +P Y ASK+M +A  + YK++ P++  I I+FD
Sbjct: 133 KLIIQVGISQVLYLSDKYADKPTYRASKRMLDAVGVEYKRHIPQKKTITIDFD 185


>AE014296-3306|AAF49046.1|  203|Drosophila melanogaster CG6951-PA,
           isoform A protein.
          Length = 203

 Score =  196 bits (479), Expect = 2e-50
 Identities = 91/173 (52%), Positives = 118/173 (68%), Gaps = 5/173 (2%)
 Frame = +2

Query: 152 LHEEQTAKKRNDYIDWQEYFMAVAFLAAKRSKDPKTQVGACIVNNDNKIVGIGYNGMPIG 331
           L +   + KR +Y+ W +YFMA + L+AKRSKDP TQVGACIV++ N+IV IGYNG P  
Sbjct: 13  LSKSPESHKRKEYLHWDDYFMATSLLSAKRSKDPVTQVGACIVDSQNRIVAIGYNGFPRN 72

Query: 332 CNDDDFPWGKNTPS-----PLDSKYLYVCHAEMNAILNKNSADVKDCTIYVGLFPCNECA 496
           C+DD FPW K         PL+ K +YV HAE NAILN N   +    +Y  LFPCNECA
Sbjct: 73  CSDDVFPWSKAKKGSQEFDPLEDKKMYVVHAEANAILNSNGMSLSGTRLYTTLFPCNECA 132

Query: 497 KMIIQSGIKKVVYLSDKNAHRPEYIASKKMFNASNIIYKQYKPRRSKIEINFD 655
           K+IIQ GI +V+YLSDK A +P Y ASK+M +A  + YK++ P++  I I+FD
Sbjct: 133 KLIIQVGISQVLYLSDKYADKPTYRASKRMLDAVGVEYKRHIPQKKTITIDFD 185


>AY094910-1|AAM11263.1|  420|Drosophila melanogaster RH14937p
           protein.
          Length = 420

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 12/50 (24%), Positives = 25/50 (50%)
 Frame = -3

Query: 730 LF*LINLIVIYKQPLFCWANQIPVNVEIYFNFTSPWFVLFIYYIGSIKHL 581
           LF L ++I+    P + W   + ++  I FN    W +   +++ S+ H+
Sbjct: 251 LFALCSIILPVAVPWYFWNEDLWMSFWINFNMRFTWTLNVAFFVNSVAHM 300


>AE014297-4561|AAF57022.2|  420|Drosophila melanogaster CG9743-PA
           protein.
          Length = 420

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 12/50 (24%), Positives = 25/50 (50%)
 Frame = -3

Query: 730 LF*LINLIVIYKQPLFCWANQIPVNVEIYFNFTSPWFVLFIYYIGSIKHL 581
           LF L ++I+    P + W   + ++  I FN    W +   +++ S+ H+
Sbjct: 251 LFALCSIILPVAVPWYFWNEDLWMSFWINFNMRFTWTLNVAFFVNSVAHM 300


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,788,207
Number of Sequences: 53049
Number of extensions: 783094
Number of successful extensions: 1846
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1843
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3798466620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)