Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt29d12
         (759 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023828-5|CAA19450.1|  260|Caenorhabditis elegans Hypothetical ...   131   6e-31
Z68493-5|CAA92800.1|  237|Caenorhabditis elegans Hypothetical pr...    42   4e-04
Z81039-3|CAB02775.1|  325|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>AL023828-5|CAA19450.1|  260|Caenorhabditis elegans Hypothetical
           protein Y17G7B.3 protein.
          Length = 260

 Score =  131 bits (316), Expect = 6e-31
 Identities = 63/158 (39%), Positives = 93/158 (58%), Gaps = 3/158 (1%)
 Frame = +3

Query: 270 VKILPALQDNYMYLIVDKATKEAAI-VDPVEPKTVLKAVEEQGVNLXXXXXXXXXXXXAG 446
           VK L    DN+MY++   +   AA+ VD V  +   +  +++ +++             G
Sbjct: 4   VKSLLRRADNFMYIVKKSSEARAALLVDLVNEEDYKELADKENIDITAVLTTHHHYDHCG 63

Query: 447 GNEDLIKERPGLIVYGGDDRIGALTKKVEHNTKFKIGNLNVQCLFTPCHTTGHICYFVTA 626
           GNE   ++ P +++ GGD RI A+ + V+H    +   L ++CL TPCHT+GHICY +T 
Sbjct: 64  GNEGFRRQFPNVMILGGDSRIPAMDRHVKHGDMAEFAGLQIKCLSTPCHTSGHICYHITN 123

Query: 627 PEEGNDS--VVFTGDTLFLGGCGRFFEGTADQMYQSIN 734
           P   + S  VVFTGDTLF+ GCGRFFEGTA QM  ++N
Sbjct: 124 PAADSTSPGVVFTGDTLFIAGCGRFFEGTAPQMDVALN 161


>Z68493-5|CAA92800.1|  237|Caenorhabditis elegans Hypothetical
           protein C33A12.7 protein.
          Length = 237

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 37/150 (24%), Positives = 59/150 (39%), Gaps = 4/150 (2%)
 Frame = +3

Query: 300 YMYLIVDKATKEAAIVDPVEPKTV--LKAVEEQGVNLXXXXXXXXXXXXAGGNEDLIKER 473
           Y Y+I    T +A I+DPV       ++ + +  ++L              G   L    
Sbjct: 22  YTYIIGCHKTGKAVIIDPVVDTVSRDIQIIRDLNLDLIYGLNTHVHADHITGTNSLKTVF 81

Query: 474 PGLIVYGGDDRIGALTKKVEHNTKFKIGNLNVQCLFTPCHTTGHICYFVTAPEEGNDSVV 653
           P +         G   K V      +IG L ++   TP HT G + Y      E +    
Sbjct: 82  PTMKSVLSSKSGGEADKYVSDGEIIEIGGLKLEVRETPGHTNGCLTYV-----EHSLRSA 136

Query: 654 FTGDTLFLGGCGR--FFEGTADQMYQSINN 737
           FTGD L +  CGR  F +G    ++ S+++
Sbjct: 137 FTGDALLIRACGRTDFQQGNPASLFDSVHD 166


>Z81039-3|CAB02775.1|  325|Caenorhabditis elegans Hypothetical
           protein C25D7.4 protein.
          Length = 325

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +3

Query: 525 KVEHNTKFKIGNLNVQCLFTPCHTTGHICYFVTAPEEGNDSVVFTGD 665
           K+E++ +F      V  LF P +T G++ YF      GN  ++F  D
Sbjct: 268 KIEYSMQFVAHRFEVARLFQPSNTNGNLDYFAYKCSGGN-YIIFLDD 313


>Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical
           protein F31C3.3 protein.
          Length = 2029

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 329 CCLVYNQVHVVVLECWQDFYIHVFI 255
           C LV N+VH+VV+    D  +HV I
Sbjct: 18  CGLVVNRVHIVVMNTIPDCLLHVTI 42


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,178,340
Number of Sequences: 27780
Number of extensions: 325594
Number of successful extensions: 793
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)