Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt29d06
(726 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatas... 413 e-116
SPCC31H12.05c |sds21||serine/threonine protein phosphatase Sds21... 394 e-111
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 312 3e-86
SPBC16H5.07c |ppa2||serine/threonine protein phosphatase Ppa2|Sc... 231 8e-62
SPAC823.15 |ppa1||minor serine/threonine protein phosphatase Ppa... 229 3e-61
SPBC26H8.05c |||serine/threonine protein phosphatase |Schizosacc... 213 2e-56
SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces ... 210 1e-55
SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatas... 206 3e-54
SPBP4H10.04 |ppb1||calcineurin catalytic subunit Ppb1|Schizosacc... 200 2e-52
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 146 2e-36
SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit Rev3|Sch... 29 0.51
SPAC20H4.08 |||phosphatase activator |Schizosaccharomyces pombe|... 28 1.2
SPCC1235.03 |||SMR and CUE domain protein|Schizosaccharomyces po... 28 1.6
SPBC9B6.11c |||CCR4/nocturin family endoribonuclease|Schizosacch... 27 3.6
SPBC359.02 |alr2||alanine racemase Alr2 |Schizosaccharomyces pom... 26 4.8
SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|ch... 26 4.8
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 26 4.8
SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyce... 26 6.3
SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual 25 8.3
SPCC16C4.18c |taf50||histone H4-like TAF |Schizosaccharomyces po... 25 8.3
>SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatase
PP1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 413 bits (1017), Expect = e-116
Identities = 184/209 (88%), Positives = 195/209 (93%)
Frame = +3
Query: 99 LLLRGCRPGKTVQMSEAEVRGLCTKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLF 278
L +RG RPG+ VQ+SE E+R LC K+REIF+ QPILLELEAPLKICGDIHGQY DLLRLF
Sbjct: 16 LEVRGSRPGRQVQLSEDEIRFLCNKAREIFISQPILLELEAPLKICGDIHGQYYDLLRLF 75
Query: 279 EYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGF 458
EYGGFPPEANYLFLGDYVDRGKQSLE ICLLLAYKIKYPENFF+LRGNHECASINRIYGF
Sbjct: 76 EYGGFPPEANYLFLGDYVDRGKQSLEVICLLLAYKIKYPENFFILRGNHECASINRIYGF 135
Query: 459 YDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQGMEQIRRIMRPTDVP 638
YDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIF HGGLSPDL M+QI+RIMRPTDVP
Sbjct: 136 YDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFTMHGGLSPDLNSMDQIQRIMRPTDVP 195
Query: 639 DTGLLCDLLWSDPDKDVQGWGENDRGVSF 725
DTGLLCDLLWSDPDKD+ GWG+NDRGVSF
Sbjct: 196 DTGLLCDLLWSDPDKDLTGWGDNDRGVSF 224
>SPCC31H12.05c |sds21||serine/threonine protein phosphatase
Sds21|Schizosaccharomyces pombe|chr 3|||Manual
Length = 322
Score = 394 bits (970), Expect = e-111
Identities = 170/206 (82%), Positives = 191/206 (92%)
Frame = +3
Query: 108 RGCRPGKTVQMSEAEVRGLCTKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYG 287
R +P K VQ+S+AE+R LCT SR IFL QP+LLELEAPLKICGDIHGQY+DLLRLFEYG
Sbjct: 16 RNGKPSKQVQLSDAEIRYLCTTSRSIFLSQPMLLELEAPLKICGDIHGQYSDLLRLFEYG 75
Query: 288 GFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDE 467
G+PP+ANYLFLGDYVDRGKQSLE ICLL AYKIKYPENFFLLRGNHE ASINRIYGFYDE
Sbjct: 76 GYPPDANYLFLGDYVDRGKQSLEVICLLFAYKIKYPENFFLLRGNHEFASINRIYGFYDE 135
Query: 468 CKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQGMEQIRRIMRPTDVPDTG 647
CKRRY+IKLWKTFTDCFNC+P+AA+IDEKIFC HGGLSPDL ++QI+RI+RPTD+PDTG
Sbjct: 136 CKRRYSIKLWKTFTDCFNCMPVAAVIDEKIFCMHGGLSPDLNSLDQIQRIIRPTDIPDTG 195
Query: 648 LLCDLLWSDPDKDVQGWGENDRGVSF 725
LLCDL+WSDP+KD+ GWGENDRGVS+
Sbjct: 196 LLCDLVWSDPEKDLTGWGENDRGVSY 221
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 312 bits (766), Expect = 3e-86
Identities = 139/203 (68%), Positives = 160/203 (78%)
Frame = +3
Query: 117 RPGKTVQMSEAEVRGLCTKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFP 296
+ K+V + AE+ +C REIFL QP LLEL P+KI GD+HGQY+DL+RLFE GFP
Sbjct: 207 KSSKSVCLKNAEITSICMAVREIFLSQPTLLELTPPVKIVGDVHGQYSDLIRLFEMCGFP 266
Query: 297 PEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKR 476
P +NYLFLGDYVDRGKQSLETI LL YKI+YPENFFLLRGNHECA+I R+YGFYDECKR
Sbjct: 267 PSSNYLFLGDYVDRGKQSLETILLLFLYKIRYPENFFLLRGNHECANITRVYGFYDECKR 326
Query: 477 RYNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQGMEQIRRIMRPTDVPDTGLLC 656
R NIK+WKTF + FNCLPIA+++ KIFC HGGLSP L M+ IR I RPTDVPD GLL
Sbjct: 327 RCNIKIWKTFINTFNCLPIASVVAGKIFCVHGGLSPSLSHMDDIREIPRPTDVPDYGLLN 386
Query: 657 DLLWSDPDKDVQGWGENDRGVSF 725
DLLWSDP W +N+RGVSF
Sbjct: 387 DLLWSDPADTENDWEDNERGVSF 409
>SPBC16H5.07c |ppa2||serine/threonine protein phosphatase
Ppa2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 231 bits (565), Expect = 8e-62
Identities = 102/212 (48%), Positives = 144/212 (67%), Gaps = 1/212 (0%)
Frame = +3
Query: 93 WSLLLRGCRPGKTVQMSEAEVRGLCTKSREIFLQQPILLELEAPLKICGDIHGQYTDLLR 272
W L+ C P +SEA+V LC K+RE+ Q+ + + P+ +CGDIHGQ+ DL+
Sbjct: 26 WIEQLKKCEP-----LSEADVEMLCDKAREVLCQENNVQPVRNPVTVCGDIHGQFHDLME 80
Query: 273 LFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIY 452
LF+ GG P+ NYLF+GDYVDRG S+ET+ LL+A K++YP +LRGNHE I ++Y
Sbjct: 81 LFKIGGDVPDMNYLFMGDYVDRGYHSVETVSLLVAMKLRYPNRITILRGNHESRQITQVY 140
Query: 453 GFYDECKRRY-NIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQGMEQIRRIMRPT 629
GFYDEC R+Y + +WK FT+ F+ P+ A+I+++IFC HGGLSP + ++ +R + R
Sbjct: 141 GFYDECLRKYGSANVWKHFTNLFDYFPLTALIEDRIFCLHGGLSPSIDSLDHVRTLDRVQ 200
Query: 630 DVPDTGLLCDLLWSDPDKDVQGWGENDRGVSF 725
+VP G +CDLLWSDPD D GWG + RG +
Sbjct: 201 EVPHEGPMCDLLWSDPD-DRCGWGISPRGAGY 231
>SPAC823.15 |ppa1||minor serine/threonine protein phosphatase
Ppa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 229 bits (560), Expect = 3e-61
Identities = 103/221 (46%), Positives = 145/221 (65%), Gaps = 1/221 (0%)
Frame = +3
Query: 66 SDNIGFSFSWSLLLRGCRPGKTVQMSEAEVRGLCTKSREIFLQQPILLELEAPLKICGDI 245
S IG W L C P +SE +V +C ++E+ + + + P+ +CGDI
Sbjct: 4 SGKIGEVDRWIEQLSRCEP-----LSEEDVIQMCDLAKEVLSVESNVQSVRCPVTVCGDI 58
Query: 246 HGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 425
HGQ+ DL+ LF GG P+ NYLF+GDYVDRG S+ET+ LL+A+KI+YP+ +LRGNH
Sbjct: 59 HGQFHDLMELFNIGGPSPDTNYLFMGDYVDRGYHSVETVSLLIAFKIRYPQRITILRGNH 118
Query: 426 ECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQGME 602
E I ++YGFYDEC R+Y N +W+ FTD F+ LP+ A+I+++IFC HGGLSP + ++
Sbjct: 119 ESRQITQVYGFYDECLRKYGNANVWQYFTDLFDYLPLTALIEDRIFCLHGGLSPSIDTLD 178
Query: 603 QIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSF 725
+R + R +VP G +CDLLWSDPD D GWG + RG +
Sbjct: 179 HVRILDRVQEVPHEGPICDLLWSDPD-DRPGWGISPRGAGY 218
>SPBC26H8.05c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 213 bits (521), Expect = 2e-56
Identities = 95/195 (48%), Positives = 130/195 (66%), Gaps = 1/195 (0%)
Frame = +3
Query: 144 EAEVRGLCTKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANYLFLG 323
E+ V LC + R+I +++ + + +P+ ICGDIHGQ DLL LF GG P YLFLG
Sbjct: 21 ESNVVELCQRVRDILIEESNIQWISSPVTICGDIHGQLHDLLELFRIGGSCPGTKYLFLG 80
Query: 324 DYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWK 500
D+VDRG S+ET LLL K KYP+ L+RGNHE I ++YGFYDEC R+Y + +W+
Sbjct: 81 DFVDRGFYSVETFLLLLTLKCKYPKEMTLIRGNHESRQITQVYGFYDECVRKYGSANVWR 140
Query: 501 TFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQGMEQIRRIMRPTDVPDTGLLCDLLWSDPD 680
+ F+ L + A++D K+FC HGGLSP + ++QIR + R +VP G +CDLLWSDP+
Sbjct: 141 YCCEIFDYLSLGALVDGKVFCVHGGLSPSISSIDQIRLLDRKQEVPHEGAMCDLLWSDPE 200
Query: 681 KDVQGWGENDRGVSF 725
D+ GWG + RG F
Sbjct: 201 -DISGWGLSPRGAGF 214
>SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 307
Score = 210 bits (514), Expect = 1e-55
Identities = 95/197 (48%), Positives = 132/197 (67%), Gaps = 1/197 (0%)
Frame = +3
Query: 138 MSEAEVRGLCTKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANYLF 317
++E+ + LC+ ++E+ +Q+ ++ L P+ + GDIHGQ+ DLL +F GG P NYLF
Sbjct: 17 IAESVIAYLCSLAKEVLMQESNVVRLSTPITVVGDIHGQFDDLLEIFRIGGPCPYTNYLF 76
Query: 318 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 494
LGDYVDRG S+ETI LL+ K++YP+ LLRGNHE I + YGFY EC R+Y N +
Sbjct: 77 LGDYVDRGYYSIETITLLICLKLRYPKRITLLRGNHESRGITQTYGFYSECLRKYGNANV 136
Query: 495 WKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQGMEQIRRIMRPTDVPDTGLLCDLLWSD 674
WK FTD F+ L ++A ID+ IFC HGGLSP +Q ++QI + R + P G + DL+WSD
Sbjct: 137 WKYFTDIFDFLTLSATIDDTIFCVHGGLSPSIQHIDQILVLDRFREFPHEGPMADLVWSD 196
Query: 675 PDKDVQGWGENDRGVSF 725
PD VQ + + RG F
Sbjct: 197 PDPSVQEFSLSPRGAGF 213
>SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatase
Ppe1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 305
Score = 206 bits (502), Expect = 3e-54
Identities = 91/212 (42%), Positives = 134/212 (63%), Gaps = 1/212 (0%)
Frame = +3
Query: 93 WSLLLRGCRPGKTVQMSEAEVRGLCTKSREIFLQQPILLELEAPLKICGDIHGQYTDLLR 272
W +R C+ + E +++ LC + I +++ + + P+ +CGDIHGQ+ DLL
Sbjct: 7 WIATVRKCK-----YLPEHQLKRLCEMVKVILMEESNIQPVRTPVTVCGDIHGQFYDLLE 61
Query: 273 LFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIY 452
LF GG P NY+F+GD+VDRG SLET L + K +YP+ LLRGNHE I ++Y
Sbjct: 62 LFRVGGELPSTNYIFMGDFVDRGYFSLETFTLFMLLKARYPDKITLLRGNHESRQITQVY 121
Query: 453 GFYDECKRRY-NIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQGMEQIRRIMRPT 629
GFYDEC+ +Y N +WK F+ L +AA+ID KI C HGGLSP+++ ++QIR + R
Sbjct: 122 GFYDECQTKYGNANVWKYCCQVFDFLTLAAVIDNKILCVHGGLSPEVRTLDQIRILARAQ 181
Query: 630 DVPDTGLLCDLLWSDPDKDVQGWGENDRGVSF 725
++P G CDL+WSDP+ D++ W + RG +
Sbjct: 182 EIPHEGSFCDLMWSDPE-DIESWTVSPRGAGW 212
>SPBP4H10.04 |ppb1||calcineurin catalytic subunit
Ppb1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 554
Score = 200 bits (488), Expect = 2e-52
Identities = 91/184 (49%), Positives = 124/184 (67%)
Frame = +3
Query: 135 QMSEAEVRGLCTKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANYL 314
++SE + + K+ EI + L+E++AP+ +CGDIHGQY DL++LFE GG P YL
Sbjct: 84 RLSEEQTLYIIKKATEILKSEDNLIEVDAPVTVCGDIHGQYYDLMKLFEVGGNPANTQYL 143
Query: 315 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKL 494
FLGDYVDRG S+E + L A KI YP+ +LLRGNHECA + + F EC +YNIK+
Sbjct: 144 FLGDYVDRGYFSIECLLYLWALKIWYPKTLWLLRGNHECAHLTDYFTFKLECTHKYNIKV 203
Query: 495 WKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQGMEQIRRIMRPTDVPDTGLLCDLLWSD 674
++ FN LP+AAI++++ C HGGLSP+L + IR I R + P GL+CDLLWSD
Sbjct: 204 YEACLQSFNALPLAAIMNKQFLCVHGGLSPELHTLNDIRMINRFCEPPTHGLMCDLLWSD 263
Query: 675 PDKD 686
P +D
Sbjct: 264 PLED 267
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 146 bits (355), Expect = 2e-36
Identities = 76/189 (40%), Positives = 113/189 (59%), Gaps = 8/189 (4%)
Frame = +3
Query: 177 REIFLQQPILLEL----EAPLKICGDIHGQYTDLLRLFEYGGFPPEAN-YLFLGDYVDRG 341
+E+ + P L+++ + L ICGD HGQY DLL +F+ G P N YLF GD+VDRG
Sbjct: 192 KELLEKTPSLIDIPVKGDETLVICGDTHGQYFDLLNIFKLHGPPSPTNKYLFNGDFVDRG 251
Query: 342 KQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFN 521
S E L AYK+ YP+ F+ RGNHE +N++YGF EC+ +YN + + F++ F+
Sbjct: 252 SWSTEVAFTLYAYKLLYPDAVFINRGNHETDDMNKVYGFEGECRSKYNERTFNIFSETFS 311
Query: 522 CLPIAAIIDEKIFCCHGGL-SPDLQGMEQIRRIMR--PTDVPDTGLLCDLLWSDPDKDVQ 692
LP+ ++I + HGGL S D ++Q+R I R +GL+ ++LW+DP +
Sbjct: 312 LLPLGSLISDSYLVVHGGLFSDDNVTLDQLRNIDRFSKKQPGQSGLMMEMLWTDP-QPAP 370
Query: 693 GWGENDRGV 719
G G + RGV
Sbjct: 371 GRGPSKRGV 379
>SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit
Rev3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1480
Score = 29.5 bits (63), Expect = 0.51
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +3
Query: 510 DCFNCLPIAAIIDEKIFCC-HGGLSPD 587
D ++C+ I A+ ++FCC HGGL+PD
Sbjct: 646 DPYSCVRILAL---ELFCCSHGGLTPD 669
>SPAC20H4.08 |||phosphatase activator |Schizosaccharomyces pombe|chr
1|||Manual
Length = 270
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 664 SKSQSNPVSGTSVGRIILLICSIPCKSGDKPPWQQKIFSSII 539
SK NP+S T++ + C+I S +K P QKI S ++
Sbjct: 106 SKIAFNPISNTTLVLFLTECCNIYLFSENKKPVDQKIRSDLL 147
>SPCC1235.03 |||SMR and CUE domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 399
Score = 27.9 bits (59), Expect = 1.6
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -1
Query: 354 PVTVYHDLHSHQGISNWLLAEILHIQRDVANLCTD 250
P+T+ + +H HQ +SN E++ Q + L D
Sbjct: 129 PITIRNLIHRHQPLSNITNNELMKYQEEATQLAKD 163
>SPBC9B6.11c |||CCR4/nocturin family
endoribonuclease|Schizosaccharomyces pombe|chr
2|||Manual
Length = 502
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -3
Query: 229 LSGASNSSNMGCCRNISLDFVQSPRTSASDICTVLPGLHPRSNKDQLNENPIL 71
L G N+ N+GCC + L+ V P + + T HP + ++L + IL
Sbjct: 229 LPGRMNTKNIGCC--VRLERVDDP-SRGLFLATTHLFWHPYGSYERLRQGAIL 278
>SPBC359.02 |alr2||alanine racemase Alr2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 370
Score = 26.2 bits (55), Expect = 4.8
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +3
Query: 387 KYPENFFLLRGNHECASINRI--YGFYD-ECKRRYNIKLWKTFTDCFNCLP 530
+Y + + LL+ + + I + + F D K Y +K W+ F CLP
Sbjct: 144 EYADKYRLLKNHKNVSGIVKATHFAFADIPEKSEYTLKQWRIFEKAAGCLP 194
>SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|chr
3|||Manual
Length = 923
Score = 26.2 bits (55), Expect = 4.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 288 GFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKY 392
GF + + L LG Y RGKQS + L ++ Y
Sbjct: 482 GFGEDLDCLILGGYFGRGKQSGKINSFLCGLRMDY 516
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 26.2 bits (55), Expect = 4.8
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Frame = +3
Query: 150 EVRGLCTKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRL------FEYGGFPPEANY 311
+V+ ++ +FL P + +LE L+ G + L RL EY P +
Sbjct: 123 QVKASPIDAQYVFLAPPSIEQLEVRLRGRGT-ENESAILQRLERARAEIEYSEKPGNFDA 181
Query: 312 LFLGDYVDRGKQSLETICL 368
L + D V++ + LE ICL
Sbjct: 182 LIVNDDVEKAYKQLEAICL 200
>SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 906
Score = 25.8 bits (54), Expect = 6.3
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -3
Query: 247 CISPQILSGASNSSNMGCCRNISLDFVQSPRTSASDICTVLPG 119
C + + S NSS+ C R+ L F S R IC PG
Sbjct: 218 CKTTPLQSREKNSSSFVCTRSSGLTFYDSKR---EKICFTFPG 257
>SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1496
Score = 25.4 bits (53), Expect = 8.3
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -2
Query: 548 INYSSNWQAVKAIRESLPQFYIVSAFALVIKTINAVYA 435
+NYS NW VK I E A + K+I AVY+
Sbjct: 1344 VNYSKNWWNVK-ILEHFDFILDTEAASTFPKSITAVYS 1380
>SPCC16C4.18c |taf50||histone H4-like TAF |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 452
Score = 25.4 bits (53), Expect = 8.3
Identities = 7/19 (36%), Positives = 16/19 (84%)
Frame = -2
Query: 548 INYSSNWQAVKAIRESLPQ 492
I+YS++W A++ ++ ++PQ
Sbjct: 123 ISYSAHWLAIEGVQPAIPQ 141
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,350,607
Number of Sequences: 5004
Number of extensions: 75905
Number of successful extensions: 204
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 341222980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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