Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt29d02
         (753 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113514-1|AAM29519.1|  100|Drosophila melanogaster RE59545p pro...    83   5e-16
AL024456-2|CAA19662.1|  100|Drosophila melanogaster EG:131F2.3 p...    83   5e-16
AE014298-265|AAF45672.1|  100|Drosophila melanogaster CG14812-PA...    83   5e-16

>AY113514-1|AAM29519.1|  100|Drosophila melanogaster RE59545p
           protein.
          Length = 100

 Score = 82.6 bits (195), Expect = 5e-16
 Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
 Frame = +1

Query: 61  MENDLDKVVEEIMSMPNVNGCLIADPQGLCLASKGAAHVDSAGIIVAISEQACKIQPN-M 237
           ME  L+KV+ EI +  +  G L+A+ QGLCL +KG    + +GI +AISEQ  K++ N  
Sbjct: 1   MEQQLEKVLAEIAARQDTVGALLANRQGLCLGTKGDIDPNVSGIGMAISEQVAKLELNAT 60

Query: 238 KPPTVCLETDKKQCLIQRHGTITGAIFKLKT 330
            P T+CL +  K+C+IQ+ G ITG IFK  T
Sbjct: 61  APATICLYSGNKRCVIQKDGEITGVIFKQPT 91


>AL024456-2|CAA19662.1|  100|Drosophila melanogaster EG:131F2.3
           protein.
          Length = 100

 Score = 82.6 bits (195), Expect = 5e-16
 Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
 Frame = +1

Query: 61  MENDLDKVVEEIMSMPNVNGCLIADPQGLCLASKGAAHVDSAGIIVAISEQACKIQPN-M 237
           ME  L+KV+ EI +  +  G L+A+ QGLCL +KG    + +GI +AISEQ  K++ N  
Sbjct: 1   MEQQLEKVLAEIAARQDTVGALLANRQGLCLGTKGDIDPNVSGIGMAISEQVAKLELNAT 60

Query: 238 KPPTVCLETDKKQCLIQRHGTITGAIFKLKT 330
            P T+CL +  K+C+IQ+ G ITG IFK  T
Sbjct: 61  APATICLYSGNKRCVIQKDGEITGVIFKQPT 91


>AE014298-265|AAF45672.1|  100|Drosophila melanogaster CG14812-PA
           protein.
          Length = 100

 Score = 82.6 bits (195), Expect = 5e-16
 Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
 Frame = +1

Query: 61  MENDLDKVVEEIMSMPNVNGCLIADPQGLCLASKGAAHVDSAGIIVAISEQACKIQPN-M 237
           ME  L+KV+ EI +  +  G L+A+ QGLCL +KG    + +GI +AISEQ  K++ N  
Sbjct: 1   MEQQLEKVLAEIAARQDTVGALLANRQGLCLGTKGDIDPNVSGIGMAISEQVAKLELNAT 60

Query: 238 KPPTVCLETDKKQCLIQRHGTITGAIFKLKT 330
            P T+CL +  K+C+IQ+ G ITG IFK  T
Sbjct: 61  APATICLYSGNKRCVIQKDGEITGVIFKQPT 91


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,189,044
Number of Sequences: 53049
Number of extensions: 554904
Number of successful extensions: 1150
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)