Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt29c22
(702 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0293 - 28254673-28254878,28255189-28255306,28255767-282559... 35 0.054
11_03_0065 - 9522478-9525335,9525513-9526028,9526432-9527247,952... 31 1.2
07_03_1632 + 28271559-28271645,28272641-28272713,28273030-282733... 31 1.2
09_04_0118 - 14816587-14816754,14816866-14816994,14817744-148178... 30 1.5
09_02_0234 - 6116931-6117052,6117549-6118369,6118573-6118601,611... 30 1.5
12_02_1151 + 26488686-26488792,26488897-26489142,26490246-264903... 30 2.0
04_04_1070 + 30579263-30579861,30579970-30580095,30580190-30580394 30 2.0
06_01_0865 - 6571056-6571190,6571737-6571977,6572279-6572401,657... 29 2.7
04_04_1390 - 33184233-33184478,33184601-33184705,33184783-331848... 29 2.7
09_04_0512 + 18226981-18227143,18227648-18229555,18229649-182302... 29 3.6
04_04_1293 - 32418156-32418584,32420155-32420270,32421798-32421864 29 4.7
02_03_0365 - 18198669-18198809,18198887-18198979,18199078-181991... 29 4.7
09_01_0027 - 469856-470773,470780-471261,471296-471408,471453-47... 28 6.2
09_04_0151 - 15154063-15154296,15155616-15155660,15155749-151558... 28 8.3
07_02_0012 - 11770058-11770770,11770919-11771000,11771064-117710... 28 8.3
06_01_0583 - 4174037-4174114,4174215-4174352,4174447-4174555,417... 28 8.3
01_06_1767 + 39766350-39766508,39766602-39766654,39766763-397668... 28 8.3
>01_06_0293 -
28254673-28254878,28255189-28255306,28255767-28255961,
28256701-28256800,28256887-28256972,28257078-28257239,
28257965-28258101,28258233-28258281,28258688-28258746,
28258862-28258896,28259384-28259433,28260173-28260332,
28260898-28260963,28261065-28261162,28261649-28261696,
28262114-28262242,28262667-28262769,28262858-28262954,
28263181-28263241,28263659-28263740,28263845-28263962,
28264039-28266325
Length = 1481
Score = 35.1 bits (77), Expect = 0.054
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 640 KYHPIKDACWSKGDPVPYLAL 702
KY PI+ ACW+ G P PYL L
Sbjct: 756 KYLPIEHACWTAGQPAPYLHL 776
>11_03_0065 -
9522478-9525335,9525513-9526028,9526432-9527247,
9527440-9527767
Length = 1505
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +1
Query: 472 KSLSRDEVKENSLKLKIVGSKEKDNIVKNTEHIDNIENESEEIQKVAENAYNPSKSKYHP 651
K L +EN+L +I +E+DN + + ID+++ E E + + E + + Y
Sbjct: 343 KLLLESYEEENNLIEEIENIEEEDNAEQYNDFIDSLDEEGESAKVLWEQWVEKNPNNYEE 402
Query: 652 IKDA 663
+K A
Sbjct: 403 LKRA 406
>07_03_1632 +
28271559-28271645,28272641-28272713,28273030-28273361,
28273455-28274791,28275451-28275848,28275963-28277644,
28277727-28277884,28278645-28278802,28279110-28279270,
28279826-28280014
Length = 1524
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 139 NGGSKVSHVNGDTSPISDEKDKPSERQQSNSIDNDGDSQDSLKPKNKA 282
N VS NG P+SD+ K E QS ++ +QDSL +K+
Sbjct: 52 NLAPSVSKHNGSMVPLSDDSSK-KEVHQSTKVERASSTQDSLNGLSKS 98
>09_04_0118 -
14816587-14816754,14816866-14816994,14817744-14817824,
14817943-14818047,14818137-14818253,14818335-14818475,
14818965-14819039,14819135-14819236,14819318-14819413,
14819838-14819935,14820056-14820141,14820158-14820231,
14820648-14820758,14821054-14821152,14821941-14822008,
14822855-14822885,14823041-14823148
Length = 562
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 466 GAKSLSRDEVKENSLKLKIVG-SKEKDNIVKNTEHIDNIENESEEIQKVAENAYNPSKSK 642
GA ++ +E ++ LK+ +V K DN + + + EE Q+ +AY ++S
Sbjct: 309 GANAI-HEECRKRKLKVSVVAVPKTIDNDILFMDKTFGFDTAVEEAQRAINSAYIEARSA 367
Query: 643 YHPI 654
YH I
Sbjct: 368 YHGI 371
>09_02_0234 -
6116931-6117052,6117549-6118369,6118573-6118601,
6118711-6119020,6119469-6119476,6120104-6120232,
6120341-6120445
Length = 507
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +1
Query: 73 MAQRSITSFFKKTPFTPMEIKS---NGGSKVSHVNGDTSPISDEKDKPSERQQSNSIDND 243
MA + ++TPF+P++I + GS + N D +P S+ D++
Sbjct: 241 MADLHLFKAIQRTPFSPLKIDNVEVIAGSSLQEDNIDYNPEMIGVADDQHSISSDDTDHE 300
Query: 244 GDSQDSLKPKNKAKRQR 294
+ D ++ N+ KRQR
Sbjct: 301 QEKVDYVEKLNEMKRQR 317
>12_02_1151 +
26488686-26488792,26488897-26489142,26490246-26490381,
26490502-26490561,26490648-26490740,26491421-26491663,
26491828-26491968,26492312-26492482,26492813-26492899,
26492954-26493211,26493300-26493445,26493535-26493922,
26493935-26494092,26494267-26494540,26494721-26494894
Length = 893
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 85 SITSFFKKTPFTPMEIKSNGGSKVSHVNGDTSPISD--EKDKPSERQQSNSIDNDGDSQD 258
+I ++K TP + + S H+ G +SP+ + + D S+ +S SI+N+ +
Sbjct: 593 TIFELYQKV-MTPFRVPKDDSSGADHIIGKSSPVEETTDVDMNSDATESTSINNNDCDDE 651
Query: 259 SL 264
++
Sbjct: 652 TM 653
>04_04_1070 + 30579263-30579861,30579970-30580095,30580190-30580394
Length = 309
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = +1
Query: 25 TSSKLKF*NIPETSHNMAQRSITSFFKKTPFTPMEIKSNGGSKV-SHVNGDTSPISDEKD 201
TSS+ + + T N+ + TS + F+ + SK S ++ P+S K
Sbjct: 118 TSSQPQTLTLDFTKPNLTMSAATSVTSTSFFSSVTAGEGSVSKGRSLLSSGKPPLSGHKR 177
Query: 202 KPSERQQSNSIDNDGDSQDSLKPKNKAKR 288
KP S + N G S + KN+ KR
Sbjct: 178 KPCAGGHSEATANGGRCHCSKRRKNRVKR 206
>06_01_0865 -
6571056-6571190,6571737-6571977,6572279-6572401,
6572501-6572527,6573954-6574009
Length = 193
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -3
Query: 226 WIVVFQKACLFRRIWVMCPHLHGLLWIHHYFLFP 125
W+ + A LF W++ P HG +++ +F+ P
Sbjct: 69 WLPFWSYAKLFFNCWLVLPCFHGAAYVYDHFVRP 102
>04_04_1390 -
33184233-33184478,33184601-33184705,33184783-33184890,
33184967-33185101,33185263-33185363,33185495-33185564,
33185642-33185758,33186001-33186138,33186371-33186439,
33186556-33186645,33186758-33186940,33187020-33187052
Length = 464
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 178 SPISDEKDKPSERQQSNSIDNDGDSQDSLKPKNKAKRQR 294
S +S+++ P+E + DNDGD Q K K ++++
Sbjct: 419 SELSNKRPPPTEHVEPTKEDNDGDKQKKRKTGKKHEKKK 457
>09_04_0512 +
18226981-18227143,18227648-18229555,18229649-18230295,
18230710-18231949,18232085-18232419,18232500-18232577,
18232872-18232978,18233020-18233062
Length = 1506
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 124 MEIKSNGGSKVSHVNGDTSPISDEKDKPSERQQSNSIDND-GDSQDSLK 267
M +KS + VSH N S I ++ ER S+DN+ G+S L+
Sbjct: 829 MSLKSEERNAVSHGNISVSSIHNKTSSSPERYNKASLDNENGNSPGQLQ 877
>04_04_1293 - 32418156-32418584,32420155-32420270,32421798-32421864
Length = 203
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 190 DEKDKPSERQQSNSIDNDGDSQDSLKPKNKAKR 288
D+ E Q N D + D +DSL+P K K+
Sbjct: 171 DDGVDEEEEDQDNEDDEEDDDEDSLQPPKKRKK 203
>02_03_0365 -
18198669-18198809,18198887-18198979,18199078-18199138,
18199291-18199336,18199417-18199682,18199766-18200744,
18201012-18201564,18201661-18201909,18201995-18202234
Length = 875
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +1
Query: 79 QRSITSFFKKTPFTPMEIKSNGGSKVSHVNGDTSPISDEKDKPSERQQSNSIDNDGDSQD 258
++S+ P P E S GS V+H + + S SD PS +++ +GD +D
Sbjct: 17 EQSLAVVVAPEPTVPPEDSS--GSDVAHEDDEYSSPSDPCPSPSPKRRKKGDGEEGD-KD 73
Query: 259 SLKPK 273
+ PK
Sbjct: 74 YIPPK 78
>09_01_0027 -
469856-470773,470780-471261,471296-471408,471453-472003,
472089-472328
Length = 767
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +1
Query: 79 QRSITSFFKKTPFTPMEIKSNGGSKVSHVNGDTSPISDEKDKPSERQQSNSIDNDGDSQD 258
++S+ P P E S GS ++H + + S SD PS +++ +GD +D
Sbjct: 17 EQSLAVVVASEPTVPPEDSS--GSDIAHEDDEYSLPSDPCPSPSPKRRKKGDSEEGD-KD 73
Query: 259 SLKPK 273
+ PK
Sbjct: 74 YIPPK 78
>09_04_0151 - 15154063-15154296,15155616-15155660,15155749-15155820,
15155932-15156024,15156282-15156351,15156716-15156912,
15156946-15157215,15158620-15158757,15158841-15158930,
15159041-15159247,15159987-15160154,15160300-15160503,
15160584-15160670,15160748-15160861,15161689-15161835,
15161914-15162063,15162211-15162276,15162376-15162480,
15162625-15162798,15162930-15163154,15163534-15163590,
15163858-15164019,15164234-15164302,15164391-15164471,
15164823-15164925,15165011-15165156,15165285-15165359,
15165441-15165508,15165586-15165667,15165745-15165858,
15166358-15166476,15166692-15166781,15166862-15166988
Length = 1382
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/41 (31%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +1
Query: 493 VKENSLKLKIVG-SKEKDNIVKNTEHIDNIENESEEIQKVA 612
V EN L +++ ++E+D ++ ++++++ NESE IQ A
Sbjct: 1232 VNENELHQQLLSITEERDKLLSEIKYMNSVINESELIQAKA 1272
>07_02_0012 -
11770058-11770770,11770919-11771000,11771064-11771072,
11771630-11771877,11772006-11772183,11772270-11772278
Length = 412
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +1
Query: 172 DTSPISDEKDKPSERQQSNSID--NDGDSQDSLKP 270
+ + D+K++P E+++ D N+G D LKP
Sbjct: 274 EADQMKDQKEEPEEKEKKEEPDEKNEGGEADDLKP 308
>06_01_0583 -
4174037-4174114,4174215-4174352,4174447-4174555,
4174857-4174945,4175218-4175307,4175570-4175653,
4177508-4177759
Length = 279
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 109 TPFTPMEIKSNGGSKVSHVNGDTSPISDEKDKPSERQQ 222
T +TP++ S GGS+ + PI D K + S R+Q
Sbjct: 120 TIYTPLKEDSGGGSESATPPTPIEPIHDGKIRASSREQ 157
>01_06_1767 +
39766350-39766508,39766602-39766654,39766763-39766829,
39766929-39766984,39767287-39767791,39767981-39768069,
39768678-39768768,39769052-39769177,39769256-39769513,
39769748-39770029
Length = 561
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -2
Query: 305 ELITRCRLALFFGFKESWESPSLSMLLDCCLSEGLSFSSDMGD 177
EL+ R AL +E W+S +LS L D + G+S SS G+
Sbjct: 82 ELVER---ALREAMEEGWDSTALSQLEDQRIDGGMSASSTFGN 121
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.310 0.127 0.353
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,360,771
Number of Sequences: 37544
Number of extensions: 305367
Number of successful extensions: 830
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
- SilkBase 1999-2023 -