Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt29c22
(702 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M36067-1|AAA59518.1| 919|Homo sapiens LIG1 protein. 50 6e-06
BC110622-1|AAI10623.1| 801|Homo sapiens LIG1 protein protein. 50 6e-06
BC108318-1|AAI08319.1| 919|Homo sapiens ligase I, DNA, ATP-depe... 50 6e-06
AF527418-1|AAM77697.1| 919|Homo sapiens ligase I, DNA, ATP-depe... 50 6e-06
AB208791-1|BAD92028.1| 832|Homo sapiens DNA ligase I variant pr... 50 6e-06
Z75889-1|CAI10806.2| 1447|Homo sapiens androgen-induced prolifer... 32 2.3
U95825-1|AAD22134.2| 1391|Homo sapiens androgen-induced prostate... 32 2.3
AL138820-1|CAH73160.2| 1447|Homo sapiens androgen-induced prolif... 32 2.3
AL137201-1|CAB69911.1| 1447|Homo sapiens hypothetical protein pr... 32 2.3
AK026889-1|BAB15584.1| 125|Homo sapiens protein ( Homo sapiens ... 32 2.3
AB023196-1|BAA76823.2| 1483|Homo sapiens KIAA0979 protein protein. 32 2.3
BC022003-1|AAH22003.1| 549|Homo sapiens myotubularin related pr... 30 9.2
BC012117-1|AAH12117.1| 291|Homo sapiens SDCCAG10 protein protein. 30 9.2
AY358569-1|AAQ88932.1| 472|Homo sapiens SDCCAG10 protein. 30 9.2
AL162056-1|CAB82395.1| 1254|Homo sapiens hypothetical protein pr... 30 9.2
AL139333-5|CAI15284.1| 2369|Homo sapiens dopey family member 1 p... 30 9.2
AL139333-4|CAM21599.1| 2465|Homo sapiens dopey family member 1 p... 30 9.2
AL121716-2|CAI42426.1| 2369|Homo sapiens dopey family member 1 p... 30 9.2
AL121716-1|CAI42425.2| 2465|Homo sapiens dopey family member 1 p... 30 9.2
AK027030-1|BAB15631.1| 1117|Homo sapiens protein ( Homo sapiens ... 30 9.2
AF039693-1|AAC18042.1| 332|Homo sapiens unknown protein protein. 30 9.2
AF039692-1|AAC18041.1| 372|Homo sapiens antigen NY-CO-10 protein. 30 9.2
AB029040-1|BAA83069.2| 1558|Homo sapiens KIAA1117 protein protein. 30 9.2
>M36067-1|AAA59518.1| 919|Homo sapiens LIG1 protein.
Length = 919
Score = 50.4 bits (115), Expect = 6e-06
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +1
Query: 616 NAYNPSKSKYHPIKDACWSKGDPVPYLAL 702
+ YNP+K+ YHP++DACW G VPYLA+
Sbjct: 264 SGYNPAKNNYHPVEDACWKPGQKVPYLAV 292
>BC110622-1|AAI10623.1| 801|Homo sapiens LIG1 protein protein.
Length = 801
Score = 50.4 bits (115), Expect = 6e-06
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +1
Query: 616 NAYNPSKSKYHPIKDACWSKGDPVPYLAL 702
+ YNP+K+ YHP++DACW G VPYLA+
Sbjct: 264 SGYNPAKNNYHPVEDACWKPGQKVPYLAV 292
>BC108318-1|AAI08319.1| 919|Homo sapiens ligase I, DNA,
ATP-dependent protein.
Length = 919
Score = 50.4 bits (115), Expect = 6e-06
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +1
Query: 616 NAYNPSKSKYHPIKDACWSKGDPVPYLAL 702
+ YNP+K+ YHP++DACW G VPYLA+
Sbjct: 264 SGYNPAKNNYHPVEDACWKPGQKVPYLAV 292
>AF527418-1|AAM77697.1| 919|Homo sapiens ligase I, DNA,
ATP-dependent protein.
Length = 919
Score = 50.4 bits (115), Expect = 6e-06
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +1
Query: 616 NAYNPSKSKYHPIKDACWSKGDPVPYLAL 702
+ YNP+K+ YHP++DACW G VPYLA+
Sbjct: 264 SGYNPAKNNYHPVEDACWKPGQKVPYLAV 292
>AB208791-1|BAD92028.1| 832|Homo sapiens DNA ligase I variant
protein.
Length = 832
Score = 50.4 bits (115), Expect = 6e-06
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +1
Query: 616 NAYNPSKSKYHPIKDACWSKGDPVPYLAL 702
+ YNP+K+ YHP++DACW G VPYLA+
Sbjct: 295 SGYNPAKNNYHPVEDACWKPGQKVPYLAV 323
>Z75889-1|CAI10806.2| 1447|Homo sapiens androgen-induced proliferation
inhibitor protein.
Length = 1447
Score = 31.9 bits (69), Expect = 2.3
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1
Query: 145 GSKVSHVNGDTSPISDEKDKPSERQQSNSIDNDGDSQDSLKPKNKAKRQR 294
GS+ S G T+ SDE+ P E++ I + D Q+S P K KR R
Sbjct: 1245 GSQRSRKRGHTASESDEQQWPEEKRLKEDILENEDEQNS--PPKKGKRGR 1292
>U95825-1|AAD22134.2| 1391|Homo sapiens androgen-induced prostate
proliferative shutoff associated protein protein.
Length = 1391
Score = 31.9 bits (69), Expect = 2.3
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1
Query: 145 GSKVSHVNGDTSPISDEKDKPSERQQSNSIDNDGDSQDSLKPKNKAKRQR 294
GS+ S G T+ SDE+ P E++ I + D Q+S P K KR R
Sbjct: 1245 GSQRSRKRGHTASESDEQQWPEEKRLKEDILENEDEQNS--PPKKGKRGR 1292
>AL138820-1|CAH73160.2| 1447|Homo sapiens androgen-induced
proliferation inhibitor protein.
Length = 1447
Score = 31.9 bits (69), Expect = 2.3
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1
Query: 145 GSKVSHVNGDTSPISDEKDKPSERQQSNSIDNDGDSQDSLKPKNKAKRQR 294
GS+ S G T+ SDE+ P E++ I + D Q+S P K KR R
Sbjct: 1245 GSQRSRKRGHTASESDEQQWPEEKRLKEDILENEDEQNS--PPKKGKRGR 1292
>AL137201-1|CAB69911.1| 1447|Homo sapiens hypothetical protein
protein.
Length = 1447
Score = 31.9 bits (69), Expect = 2.3
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1
Query: 145 GSKVSHVNGDTSPISDEKDKPSERQQSNSIDNDGDSQDSLKPKNKAKRQR 294
GS+ S G T+ SDE+ P E++ I + D Q+S P K KR R
Sbjct: 1245 GSQRSRKRGHTASESDEQQWPEEKRLKEDILENEDEQNS--PPKKGKRGR 1292
>AK026889-1|BAB15584.1| 125|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23236 fis, clone COL00725. ).
Length = 125
Score = 31.9 bits (69), Expect = 2.3
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1
Query: 145 GSKVSHVNGDTSPISDEKDKPSERQQSNSIDNDGDSQDSLKPKNKAKRQR 294
GS+ S G T+ SDE+ P E++ I + D Q+S P K KR R
Sbjct: 15 GSQRSRKRGHTASESDEQQWPEEKRLKEDILENEDEQNS--PPKKGKRGR 62
>AB023196-1|BAA76823.2| 1483|Homo sapiens KIAA0979 protein protein.
Length = 1483
Score = 31.9 bits (69), Expect = 2.3
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1
Query: 145 GSKVSHVNGDTSPISDEKDKPSERQQSNSIDNDGDSQDSLKPKNKAKRQR 294
GS+ S G T+ SDE+ P E++ I + D Q+S P K KR R
Sbjct: 1281 GSQRSRKRGHTASESDEQQWPEEKRLKEDILENEDEQNS--PPKKGKRGR 1328
>BC022003-1|AAH22003.1| 549|Homo sapiens myotubularin related
protein 9 protein.
Length = 549
Score = 29.9 bits (64), Expect = 9.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 293 RCRLALFFGFKESWESPSLSMLLDC 219
RC L+ + K+ WE+P + LDC
Sbjct: 379 RCALSAYCNTKQKWEAPVFLLFLDC 403
>BC012117-1|AAH12117.1| 291|Homo sapiens SDCCAG10 protein protein.
Length = 291
Score = 29.9 bits (64), Expect = 9.2
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +1
Query: 472 KSLSRDEVKENSLKLKIVGSKEKDNIVKNTEHIDNIENESEEIQKVAENAYNPSKSKYHP 651
K L +++ +E KLK G+K + E E E EE+ +V+++ SKS +
Sbjct: 80 KRLKKEKPEEEVKKLKPKGTKNFSLLSFGEE----AEEEEEEVNRVSQSMKGKSKSSHDL 135
Query: 652 IKD 660
+KD
Sbjct: 136 LKD 138
>AY358569-1|AAQ88932.1| 472|Homo sapiens SDCCAG10 protein.
Length = 472
Score = 29.9 bits (64), Expect = 9.2
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +1
Query: 472 KSLSRDEVKENSLKLKIVGSKEKDNIVKNTEHIDNIENESEEIQKVAENAYNPSKSKYHP 651
K L +++ +E KLK G+K + E E E EE+ +V+++ SKS +
Sbjct: 180 KRLKKEKPEEEVKKLKPKGTKNFSLLSFGEE----AEEEEEEVNRVSQSMKGKSKSSHDL 235
Query: 652 IKD 660
+KD
Sbjct: 236 LKD 238
>AL162056-1|CAB82395.1| 1254|Homo sapiens hypothetical protein
protein.
Length = 1254
Score = 29.9 bits (64), Expect = 9.2
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = -2
Query: 398 VLFTLLFKVIESSLSERSSFFTLTGDSDSLLELITRCRLALFFGFKESWESPSLSMLLDC 219
+LFT L KVIESS SF + + ++I C L+ F + W S ++
Sbjct: 284 LLFTELAKVIESSAKGFPSFISDMLSKCKVQKVILHCLLSSIFS-AQKWHSEKMAGKNLV 342
Query: 218 CLSEGLSFSS 189
+ EG S S
Sbjct: 343 AVEEGFSEDS 352
>AL139333-5|CAI15284.1| 2369|Homo sapiens dopey family member 1
protein.
Length = 2369
Score = 29.9 bits (64), Expect = 9.2
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = -2
Query: 398 VLFTLLFKVIESSLSERSSFFTLTGDSDSLLELITRCRLALFFGFKESWESPSLSMLLDC 219
+LFT L KVIESS SF + + ++I C L+ F + W S ++
Sbjct: 1476 LLFTELAKVIESSAKGFPSFISDMLSKCKVQKVILHCLLSSIFS-AQKWHSEKMAGKNLV 1534
Query: 218 CLSEGLSFSS 189
+ EG S S
Sbjct: 1535 AVEEGFSEDS 1544
>AL139333-4|CAM21599.1| 2465|Homo sapiens dopey family member 1
protein.
Length = 2465
Score = 29.9 bits (64), Expect = 9.2
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = -2
Query: 398 VLFTLLFKVIESSLSERSSFFTLTGDSDSLLELITRCRLALFFGFKESWESPSLSMLLDC 219
+LFT L KVIESS SF + + ++I C L+ F + W S ++
Sbjct: 1495 LLFTELAKVIESSAKGFPSFISDMLSKCKVQKVILHCLLSSIFS-AQKWHSEKMAGKNLV 1553
Query: 218 CLSEGLSFSS 189
+ EG S S
Sbjct: 1554 AVEEGFSEDS 1563
>AL121716-2|CAI42426.1| 2369|Homo sapiens dopey family member 1
protein.
Length = 2369
Score = 29.9 bits (64), Expect = 9.2
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = -2
Query: 398 VLFTLLFKVIESSLSERSSFFTLTGDSDSLLELITRCRLALFFGFKESWESPSLSMLLDC 219
+LFT L KVIESS SF + + ++I C L+ F + W S ++
Sbjct: 1476 LLFTELAKVIESSAKGFPSFISDMLSKCKVQKVILHCLLSSIFS-AQKWHSEKMAGKNLV 1534
Query: 218 CLSEGLSFSS 189
+ EG S S
Sbjct: 1535 AVEEGFSEDS 1544
>AL121716-1|CAI42425.2| 2465|Homo sapiens dopey family member 1
protein.
Length = 2465
Score = 29.9 bits (64), Expect = 9.2
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = -2
Query: 398 VLFTLLFKVIESSLSERSSFFTLTGDSDSLLELITRCRLALFFGFKESWESPSLSMLLDC 219
+LFT L KVIESS SF + + ++I C L+ F + W S ++
Sbjct: 1495 LLFTELAKVIESSAKGFPSFISDMLSKCKVQKVILHCLLSSIFS-AQKWHSEKMAGKNLV 1553
Query: 218 CLSEGLSFSS 189
+ EG S S
Sbjct: 1554 AVEEGFSEDS 1563
>AK027030-1|BAB15631.1| 1117|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23377 fis, clone HEP16237. ).
Length = 1117
Score = 29.9 bits (64), Expect = 9.2
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = -2
Query: 398 VLFTLLFKVIESSLSERSSFFTLTGDSDSLLELITRCRLALFFGFKESWESPSLSMLLDC 219
+LFT L KVIESS SF + + ++I C L+ F + W S ++
Sbjct: 147 LLFTELAKVIESSAKGFPSFISDMLSKCKVQKVILHCLLSSIFS-AQKWHSEKMAGKNLV 205
Query: 218 CLSEGLSFSS 189
+ EG S S
Sbjct: 206 AVEEGFSEDS 215
>AF039693-1|AAC18042.1| 332|Homo sapiens unknown protein protein.
Length = 332
Score = 29.9 bits (64), Expect = 9.2
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +1
Query: 472 KSLSRDEVKENSLKLKIVGSKEKDNIVKNTEHIDNIENESEEIQKVAENAYNPSKSKYHP 651
K L +++ +E KLK G+K + E E E EE+ +V+++ SKS +
Sbjct: 40 KRLKKEKPEEEVKKLKPKGTKNFSLLSFGEE----AEEEEEEVNRVSQSMKGKSKSSHDL 95
Query: 652 IKD 660
+KD
Sbjct: 96 LKD 98
>AF039692-1|AAC18041.1| 372|Homo sapiens antigen NY-CO-10 protein.
Length = 372
Score = 29.9 bits (64), Expect = 9.2
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +1
Query: 472 KSLSRDEVKENSLKLKIVGSKEKDNIVKNTEHIDNIENESEEIQKVAENAYNPSKSKYHP 651
K L +++ +E KLK G+K + E E E EE+ +V+++ SKS +
Sbjct: 80 KRLKKEKPEEEVKKLKPKGTKNFSLLSFGEE----AEEEEEEVNRVSQSMKGKSKSSHDL 135
Query: 652 IKD 660
+KD
Sbjct: 136 LKD 138
>AB029040-1|BAA83069.2| 1558|Homo sapiens KIAA1117 protein protein.
Length = 1558
Score = 29.9 bits (64), Expect = 9.2
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = -2
Query: 398 VLFTLLFKVIESSLSERSSFFTLTGDSDSLLELITRCRLALFFGFKESWESPSLSMLLDC 219
+LFT L KVIESS SF + + ++I C L+ F + W S ++
Sbjct: 588 LLFTELAKVIESSAKGFPSFISDMLSKCKVQKVILHCLLSSIFS-AQKWHSEKMAGKNLV 646
Query: 218 CLSEGLSFSS 189
+ EG S S
Sbjct: 647 AVEEGFSEDS 656
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.310 0.127 0.353
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,445,538
Number of Sequences: 237096
Number of extensions: 1788267
Number of successful extensions: 4210
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 4026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4210
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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