Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt29c22
(702 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT016103-1|AAV36988.1| 747|Drosophila melanogaster LD20955p pro... 39 0.008
AY051939-1|AAK93363.1| 720|Drosophila melanogaster LD41868p pro... 39 0.008
AE013599-3718|AAF47090.3| 747|Drosophila melanogaster CG5602-PA... 39 0.008
BT004494-1|AAO42658.1| 1113|Drosophila melanogaster GH24302p pro... 33 0.50
AY166585-1|AAN86032.1| 990|Drosophila melanogaster HAMLET protein. 33 0.50
AE014134-2973|AAF53703.3| 1108|Drosophila melanogaster CG31753-P... 33 0.50
AE014134-92|AAN10495.1| 713|Drosophila melanogaster CG31921-PA ... 32 0.66
AJ277789-1|CAB93525.1| 1738|Drosophila melanogaster mismatch dep... 31 2.0
AF132141-1|AAD33588.1| 1095|Drosophila melanogaster G/T mismatch... 31 2.0
AE014135-90|AAF59338.1| 1738|Drosophila melanogaster CG1981-PA p... 31 2.0
AE014298-2417|AAF48618.2| 639|Drosophila melanogaster CG9906-PA... 30 3.5
AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-P... 29 4.6
BT021418-1|AAX33566.1| 901|Drosophila melanogaster LD04461p pro... 29 6.1
AE014298-1652|AAF48069.1| 901|Drosophila melanogaster CG1703-PA... 29 6.1
AY118556-1|AAM49925.1| 708|Drosophila melanogaster LD36089p pro... 29 8.1
AY071453-1|AAL49075.1| 281|Drosophila melanogaster RE53636p pro... 29 8.1
AY071451-1|AAL49073.1| 281|Drosophila melanogaster RE53401p pro... 29 8.1
AF124745-1|AAD32859.1| 819|Drosophila melanogaster DNA replicat... 29 8.1
AE014298-725|AAF46023.1| 819|Drosophila melanogaster CG4206-PA ... 29 8.1
AE014297-2725|AAG22156.2| 980|Drosophila melanogaster CG4733-PA... 29 8.1
AE014297-615|AAO41511.1| 281|Drosophila melanogaster CG1142-PA ... 29 8.1
AE014296-764|AAG22245.1| 708|Drosophila melanogaster CG14991-PB... 29 8.1
AE014296-763|AAF47838.1| 708|Drosophila melanogaster CG14991-PA... 29 8.1
AB010107-1|BAA34731.1| 819|Drosophila melanogaster MCM3 protein. 29 8.1
>BT016103-1|AAV36988.1| 747|Drosophila melanogaster LD20955p
protein.
Length = 747
Score = 38.7 bits (86), Expect = 0.008
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +1
Query: 496 KENSLKLKIVGSKEKDNIVKNTEH-IDNIENESEEIQKVAENAYNPSKSKYHPIKDACWS 672
+E + +K V + K+ K T+ + I S K Y+PS YHP+K+A W
Sbjct: 61 EEKTSPVKNVKKEPKEVDDKTTDKKVTTIGLNSTAATKEDVENYDPSADSYHPLKNAYWK 120
Query: 673 KGDPVPYLAL 702
PYLAL
Sbjct: 121 DKKVTPYLAL 130
>AY051939-1|AAK93363.1| 720|Drosophila melanogaster LD41868p
protein.
Length = 720
Score = 38.7 bits (86), Expect = 0.008
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +1
Query: 496 KENSLKLKIVGSKEKDNIVKNTEH-IDNIENESEEIQKVAENAYNPSKSKYHPIKDACWS 672
+E + +K V + K+ K T+ + I S K Y+PS YHP+K+A W
Sbjct: 61 EEKTSPVKNVKKEPKEVDDKTTDKKVTTIGLNSTAATKEDVENYDPSADSYHPLKNAYWK 120
Query: 673 KGDPVPYLAL 702
PYLAL
Sbjct: 121 DKKVTPYLAL 130
>AE013599-3718|AAF47090.3| 747|Drosophila melanogaster CG5602-PA
protein.
Length = 747
Score = 38.7 bits (86), Expect = 0.008
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +1
Query: 496 KENSLKLKIVGSKEKDNIVKNTEH-IDNIENESEEIQKVAENAYNPSKSKYHPIKDACWS 672
+E + +K V + K+ K T+ + I S K Y+PS YHP+K+A W
Sbjct: 61 EEKTSPVKNVKKEPKEVDDKTTDKKVTTIGLNSTAATKEDVENYDPSADSYHPLKNAYWK 120
Query: 673 KGDPVPYLAL 702
PYLAL
Sbjct: 121 DKKVTPYLAL 130
>BT004494-1|AAO42658.1| 1113|Drosophila melanogaster GH24302p
protein.
Length = 1113
Score = 32.7 bits (71), Expect = 0.50
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 127 EIKSNGGSKVSHVNGDTSPISDEKDKPSERQ-QSNSIDNDGDSQDSLKPKNK 279
E KS + NG +S +S E K SE + ++NSI DGD + + +NK
Sbjct: 93 EKKSTLSKTQAESNGKSSSVSTESQKMSEEKVEANSIRKDGDLKTPKETENK 144
>AY166585-1|AAN86032.1| 990|Drosophila melanogaster HAMLET protein.
Length = 990
Score = 32.7 bits (71), Expect = 0.50
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +1
Query: 100 FKKTPFTPMEIKSNGGSKVSHVNGDTSPISDEKDKPSERQQSNSIDNDGDSQDSLKPKNK 279
F +TP + N G + N D ++ EKD + S++I N+ S + +K
Sbjct: 925 FMNRVYTPNSLAGNEGDTEEYPNSDDQSVNLEKDSGNFNNNSSNISNNNSSSGNNNNSSK 984
Query: 280 A 282
A
Sbjct: 985 A 985
>AE014134-2973|AAF53703.3| 1108|Drosophila melanogaster CG31753-PA
protein.
Length = 1108
Score = 32.7 bits (71), Expect = 0.50
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +1
Query: 100 FKKTPFTPMEIKSNGGSKVSHVNGDTSPISDEKDKPSERQQSNSIDNDGDSQDSLKPKNK 279
F +TP + N G + N D ++ EKD + S++I N+ S + +K
Sbjct: 1043 FMNRVYTPNSLAGNEGDTEEYPNSDDQSVNLEKDSGNFNNNSSNISNNNSSSGNNNNSSK 1102
Query: 280 A 282
A
Sbjct: 1103 A 1103
>AE014134-92|AAN10495.1| 713|Drosophila melanogaster CG31921-PA
protein.
Length = 713
Score = 32.3 bits (70), Expect = 0.66
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +1
Query: 133 KSNGGSKVSHVNGDTSPISDEKDKPSERQQSNSIDNDGDSQDSLKPKNKAK 285
K G K S GDT EKDK +++ +S DN+ + +D K K+K K
Sbjct: 368 KEKGRVKKSDDLGDT-----EKDKETDKSKSTGKDNEKNKEDKEKEKDKGK 413
>AJ277789-1|CAB93525.1| 1738|Drosophila melanogaster mismatch
depedent uracil/thymineDNA glycosylase protein.
Length = 1738
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 115 FTPMEIKSNGGSKVSHVNGDTSPISDEKDKPSERQQSNSID-NDGDSQDSLKPKNKAKRQ 291
F PM K K+ VN DTS ++ D+ ++ + D DG + KPK + K
Sbjct: 707 FKPMPKKRGRKKKLVAVNADTSQMTTPVDQ--QKVSAGRADCEDGGGDQAAKPKERKKHD 764
Query: 292 R 294
R
Sbjct: 765 R 765
>AF132141-1|AAD33588.1| 1095|Drosophila melanogaster G/T
mismatch-specific thymineDNA glycosylase protein.
Length = 1095
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 115 FTPMEIKSNGGSKVSHVNGDTSPISDEKDKPSERQQSNSID-NDGDSQDSLKPKNKAKRQ 291
F PM K K+ VN DTS ++ D+ ++ + D DG + KPK + K
Sbjct: 64 FKPMPKKRGRKKKLVAVNADTSQMTTPVDQ--QKVSAGRADCEDGGGDQAAKPKERKKHD 121
Query: 292 R 294
R
Sbjct: 122 R 122
>AE014135-90|AAF59338.1| 1738|Drosophila melanogaster CG1981-PA
protein.
Length = 1738
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 115 FTPMEIKSNGGSKVSHVNGDTSPISDEKDKPSERQQSNSID-NDGDSQDSLKPKNKAKRQ 291
F PM K K+ VN DTS ++ D+ ++ + D DG + KPK + K
Sbjct: 707 FKPMPKKRGRKKKLVAVNADTSQMTTPVDQ--QKVSAGRADCEDGGGDQAAKPKERKKHD 764
Query: 292 R 294
R
Sbjct: 765 R 765
>AE014298-2417|AAF48618.2| 639|Drosophila melanogaster CG9906-PA
protein.
Length = 639
Score = 29.9 bits (64), Expect = 3.5
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 169 GDTSPISDEKDKPSERQQSNSIDNDGDSQDSLKPKNKAKRQR 294
GDT+ S ++ Q + +DN+ D +D+LK K ++R
Sbjct: 591 GDTNKESTPLSASPKKNQKSYLDNNEDEEDTLKNKEPTPKKR 632
>AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-PB,
isoform B protein.
Length = 2133
Score = 29.5 bits (63), Expect = 4.6
Identities = 11/47 (23%), Positives = 23/47 (48%)
Frame = +1
Query: 118 TPMEIKSNGGSKVSHVNGDTSPISDEKDKPSERQQSNSIDNDGDSQD 258
T ++ K+ S ++ GD +P + ++ S + DND D ++
Sbjct: 1191 TKIKKKTTDSSSLNKAKGDENPKQESQESTSSESDQDDNDNDNDEEE 1237
>BT021418-1|AAX33566.1| 901|Drosophila melanogaster LD04461p
protein.
Length = 901
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 187 SDEKDKPSERQQSNSIDNDGDSQDSLKPKNKAKR 288
SDE +KP + +N +D++ D + L K AK+
Sbjct: 93 SDEDEKPEKSLPANDLDDEDDDEAPLASKPAAKK 126
>AE014298-1652|AAF48069.1| 901|Drosophila melanogaster CG1703-PA
protein.
Length = 901
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 187 SDEKDKPSERQQSNSIDNDGDSQDSLKPKNKAKR 288
SDE +KP + +N +D++ D + L K AK+
Sbjct: 93 SDEDEKPEKSLPANDLDDEDDDEAPLASKPAAKK 126
>AY118556-1|AAM49925.1| 708|Drosophila melanogaster LD36089p
protein.
Length = 708
Score = 28.7 bits (61), Expect = 8.1
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +2
Query: 53 FLKPVTTWLKGVSRH--SSRKLHLHLWK 130
FLKP LKG R+ + R LHLHL+K
Sbjct: 409 FLKPQRFTLKGYKRYFFTYRDLHLHLYK 436
>AY071453-1|AAL49075.1| 281|Drosophila melanogaster RE53636p
protein.
Length = 281
Score = 28.7 bits (61), Expect = 8.1
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +1
Query: 499 ENSLKLKIVGSKEKDNIVKNTEHIDNIENESEEIQKVAENAYNPSKSKYHPI 654
ENS K K+V K + + H+D + E K + A NP + H +
Sbjct: 95 ENSSKPKVVPRKRVTELNHDAPHLDLRQENLESNMKRTKQALNPGLEQAHAL 146
>AY071451-1|AAL49073.1| 281|Drosophila melanogaster RE53401p
protein.
Length = 281
Score = 28.7 bits (61), Expect = 8.1
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +1
Query: 499 ENSLKLKIVGSKEKDNIVKNTEHIDNIENESEEIQKVAENAYNPSKSKYHPI 654
ENS K K+V K + + H+D + E K + A NP + H +
Sbjct: 95 ENSSKPKVVPRKRVTELNHDAPHLDLRQENLESNMKRTKQALNPGLEQAHAL 146
>AF124745-1|AAD32859.1| 819|Drosophila melanogaster DNA replication
factor MCM3 protein.
Length = 819
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/37 (32%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Frame = +1
Query: 193 EKDKPSERQQ---SNSIDNDGDSQDSLKPKNKAKRQR 294
+KD+PS+R++ S++ D++G++ P ++KR R
Sbjct: 653 DKDRPSKRRRNSGSDAEDDNGEASSQRSPSRRSKRTR 689
>AE014298-725|AAF46023.1| 819|Drosophila melanogaster CG4206-PA
protein.
Length = 819
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/37 (32%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Frame = +1
Query: 193 EKDKPSERQQ---SNSIDNDGDSQDSLKPKNKAKRQR 294
+KD+PS+R++ S++ D++G++ P ++KR R
Sbjct: 653 DKDRPSKRRRNSGSDAEDDNGEASSQRSPSRRSKRTR 689
>AE014297-2725|AAG22156.2| 980|Drosophila melanogaster CG4733-PA
protein.
Length = 980
Score = 28.7 bits (61), Expect = 8.1
Identities = 21/77 (27%), Positives = 33/77 (42%)
Frame = +1
Query: 13 TVNTTSSKLKF*NIPETSHNMAQRSITSFFKKTPFTPMEIKSNGGSKVSHVNGDTSPISD 192
T TT++K K + ++ ++ ++TS K T T S SKVS G T+
Sbjct: 8 TTTTTTTKTKKLSSGTGTNMISSVAVTSAIKTTTTTRKPAGSGVSSKVSKAQGATNSTPA 67
Query: 193 EKDKPSERQQSNSIDND 243
D +E + ND
Sbjct: 68 SSDSNAEIAELTKKIND 84
>AE014297-615|AAO41511.1| 281|Drosophila melanogaster CG1142-PA
protein.
Length = 281
Score = 28.7 bits (61), Expect = 8.1
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +1
Query: 499 ENSLKLKIVGSKEKDNIVKNTEHIDNIENESEEIQKVAENAYNPSKSKYHPI 654
ENS K K+V K + + H+D + E K + A NP + H +
Sbjct: 95 ENSSKPKVVPRKRVTELNHDAPHLDLRQENLESNMKRTKQALNPGLEQAHAL 146
>AE014296-764|AAG22245.1| 708|Drosophila melanogaster CG14991-PB,
isoform B protein.
Length = 708
Score = 28.7 bits (61), Expect = 8.1
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +2
Query: 53 FLKPVTTWLKGVSRH--SSRKLHLHLWK 130
FLKP LKG R+ + R LHLHL+K
Sbjct: 409 FLKPQRFTLKGYKRYFFTYRDLHLHLYK 436
>AE014296-763|AAF47838.1| 708|Drosophila melanogaster CG14991-PA,
isoform A protein.
Length = 708
Score = 28.7 bits (61), Expect = 8.1
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +2
Query: 53 FLKPVTTWLKGVSRH--SSRKLHLHLWK 130
FLKP LKG R+ + R LHLHL+K
Sbjct: 409 FLKPQRFTLKGYKRYFFTYRDLHLHLYK 436
>AB010107-1|BAA34731.1| 819|Drosophila melanogaster MCM3 protein.
Length = 819
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/37 (32%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Frame = +1
Query: 193 EKDKPSERQQ---SNSIDNDGDSQDSLKPKNKAKRQR 294
+KD+PS+R++ S++ D++G++ P ++KR R
Sbjct: 653 DKDRPSKRRRNSGSDAEDDNGEASSQRSPSRRSKRTR 689
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.310 0.127 0.353
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,876,955
Number of Sequences: 53049
Number of extensions: 543735
Number of successful extensions: 1874
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1865
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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