Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt29c09
         (385 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding pr...    24   2.2  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   5.1  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       22   6.7  

>AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding
           protein AgamOBP52 protein.
          Length = 170

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -1

Query: 385 GTKLFERCYRRDVY 344
           GT+LFE CY++ +Y
Sbjct: 61  GTELFEVCYQQCIY 74


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 9/14 (64%), Positives = 10/14 (71%), Gaps = 2/14 (14%)
 Frame = +3

Query: 18  GQAC--CHPGHRHN 53
           GQ C  C PG+RHN
Sbjct: 701 GQFCESCAPGYRHN 714


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1

Query: 127 VSIDDQLFGAFNKVLDSHGYIDVVVNNAAVSLENSLEGIRRL 252
           V ID+      N     HG+   VV    VS   ++E IRR+
Sbjct: 854 VMIDEGFTFDANHPFHLHGHAFRVVGMDRVSRNTTIEDIRRM 895


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 381,908
Number of Sequences: 2352
Number of extensions: 6964
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29501847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)