Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt29c06
(808 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41110-4|AAA82419.1| 575|Caenorhabditis elegans Hypothetical pr... 32 0.003
Z75713-4|CAB00050.1| 603|Caenorhabditis elegans Hypothetical pr... 38 0.011
Z79598-2|CAB01864.1| 738|Caenorhabditis elegans Hypothetical pr... 37 0.015
Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical pr... 36 0.045
AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein... 36 0.045
U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 34 0.14
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 34 0.14
Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical p... 32 0.56
Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.56
Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical pr... 31 0.73
Z79598-1|CAB01867.3| 586|Caenorhabditis elegans Hypothetical pr... 31 0.97
Z35598-2|CAA84651.2| 656|Caenorhabditis elegans Hypothetical pr... 31 0.97
AF022977-1|ABF71715.1| 1285|Caenorhabditis elegans Peroxidasin (... 30 2.2
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 29 3.0
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z34802-6|CAB54282.1| 594|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z34802-5|CAA84337.1| 610|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z81467-3|CAC42255.1| 1143|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z81467-2|CAC42254.1| 1147|Caenorhabditis elegans Hypothetical pr... 29 5.2
AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein. 29 5.2
AF195611-1|AAF15530.1| 1147|Caenorhabditis elegans LIN-41B protein. 29 5.2
AF195610-1|AAF15529.1| 1143|Caenorhabditis elegans LIN-41A protein. 29 5.2
AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical ... 29 5.2
AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of... 28 9.0
AF022974-5|AAC48036.3| 347|Caenorhabditis elegans Seven tm rece... 28 9.0
AF016687-8|AAK72065.1| 737|Caenorhabditis elegans Hypothetical ... 28 9.0
AF016687-7|AAK72063.1| 881|Caenorhabditis elegans Hypothetical ... 28 9.0
>U41110-4|AAA82419.1| 575|Caenorhabditis elegans Hypothetical
protein ZK682.5 protein.
Length = 575
Score = 31.9 bits (69), Expect(2) = 0.003
Identities = 11/45 (24%), Positives = 26/45 (57%)
Frame = +2
Query: 470 QVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETFA 604
Q+ + + + + + + F G++DLY+++L N + ++ P FA
Sbjct: 331 QIQAIVLNKNRLSQVRADFFEGLNDLYSIDLQGNRIDNVQPLGFA 375
Score = 26.6 bits (56), Expect(2) = 0.003
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 680 FLNASSVQELDVSYCNMQYITANTFKN 760
F N ++ LD+SY +Q + +N F+N
Sbjct: 374 FANLPAISHLDISYNLLQTMPSNVFQN 400
>Z75713-4|CAB00050.1| 603|Caenorhabditis elegans Hypothetical
protein T01G9.3 protein.
Length = 603
Score = 37.5 bits (83), Expect = 0.011
Identities = 24/114 (21%), Positives = 47/114 (41%)
Frame = +2
Query: 461 GLHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETFAXXXXXXXXXXXX 640
G+ ++ + + ++ + + F + L +++LSNN + L T
Sbjct: 133 GMPKLRVLDLSSNHLNILPTGVFTYLRALRSLSLSNNTISDL--STNLLRGLNSLRVLRL 190
Query: 641 XXXXFPAAGSENYFLNASSVQELDVSYCNMQYITANTFKNMPGLMYLNVAGNNL 802
P F + S + EL +++CN+ I + +P L L + GNNL
Sbjct: 191 DRNPIPIEHINELFTDVSQLDELYLNHCNLSSIYSLALDRIPQLRQLGIGGNNL 244
>Z79598-2|CAB01864.1| 738|Caenorhabditis elegans Hypothetical
protein C44H4.2 protein.
Length = 738
Score = 37.1 bits (82), Expect = 0.015
Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 1/117 (0%)
Frame = +2
Query: 461 GLHQVATVKIVNSTIGYIAPNA-FHGVHDLYAVNLSNNNLKSLHPETFAXXXXXXXXXXX 637
GL + + + N++I I F ++ LY +NL +N + S+H TF
Sbjct: 97 GLPNLLRLDLSNNSIVEIQEQEIFPNLNKLYDINLGSNKIFSIHTSTFQNVKNSIQTINL 156
Query: 638 XXXXXFPAAGSENYFLNASSVQELDVSYCNMQYITANTFKNMPGLMYLNVAGNNLSD 808
A + +Q L + ++ + A F N+P L LN+AGN + +
Sbjct: 157 GHNNM--TAVPSSAIRGLKQLQSLHLHKNRIEQLDALNFLNLPVLNLLNLAGNQIHE 211
Score = 27.9 bits (59), Expect = 9.0
Identities = 24/115 (20%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Frame = +2
Query: 464 LHQVATVKIVNSTIGYIAPNAFHGV-HDLYAVNLSNNNLKSLHPETFAXXXXXXXXXXXX 640
L+++ + + ++ I I + F V + + +NL +NN+ ++ P + A
Sbjct: 123 LNKLYDINLGSNKIFSIHTSTFQNVKNSIQTINLGHNNMTAV-PSS-AIRGLKQLQSLHL 180
Query: 641 XXXXFPAAGSENYFLNASSVQELDVSYCNMQYITANTFKNMPGLMYLNVAGNNLS 805
+ N FLN + L+++ + + F N+P L YL ++GN ++
Sbjct: 181 HKNRIEQLDALN-FLNLPVLNLLNLAGNQIHELNRQAFLNVPSLRYLYLSGNKIT 234
>Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical
protein C44H4.3 protein.
Length = 680
Score = 35.5 bits (78), Expect = 0.045
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
Frame = +2
Query: 461 GLHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETFA--XXXXXXXXXX 634
GL + + + + I I AF + L VNL N + S+ +TFA
Sbjct: 130 GLRVLNILSLKCNKIENITTKAFVNMTSLIDVNLGCNQICSMAADTFANVKMSLQNLILD 189
Query: 635 XXXXXXFPAAGSENYFLNASSVQELDVSYCNMQYITANTFKNMPGLMYLNVAGNNLSD 808
FP+ N +++ L + Y + I N F N+ L L++ GNN+S+
Sbjct: 190 NNCMTEFPSKAVR----NMNNLIALHIKYNKINAIRQNDFVNLTSLSMLSLNGNNISE 243
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 671 ENYFLNASSVQELDVSYCNMQYITANTFKNMPGLMYLNVAGNNL 802
+N F+N +S+ L ++ N+ I +N P L YL + NNL
Sbjct: 222 QNDFVNLTSLSMLSLNGNNISEIKGGALQNTPNLHYLYLNENNL 265
>AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein
protein.
Length = 680
Score = 35.5 bits (78), Expect = 0.045
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
Frame = +2
Query: 461 GLHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETFA--XXXXXXXXXX 634
GL + + + + I I AF + L VNL N + S+ +TFA
Sbjct: 130 GLRVLNILSLKCNKIENITTKAFVNMTSLIDVNLGCNQICSMAADTFANVKMSLQNLILD 189
Query: 635 XXXXXXFPAAGSENYFLNASSVQELDVSYCNMQYITANTFKNMPGLMYLNVAGNNLSD 808
FP+ N +++ L + Y + I N F N+ L L++ GNN+S+
Sbjct: 190 NNCMTEFPSKAVR----NMNNLIALHIKYNKINAIRQNDFVNLTSLSMLSLNGNNISE 243
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 671 ENYFLNASSVQELDVSYCNMQYITANTFKNMPGLMYLNVAGNNL 802
+N F+N +S+ L ++ N+ I +N P L YL + NNL
Sbjct: 222 QNDFVNLTSLSMLSLNGNNISEIKGGALQNTPNLHYLYLNENNL 265
>U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical
protein C56E6.6 protein.
Length = 1102
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = +2
Query: 668 SENYFLNASSVQELDVSYCNMQYITANTFKNMPGLMYLNVAGNNL 802
S F + ++Q+L +S+ N++ IT+ TF N+ L YL+++ N +
Sbjct: 456 SSRSFSDLDNLQQLRLSHNNIRTITSMTFSNLRNLRYLDLSHNRI 500
Score = 29.1 bits (62), Expect = 3.9
Identities = 25/117 (21%), Positives = 50/117 (42%)
Frame = +2
Query: 446 MFKKLGLHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETFAXXXXXXX 625
MF ++ ++ + ++ I I+ +F + +L + LS+NN++++ TF+
Sbjct: 433 MFGSSSSSELKSLNLAHNKIHSISSRSFSDLDNLQQLRLSHNNIRTITSMTFS-NLRNLR 491
Query: 626 XXXXXXXXXFPAAGSENYFLNASSVQELDVSYCNMQYITANTFKNMPGLMYLNVAGN 796
S Y L A V LD + N+ I + F++ L L ++ N
Sbjct: 492 YLDLSHNRIIKILPSALYQLPALDVLHLD--HNNLNEIDRDAFRSFSDLQSLKLSHN 546
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 33.9 bits (74), Expect = 0.14
Identities = 27/113 (23%), Positives = 49/113 (43%)
Frame = +2
Query: 464 LHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETFAXXXXXXXXXXXXX 643
L + + + + I I P AF G+H+L+ + L NN+ L +TF
Sbjct: 310 LKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITDLKSDTFEGLGSLQLLLLNAN 369
Query: 644 XXXFPAAGSENYFLNASSVQELDVSYCNMQYITANTFKNMPGLMYLNVAGNNL 802
G+ F + + L + +++ I+ TF+N+ L L++A N L
Sbjct: 370 QLTCIRRGT---FDHVPKLSMLSLYDNDIKSISEVTFQNLTSLSTLHLAKNPL 419
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 33.9 bits (74), Expect = 0.14
Identities = 27/113 (23%), Positives = 49/113 (43%)
Frame = +2
Query: 464 LHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETFAXXXXXXXXXXXXX 643
L + + + + I I P AF G+H+L+ + L NN+ L +TF
Sbjct: 310 LKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITDLKSDTFEGLGSLQLLLLNAN 369
Query: 644 XXXFPAAGSENYFLNASSVQELDVSYCNMQYITANTFKNMPGLMYLNVAGNNL 802
G+ F + + L + +++ I+ TF+N+ L L++A N L
Sbjct: 370 QLTCIRRGT---FDHVPKLSMLSLYDNDIKSISEVTFQNLTSLSTLHLAKNPL 419
>Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical
protein T23G11.6a protein.
Length = 653
Score = 31.9 bits (69), Expect = 0.56
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 698 VQELDVSYCNMQYITANTFKNM-PGLMYLNVAGNNL 802
++ELD+S CN+ I NTF+N L LN+ N L
Sbjct: 400 LEELDLSKCNISNIVENTFENQKDSLKKLNLQKNKL 435
>Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical
protein T23G11.6b protein.
Length = 616
Score = 31.9 bits (69), Expect = 0.56
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 698 VQELDVSYCNMQYITANTFKNM-PGLMYLNVAGNNL 802
++ELD+S CN+ I NTF+N L LN+ N L
Sbjct: 400 LEELDLSKCNISNIVENTFENQKDSLKKLNLQKNKL 435
>Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical
protein K07A12.2 protein.
Length = 961
Score = 31.5 bits (68), Expect = 0.73
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Frame = +2
Query: 527 FHGVHDLYAVNLSNNNLKSLHPETF-AXXXXXXXXXXXXXXXXFPAAGSENYFLNASSVQ 703
F + L ++NL++N + S+ + F FP + + AS V
Sbjct: 122 FGNLSTLMSMNLNSNQISSIPDKAFNGLSALTQLRLENNAICDFPPKSLDA--VKASLVL 179
Query: 704 ELDVSYCNMQYITANTFKNMPGLMYLNVAGNNLSD 808
LDVS + I A +N LMYL++ NN+S+
Sbjct: 180 -LDVSGNCLDAIPAQILRNAANLMYLDLGSNNISE 213
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/108 (20%), Positives = 43/108 (39%)
Frame = +2
Query: 482 VKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETFAXXXXXXXXXXXXXXXXFPA 661
+ + N+ I I+ N+F + L + + NN+L + F
Sbjct: 322 ISVQNNNIVQISRNSFESLDKLVVLLVGNNSLAKIERGMFDGMKNLQQLSIRNNTLTALD 381
Query: 662 AGSENYFLNASSVQELDVSYCNMQYITANTFKNMPGLMYLNVAGNNLS 805
A S F + + LD+ + + I TF + L +L+++ N +S
Sbjct: 382 ASS---FAQLAHLTTLDLGHNKIHDIEEGTFDKLSKLFWLDLSNNKIS 426
>Z79598-1|CAB01867.3| 586|Caenorhabditis elegans Hypothetical
protein C44H4.1 protein.
Length = 586
Score = 31.1 bits (67), Expect = 0.97
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 464 LHQVATVKIVNSTIGYIAPNAFHGVHD---LYAVNLSNNNLKSLHP 592
L Q+ + + ++ I Y+ NAF H L ++LS NNL ++HP
Sbjct: 131 LKQLKILSLPDNLIEYVQDNAFLSYHSRDSLLKLDLSANNLTAIHP 176
>Z35598-2|CAA84651.2| 656|Caenorhabditis elegans Hypothetical
protein F10F2.4 protein.
Length = 656
Score = 31.1 bits (67), Expect = 0.97
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +2
Query: 677 YFLNASSVQELDVSYCNMQYITANTFKNMPGLMYLNVAGNNL 802
+FL +++ L +S C M I +TF +PGL ++++ N+L
Sbjct: 66 HFLFHPNLRVLRMSRCGMHEIPGSTFLPLPGLEVIDLSNNHL 107
>AF022977-1|ABF71715.1| 1285|Caenorhabditis elegans Peroxidasin
(drosophila peroxidase)homolog protein 1 protein.
Length = 1285
Score = 29.9 bits (64), Expect = 2.2
Identities = 33/168 (19%), Positives = 64/168 (38%)
Frame = +2
Query: 293 CPRDCICSVSQGYRQAKCSFLEIGTQKFGDDILDLVVENADPRYPINLDDFMFKKLGLHQ 472
CP +C C S L + ++ LV+ N + + + D G +Q
Sbjct: 23 CPVECTCDKKGLVVDCSSSGLTRIPKNISRNVRSLVIRN-NRIHKLKRSDLE----GFNQ 77
Query: 473 VATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETFAXXXXXXXXXXXXXXXX 652
+ T+ + ++ I I N + +L ++L++N L + P +
Sbjct: 78 LETLVLTHNKIKIIEENVLDHLPELKRLSLAHNELVYI-PPLCSDSRPLASLNLKRNHIQ 136
Query: 653 FPAAGSENYFLNASSVQELDVSYCNMQYITANTFKNMPGLMYLNVAGN 796
F YF + +LD S+ +Q + F N+P L + ++ N
Sbjct: 137 FIDEQVLRYF---PDLTQLDFSHNRIQSLRTKLFDNLPALSHAHLHSN 181
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +2
Query: 374 FGDDILDLVVENADPRYPI-NLDDFMFKKLGLHQVATVKIV-NSTIGYIAPNAFHGVHDL 547
FG L+ E PR+ I ++ MF++ +K + NS + Y+A N FH +
Sbjct: 2091 FGQTPSQLLTEAHPPRHSIMSMAPTMFRRHDEDLCMMMKYISNSPVVYLAANTFHQLPQP 2150
Query: 548 YAVNLSNNNLKSLH 589
V ++ N + SL+
Sbjct: 2151 TVVGVAQNLVFSLN 2164
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
F10F2.1 protein.
Length = 2507
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +2
Query: 374 FGDDILDLVVENADPRYPI-NLDDFMFKKLGLHQVATVKIV-NSTIGYIAPNAFHGVHDL 547
FG L+ E PR+ I ++ MF++ +K + NS + Y+A N FH +
Sbjct: 2091 FGQTPSQLLTEAHPPRHSIMSMAPTMFRRHDEDLCMMMKYISNSPVVYLAANTFHQLPQP 2150
Query: 548 YAVNLSNNNLKSLH 589
V ++ N + SL+
Sbjct: 2151 TVVGVAQNLVFSLN 2164
>Z34802-6|CAB54282.1| 594|Caenorhabditis elegans Hypothetical
protein M88.6b protein.
Length = 594
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 461 GLHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSL 586
G+ + + + N + I AF G++ L + LSNNNL+++
Sbjct: 197 GMKNLKKLTLQNCNLEIIQKGAFRGLNSLEQLILSNNNLENI 238
>Z34802-5|CAA84337.1| 610|Caenorhabditis elegans Hypothetical
protein M88.6a protein.
Length = 610
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 461 GLHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSL 586
G+ + + + N + I AF G++ L + LSNNNL+++
Sbjct: 197 GMKNLKKLTLQNCNLEIIQKGAFRGLNSLEQLILSNNNLENI 238
>Z81467-3|CAC42255.1| 1143|Caenorhabditis elegans Hypothetical
protein C12C8.3b protein.
Length = 1143
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/29 (55%), Positives = 16/29 (55%)
Frame = +1
Query: 520 QCFPWCP*PLRSQPIQQQPKEPSS*DVCE 606
Q FP P PL SQP QQQP P CE
Sbjct: 348 QTFP-IPSPLGSQPQQQQPMGPIQCQGCE 375
>Z81467-2|CAC42254.1| 1147|Caenorhabditis elegans Hypothetical
protein C12C8.3a protein.
Length = 1147
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/29 (55%), Positives = 16/29 (55%)
Frame = +1
Query: 520 QCFPWCP*PLRSQPIQQQPKEPSS*DVCE 606
Q FP P PL SQP QQQP P CE
Sbjct: 348 QTFP-IPSPLGSQPQQQQPMGPIQCQGCE 375
>AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein.
Length = 542
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 482 VKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHP 592
+ I +S + +I P+AF+ + L ++LSNN L+ + P
Sbjct: 314 LSISSSALTHIHPSAFNPIPPLSHLDLSNNELRYVAP 350
>AF195611-1|AAF15530.1| 1147|Caenorhabditis elegans LIN-41B protein.
Length = 1147
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/29 (55%), Positives = 16/29 (55%)
Frame = +1
Query: 520 QCFPWCP*PLRSQPIQQQPKEPSS*DVCE 606
Q FP P PL SQP QQQP P CE
Sbjct: 348 QTFP-IPSPLGSQPQQQQPMGPIQCQGCE 375
>AF195610-1|AAF15529.1| 1143|Caenorhabditis elegans LIN-41A protein.
Length = 1143
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/29 (55%), Positives = 16/29 (55%)
Frame = +1
Query: 520 QCFPWCP*PLRSQPIQQQPKEPSS*DVCE 606
Q FP P PL SQP QQQP P CE
Sbjct: 348 QTFP-IPSPLGSQPQQQQPMGPIQCQGCE 375
>AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical
protein Y71F9B.8 protein.
Length = 542
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 482 VKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHP 592
+ I +S + +I P+AF+ + L ++LSNN L+ + P
Sbjct: 314 LSISSSALTHIHPSAFNPIPPLSHLDLSNNELRYVAP 350
>AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of
constitutive dauerformation protein 2 protein.
Length = 1446
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 469 PGCYCKNREQHDWLYRPQCFPWCP 540
P CYC RE+H L + +C W P
Sbjct: 153 PDCYCGKREKHCDLSKEKCH-WTP 175
>AF022974-5|AAC48036.3| 347|Caenorhabditis elegans Seven tm
receptor protein 208 protein.
Length = 347
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = -1
Query: 409 VFDHEIKDIIAELLCTDFEEAALGLSVSLRYRAYAVSGTGPVLVVQNLLVF 257
+ +++ ++ L C F + SV YR +AVSG + + + +F
Sbjct: 83 LLSYDVLLLLVSLCCAFFGSLMVMFSVQFIYRFWAVSGNNSIKTFEGVRIF 133
>AF016687-8|AAK72065.1| 737|Caenorhabditis elegans Hypothetical
protein T21D12.9c protein.
Length = 737
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 698 VQELDVSYCNMQYITANTFKNMPGLMYLNVAGNNLS 805
+Q LD+S +++I F N+P L LN+ N L+
Sbjct: 78 LQTLDISNNIIRHIDFEFFYNLPNLKILNIRKNRLA 113
>AF016687-7|AAK72063.1| 881|Caenorhabditis elegans Hypothetical
protein T21D12.9a protein.
Length = 881
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 698 VQELDVSYCNMQYITANTFKNMPGLMYLNVAGNNLS 805
+Q LD+S +++I F N+P L LN+ N L+
Sbjct: 78 LQTLDISNNIIRHIDFEFFYNLPNLKILNIRKNRLA 113
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,966,512
Number of Sequences: 27780
Number of extensions: 376517
Number of successful extensions: 1165
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1163
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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