Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt29c05
         (711 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095012-1|AAM11340.1|  233|Drosophila melanogaster GH22341p pro...   205   4e-53
AE014297-3427|AAF56215.1|  233|Drosophila melanogaster CG13603-P...   205   4e-53
AY113429-1|AAM29434.1|  112|Drosophila melanogaster RE23864p pro...    35   0.13 
AE014134-1484|AAF52660.1|  112|Drosophila melanogaster CG13393-P...    35   0.13 
AY121620-1|AAM51947.1| 1353|Drosophila melanogaster GH06739p pro...    33   0.51 
AE013599-2803|AAF57611.2| 1353|Drosophila melanogaster CG15105-P...    33   0.51 
AE013599-2802|AAF57612.2| 1353|Drosophila melanogaster CG15105-P...    33   0.51 
AE014298-1643|AAF48063.1|  544|Drosophila melanogaster CG11695-P...    31   1.2  
AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB...    31   1.5  
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P...    31   1.5  
AY128463-1|AAM75056.1|  817|Drosophila melanogaster RE18773p pro...    31   2.0  
AE014296-277|AAS64930.1|  817|Drosophila melanogaster CG7852-PC,...    31   2.0  
AE014296-276|AAN11487.1| 1449|Drosophila melanogaster CG7852-PB,...    31   2.0  
AE014296-275|AAF47507.1| 1449|Drosophila melanogaster CG7852-PA,...    31   2.0  
U31368-1|AAA92297.1| 2527|Drosophila melanogaster transcription ...    29   6.2  
L42311-1|AAA98814.1| 2529|Drosophila melanogaster zinc finger pr...    29   6.2  
AE013599-1219|AAF58712.1| 2532|Drosophila melanogaster CG7734-PC...    29   6.2  
AE013599-1218|AAF58713.1| 2532|Drosophila melanogaster CG7734-PB...    29   6.2  
AE013599-1217|AAM68718.1| 2532|Drosophila melanogaster CG7734-PA...    29   6.2  
AE013599-1216|AAS64914.1| 2577|Drosophila melanogaster CG7734-PD...    29   6.2  

>AY095012-1|AAM11340.1|  233|Drosophila melanogaster GH22341p
           protein.
          Length = 233

 Score =  205 bits (501), Expect = 4e-53
 Identities = 97/205 (47%), Positives = 146/205 (71%), Gaps = 4/205 (1%)
 Frame = +3

Query: 105 MALTNVLLLSQIAGYLMGLILSLCVIVPMSMHQDEFSGNCLLFSKGVW-QEDGQLLVSWA 281
           MAL NVL LSQIAG+++  ILSLC++VP+ ++ D+F G+CLLF+ G W +EDG   V WA
Sbjct: 1   MALANVLQLSQIAGHVILFILSLCIVVPLFINLDQFCGHCLLFTTGKWREEDGMFDVQWA 60

Query: 282 SRFYCNYVILVGILMFLVCCVQIYRLSMLVYKGEDSSFLSAFLEAVGCTVLCGLGVSAAL 461
           S  +CN+ ++ G  + ++  VQIYR + +    E++SF++ F++ V    +  + + +A+
Sbjct: 61  SNGFCNFPLITGFFLLIISVVQIYRYARMK---EEASFIALFIDVVLGIWMLAMSILSAI 117

Query: 462 MVTLGFMTWCDNIIERFPSCEDATGQDI---DTKDKISTVGFYMEIGTAQFGAWAAFATW 632
            +TLGF+ WCD++ ERFPSC  + GQ+I   DT +KI+T GFY+E+GT QFGAW +FA  
Sbjct: 118 FITLGFIVWCDSMTERFPSCAISAGQNIIHGDT-EKINTSGFYIEMGTTQFGAWGSFAIS 176

Query: 633 VGLAVFSTLKVCRYHQLQNIQVSMY 707
           VG+AV + LK+   HQ++NI+VSMY
Sbjct: 177 VGIAVIALLKLIDNHQVRNIKVSMY 201


>AE014297-3427|AAF56215.1|  233|Drosophila melanogaster CG13603-PA
           protein.
          Length = 233

 Score =  205 bits (501), Expect = 4e-53
 Identities = 97/205 (47%), Positives = 146/205 (71%), Gaps = 4/205 (1%)
 Frame = +3

Query: 105 MALTNVLLLSQIAGYLMGLILSLCVIVPMSMHQDEFSGNCLLFSKGVW-QEDGQLLVSWA 281
           MAL NVL LSQIAG+++  ILSLC++VP+ ++ D+F G+CLLF+ G W +EDG   V WA
Sbjct: 1   MALANVLQLSQIAGHVILFILSLCIVVPLFINLDQFCGHCLLFTTGKWREEDGMFDVQWA 60

Query: 282 SRFYCNYVILVGILMFLVCCVQIYRLSMLVYKGEDSSFLSAFLEAVGCTVLCGLGVSAAL 461
           S  +CN+ ++ G  + ++  VQIYR + +    E++SF++ F++ V    +  + + +A+
Sbjct: 61  SNGFCNFPLITGFFLLIISVVQIYRYARMK---EEASFIALFIDVVLGIWMLAMSILSAI 117

Query: 462 MVTLGFMTWCDNIIERFPSCEDATGQDI---DTKDKISTVGFYMEIGTAQFGAWAAFATW 632
            +TLGF+ WCD++ ERFPSC  + GQ+I   DT +KI+T GFY+E+GT QFGAW +FA  
Sbjct: 118 FITLGFIVWCDSMTERFPSCAISAGQNIIHGDT-EKINTSGFYIEMGTTQFGAWGSFAIS 176

Query: 633 VGLAVFSTLKVCRYHQLQNIQVSMY 707
           VG+AV + LK+   HQ++NI+VSMY
Sbjct: 177 VGIAVIALLKLIDNHQVRNIKVSMY 201


>AY113429-1|AAM29434.1|  112|Drosophila melanogaster RE23864p
           protein.
          Length = 112

 Score = 34.7 bits (76), Expect = 0.13
 Identities = 19/48 (39%), Positives = 25/48 (52%)
 Frame = +3

Query: 291 YCNYVILVGILMFLVCCVQIYRLSMLVYKGEDSSFLSAFLEAVGCTVL 434
           Y  Y++L GI+ F+ CC        LV     +SFLS F+  V C VL
Sbjct: 29  YLGYILLTGIIQFVYCC--------LVGTFPFNSFLSGFISTVSCFVL 68


>AE014134-1484|AAF52660.1|  112|Drosophila melanogaster CG13393-PA
           protein.
          Length = 112

 Score = 34.7 bits (76), Expect = 0.13
 Identities = 19/48 (39%), Positives = 25/48 (52%)
 Frame = +3

Query: 291 YCNYVILVGILMFLVCCVQIYRLSMLVYKGEDSSFLSAFLEAVGCTVL 434
           Y  Y++L GI+ F+ CC        LV     +SFLS F+  V C VL
Sbjct: 29  YLGYILLTGIIQFVYCC--------LVGTFPFNSFLSGFISTVSCFVL 68


>AY121620-1|AAM51947.1| 1353|Drosophila melanogaster GH06739p
           protein.
          Length = 1353

 Score = 32.7 bits (71), Expect = 0.51
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -2

Query: 515 RKPFNDVITPSHKTESNHQGSRDSKPAEHSTSN 417
           +KPF     P H T S   GS D K AE S+S+
Sbjct: 653 KKPFVSRFLPQHSTASTTNGSADKKKAESSSSS 685


>AE013599-2803|AAF57611.2| 1353|Drosophila melanogaster CG15105-PB,
           isoform B protein.
          Length = 1353

 Score = 32.7 bits (71), Expect = 0.51
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -2

Query: 515 RKPFNDVITPSHKTESNHQGSRDSKPAEHSTSN 417
           +KPF     P H T S   GS D K AE S+S+
Sbjct: 653 KKPFVSRFLPQHSTASTTNGSADKKKAESSSSS 685


>AE013599-2802|AAF57612.2| 1353|Drosophila melanogaster CG15105-PA,
           isoform A protein.
          Length = 1353

 Score = 32.7 bits (71), Expect = 0.51
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -2

Query: 515 RKPFNDVITPSHKTESNHQGSRDSKPAEHSTSN 417
           +KPF     P H T S   GS D K AE S+S+
Sbjct: 653 KKPFVSRFLPQHSTASTTNGSADKKKAESSSSS 685


>AE014298-1643|AAF48063.1|  544|Drosophila melanogaster CG11695-PA
           protein.
          Length = 544

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 21/76 (27%), Positives = 32/76 (42%)
 Frame = -3

Query: 532 VASSQLGNRSMMLSHQVIKPRVTIRAAETPSPQSTVHPTASKNADRNELSSPLYTNIESL 353
           V   QLG + + +           +A     P+  V P A+ N + NE+     +N  S 
Sbjct: 71  VMKKQLGLQQLKMEPFSEDEDADTKAQILCEPEIDVSPAAADNEECNEIDGDASSNSRSS 130

Query: 352 YI*TQHTRNMRIPTRI 305
            I T   R MR+P+ I
Sbjct: 131 SIRTTSLREMRLPSPI 146


>AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB,
            isoform B protein.
          Length = 7744

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 483  TWCDNIIERFPSCEDATGQDIDTKDKISTVG 575
            TW  N   +   C+DA G+  D K KI T+G
Sbjct: 3231 TWISNEKAKLLECDDAYGEKADIKRKIETLG 3261


>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
            isoform D protein.
          Length = 11707

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 483  TWCDNIIERFPSCEDATGQDIDTKDKISTVG 575
            TW  N   +   C+DA G+  D K KI T+G
Sbjct: 3231 TWISNEKAKLLECDDAYGEKADIKRKIETLG 3261


>AY128463-1|AAM75056.1|  817|Drosophila melanogaster RE18773p
           protein.
          Length = 817

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 681 AGGNDTLSVLKIQPDPPMSRMLPMHQTVLFQSPYKNQ 571
           + G  T S+ +++ D P+SR LP H  V  Q+P   Q
Sbjct: 195 SNGQQTHSLSRVKQDGPVSRSLPRHFKVAGQAPQSAQ 231


>AE014296-277|AAS64930.1|  817|Drosophila melanogaster CG7852-PC,
           isoform C protein.
          Length = 817

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 681 AGGNDTLSVLKIQPDPPMSRMLPMHQTVLFQSPYKNQ 571
           + G  T S+ +++ D P+SR LP H  V  Q+P   Q
Sbjct: 195 SNGQQTHSLSRVKQDGPVSRSLPRHFKVAGQAPQSAQ 231


>AE014296-276|AAN11487.1| 1449|Drosophila melanogaster CG7852-PB,
           isoform B protein.
          Length = 1449

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 681 AGGNDTLSVLKIQPDPPMSRMLPMHQTVLFQSPYKNQ 571
           + G  T S+ +++ D P+SR LP H  V  Q+P   Q
Sbjct: 195 SNGQQTHSLSRVKQDGPVSRSLPRHFKVAGQAPQSAQ 231


>AE014296-275|AAF47507.1| 1449|Drosophila melanogaster CG7852-PA,
           isoform A protein.
          Length = 1449

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 681 AGGNDTLSVLKIQPDPPMSRMLPMHQTVLFQSPYKNQ 571
           + G  T S+ +++ D P+SR LP H  V  Q+P   Q
Sbjct: 195 SNGQQTHSLSRVKQDGPVSRSLPRHFKVAGQAPQSAQ 231


>U31368-1|AAA92297.1| 2527|Drosophila melanogaster transcription
           factor protein.
          Length = 2527

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -1

Query: 447 LQARRAQYIQQPPRMPTEMSYPPLCTP 367
           L A ++ YIQQPP +PT M   PL +P
Sbjct: 539 LSAAKSAYIQQPP-LPTYMQQLPLGSP 564


>L42311-1|AAA98814.1| 2529|Drosophila melanogaster zinc finger
           protein protein.
          Length = 2529

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -1

Query: 447 LQARRAQYIQQPPRMPTEMSYPPLCTP 367
           L A ++ YIQQPP +PT M   PL +P
Sbjct: 543 LSAAKSAYIQQPP-LPTYMQQLPLGSP 568


>AE013599-1219|AAF58712.1| 2532|Drosophila melanogaster CG7734-PC,
           isoform C protein.
          Length = 2532

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -1

Query: 447 LQARRAQYIQQPPRMPTEMSYPPLCTP 367
           L A ++ YIQQPP +PT M   PL +P
Sbjct: 544 LSAAKSAYIQQPP-LPTYMQQLPLGSP 569


>AE013599-1218|AAF58713.1| 2532|Drosophila melanogaster CG7734-PB,
           isoform B protein.
          Length = 2532

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -1

Query: 447 LQARRAQYIQQPPRMPTEMSYPPLCTP 367
           L A ++ YIQQPP +PT M   PL +P
Sbjct: 544 LSAAKSAYIQQPP-LPTYMQQLPLGSP 569


>AE013599-1217|AAM68718.1| 2532|Drosophila melanogaster CG7734-PA,
           isoform A protein.
          Length = 2532

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -1

Query: 447 LQARRAQYIQQPPRMPTEMSYPPLCTP 367
           L A ++ YIQQPP +PT M   PL +P
Sbjct: 544 LSAAKSAYIQQPP-LPTYMQQLPLGSP 569


>AE013599-1216|AAS64914.1| 2577|Drosophila melanogaster CG7734-PD,
           isoform D protein.
          Length = 2577

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -1

Query: 447 LQARRAQYIQQPPRMPTEMSYPPLCTP 367
           L A ++ YIQQPP +PT M   PL +P
Sbjct: 589 LSAAKSAYIQQPP-LPTYMQQLPLGSP 614


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,285,764
Number of Sequences: 53049
Number of extensions: 813535
Number of successful extensions: 2708
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2700
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)