Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt29b23
         (731 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    24   4.2  
AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     24   5.6  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   9.7  

>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 17/61 (27%), Positives = 25/61 (40%)
 Frame = +3

Query: 447 ALIRTFAANITRLSLSVPALQQAIVSGKYDAVVTESFFNDAEAGYGAVLQVPWILLSSVS 626
           +LI   A    +L      L  +IV     AVV    F     GYG V  +P ++++   
Sbjct: 275 SLIAVCARFFLQLPWMWSILLGSIVGAVSPAVVVPRLFRLRTKGYGVVKGIPTLIIAVAG 334

Query: 627 I 629
           I
Sbjct: 335 I 335


>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 504 LQQAIVSGKYDAVVT 548
           LQ A+++G YD +VT
Sbjct: 263 LQAAVIAGSYDEIVT 277


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -2

Query: 223  ARADVTTHTKKSSNWRHLMSEQFQCTIE 140
            AR +++ H K S+ W  + +E  + T E
Sbjct: 1010 ARQEMSKHRKGSAEWNKINNEAHKTTRE 1037


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 774,028
Number of Sequences: 2352
Number of extensions: 15704
Number of successful extensions: 37
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)