Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt29b23
(731 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF022972-7|AAM29671.1| 124|Caenorhabditis elegans Hypothetical ... 34 0.090
AF022972-3|AAC48235.2| 526|Caenorhabditis elegans Udp-glucurono... 33 0.16
AF022972-10|AAC48233.2| 523|Caenorhabditis elegans Udp-glucuron... 32 0.36
AF026215-2|AAB71324.2| 533|Caenorhabditis elegans Udp-glucurono... 31 0.64
AF022972-4|AAC48236.2| 528|Caenorhabditis elegans Udp-glucurono... 31 0.64
Z73974-8|CAA98274.2| 526|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z73905-7|CAA98112.2| 526|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z72502-15|CAN86590.1| 540|Caenorhabditis elegans Hypothetical p... 31 1.1
Z72502-14|CAA96584.2| 536|Caenorhabditis elegans Hypothetical p... 31 1.1
Z75553-5|CAA99950.2| 533|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z75529-1|CAA99782.1| 534|Caenorhabditis elegans Hypothetical pr... 30 1.5
AL032635-5|CAB63375.1| 260|Caenorhabditis elegans Hypothetical ... 30 1.5
U88311-5|AAB42343.1| 531|Caenorhabditis elegans Udp-glucuronosy... 30 1.9
Z75554-4|CAA99957.2| 534|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z71185-2|CAA94904.2| 522|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z71177-8|CAA94866.2| 525|Caenorhabditis elegans Hypothetical pr... 29 2.6
U88311-3|AAB42345.1| 526|Caenorhabditis elegans Udp-glucuronosy... 29 2.6
AF022972-5|AAC48237.1| 523|Caenorhabditis elegans Udp-glucurono... 29 2.6
Z82260-2|CAB05130.1| 344|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z70782-8|CAA94845.2| 536|Caenorhabditis elegans Hypothetical pr... 29 3.4
U41995-8|AAN84829.1| 350|Caenorhabditis elegans Hypothetical pr... 29 3.4
U41995-7|AAP68946.1| 405|Caenorhabditis elegans Hypothetical pr... 29 3.4
U28943-11|AAK68295.1| 319|Caenorhabditis elegans Hypothetical p... 29 3.4
AF100663-3|AAC68980.1| 529|Caenorhabditis elegans Udp-glucurono... 29 3.4
U97003-1|AAB52270.2| 527|Caenorhabditis elegans Udp-glucuronosy... 29 4.5
U61948-8|AAB03147.2| 782|Caenorhabditis elegans Human hcf1 rela... 29 4.5
U40959-5|AAA81769.1| 531|Caenorhabditis elegans Udp-glucuronosy... 29 4.5
AF072907-1|AAD12580.1| 782|Caenorhabditis elegans host cell fac... 29 4.5
AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPas... 28 5.9
AF016440-8|ABD94107.1| 286|Caenorhabditis elegans Dehydrogenase... 28 5.9
AF016440-7|AAB65901.2| 317|Caenorhabditis elegans Dehydrogenase... 28 5.9
AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane cal... 28 5.9
Z81111-2|CAB03266.1| 535|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z75554-10|CAA99956.1| 535|Caenorhabditis elegans Hypothetical p... 28 7.8
>AF022972-7|AAM29671.1| 124|Caenorhabditis elegans Hypothetical
protein F10D2.8 protein.
Length = 124
Score = 34.3 bits (75), Expect = 0.090
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +3
Query: 213 SARAYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATP 335
S +Y+ L P+ SH I DAL AGH VT+ TP
Sbjct: 13 STYSYNFLVFCPLFGHSHTKFFATIADALTDAGHNVTFFTP 53
>AF022972-3|AAC48235.2| 526|Caenorhabditis elegans
Udp-glucuronosyltransferase protein40 protein.
Length = 526
Score = 33.5 bits (73), Expect = 0.16
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 17/137 (12%)
Frame = +3
Query: 210 TSARAYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATP--------FPPKESTKGL 365
+S +Y++L P+ SH++ + D L AGH VT +P + + TK +
Sbjct: 15 SSTTSYNILVFCPLFGHSHSTFFGRLADILTEAGHNVTLFSPTIIDEFRNYSYTKLTKDV 74
Query: 366 KIIDVS-ATASVSEMIDMN----DQRNADAGIALIRTFAANITRLSLSVPALQQAIVSG- 527
+D S ++ ++I N +Q + I F +ITR +V A A++ G
Sbjct: 75 AYLDPSPELKAIGDLIAGNKRWWNQEFSVFEIPQTTRFFKSITREQNNVLANNLALLDGL 134
Query: 528 ---KYDAVVTESFFNDA 569
K+D ++ ES F A
Sbjct: 135 KQKKFDLILFESVFTCA 151
>AF022972-10|AAC48233.2| 523|Caenorhabditis elegans
Udp-glucuronosyltransferase protein39, isoform a
protein.
Length = 523
Score = 32.3 bits (70), Expect = 0.36
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +3
Query: 222 AYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATPFPPKESTKGLKIIDVSATASVS 401
+++ L P+ + SH+ I D+L AGH VT+ TP T K +VS T S
Sbjct: 16 SFNFLVFCPLFAHSHSKFFATIADSLTDAGHNVTFFTP------TIVEKYRNVSYTKSTK 69
Query: 402 EMIDMNDQR 428
+++ M +
Sbjct: 70 DVVHMKPSK 78
>AF026215-2|AAB71324.2| 533|Caenorhabditis elegans
Udp-glucuronosyltransferase protein36 protein.
Length = 533
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 222 AYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATP 335
+Y+ L P+ SH + I D L AGH VT+ TP
Sbjct: 22 SYNFLVFCPLFGHSHTTFFAKIADTLTYAGHNVTFFTP 59
>AF022972-4|AAC48236.2| 528|Caenorhabditis elegans
Udp-glucuronosyltransferase protein37 protein.
Length = 528
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 222 AYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATP 335
+Y+ L P+ SH + I D L AGH VT+ TP
Sbjct: 16 SYNFLIFSPLFGHSHTTFFAKIADTLSEAGHNVTFFTP 53
>Z73974-8|CAA98274.2| 526|Caenorhabditis elegans Hypothetical
protein F29F11.2 protein.
Length = 526
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 222 AYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATPFPPKE 350
+Y+ L P+ + SH+ I D L AGH VT+ P +E
Sbjct: 22 SYNYLVFCPLFAHSHHKFLAKIADTLTEAGHNVTFLMPIIHRE 64
>Z73905-7|CAA98112.2| 526|Caenorhabditis elegans Hypothetical
protein F29F11.2 protein.
Length = 526
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 222 AYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATPFPPKE 350
+Y+ L P+ + SH+ I D L AGH VT+ P +E
Sbjct: 22 SYNYLVFCPLFAHSHHKFLAKIADTLTEAGHNVTFLMPIIHRE 64
>Z72502-15|CAN86590.1| 540|Caenorhabditis elegans Hypothetical
protein C08B6.1b protein.
Length = 540
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 216 ARAYHVLCVFPIPSRSH-NSLGKGIVDALLGAGHEVTWATP 335
+ +Y VL P SH N LGK I D L+ AGH+VT P
Sbjct: 18 SNSYKVLVFNPAFGASHSNFLGK-ISDILIDAGHDVTMLIP 57
>Z72502-14|CAA96584.2| 536|Caenorhabditis elegans Hypothetical
protein C08B6.1a protein.
Length = 536
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 216 ARAYHVLCVFPIPSRSH-NSLGKGIVDALLGAGHEVTWATP 335
+ +Y VL P SH N LGK I D L+ AGH+VT P
Sbjct: 18 SNSYKVLVFNPAFGASHSNFLGK-ISDILIDAGHDVTMLIP 57
>Z75553-5|CAA99950.2| 533|Caenorhabditis elegans Hypothetical
protein ZC443.5 protein.
Length = 533
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/42 (47%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 213 SARAYHVLCVFPIPSRSH-NSLGKGIVDALLGAGHEVTWATP 335
S Y VL P SH N LGK I D L+ AGH VT P
Sbjct: 14 STLTYKVLVFNPAYGASHSNFLGK-ISDILIDAGHNVTMLIP 54
>Z75529-1|CAA99782.1| 534|Caenorhabditis elegans Hypothetical
protein C44H9.1 protein.
Length = 534
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 222 AYHVLCVFPIPSRSH-NSLGKGIVDALLGAGHEVTWATP 335
+Y VL P SH N LGK I D L+ AGH+VT P
Sbjct: 17 SYKVLVFNPAFGASHSNFLGK-ISDILIDAGHDVTMLIP 54
>AL032635-5|CAB63375.1| 260|Caenorhabditis elegans Hypothetical
protein Y51A2A.7 protein.
Length = 260
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -1
Query: 644 FQVGHYGDAGQQDPGHLKYCPVARLGIVEEGLRDDRVV 531
F +GH+ D +D GH+ VA G VE G+ +D V+
Sbjct: 61 FHIGHHSDHDNEDNGHIYQGGVAN-GAVEGGVINDGVL 97
>U88311-5|AAB42343.1| 531|Caenorhabditis elegans
Udp-glucuronosyltransferase protein25 protein.
Length = 531
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 213 SARAYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATPFPPKESTKG 362
+ A+++L P SH + + D L AGH VT+ P E+ KG
Sbjct: 14 NVNAFNILVYSPSFGGSHTNFMARLADTLTEAGHNVTFVVPV-ADEARKG 62
>Z75554-4|CAA99957.2| 534|Caenorhabditis elegans Hypothetical
protein ZC455.6a protein.
Length = 534
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 222 AYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATPF 338
+Y+ L + P+ SH I + L AGH+VT+ PF
Sbjct: 20 SYNFLVISPVYGFSHMKSMAIIANQLADAGHQVTYFQPF 58
>Z71185-2|CAA94904.2| 522|Caenorhabditis elegans Hypothetical
protein C35A5.2 protein.
Length = 522
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 225 YHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATP 335
Y V C P+ + SH+ I D L AGH VT+ P
Sbjct: 21 YLVFC--PLYAHSHHKFLAKIADTLTDAGHNVTFLAP 55
>Z71177-8|CAA94866.2| 525|Caenorhabditis elegans Hypothetical
protein AC3.2 protein.
Length = 525
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 231 VLCVFPIPSRSHNSLGKGIVDALLGAGHEVT-WATPFPPKESTKGLK 368
+L P SRSH I DAL+ AGH+V + T + P G K
Sbjct: 19 ILVYSPSISRSHLISNGRIADALVDAGHDVVMFITEYEPLTEFTGTK 65
>U88311-3|AAB42345.1| 526|Caenorhabditis elegans
Udp-glucuronosyltransferase protein27 protein.
Length = 526
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 228 HVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATPFPPKESTKGLKI 371
+VL P + SH + + D L AGH VT+ P TK L +
Sbjct: 20 NVLVYSPAFAASHTNFMARLADTLTEAGHNVTFLVPIVDVARTKQLGV 67
>AF022972-5|AAC48237.1| 523|Caenorhabditis elegans
Udp-glucuronosyltransferase protein38 protein.
Length = 523
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 222 AYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATP 335
+++ L P+ + SH+ I D+L AGH V + TP
Sbjct: 16 SFNFLVFCPLFAHSHSKFFATIADSLTDAGHNVAFFTP 53
>Z82260-2|CAB05130.1| 344|Caenorhabditis elegans Hypothetical
protein C32H11.3 protein.
Length = 344
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +3
Query: 297 LLGAGHEVTWATPFPPKESTKGLKIIDVSATASVSEMIDMNDQRNADAGIALIRTFAANI 476
L+ + HE FPP + T L +V+A A E N + DAGI + + NI
Sbjct: 94 LITSSHETMQPYFFPPSKFTLSLSNDEVAAFAFKIEWSPFNIPTSYDAGIGM-QPHVLNI 152
Query: 477 TR 482
T+
Sbjct: 153 TK 154
>Z70782-8|CAA94845.2| 536|Caenorhabditis elegans Hypothetical
protein R04B5.9 protein.
Length = 536
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 222 AYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVT 323
AY +L P S+SH I D L AGH VT
Sbjct: 21 AYKILVFSPATSKSHLISNGRIADELAKAGHNVT 54
>U41995-8|AAN84829.1| 350|Caenorhabditis elegans Hypothetical
protein E02C12.8a protein.
Length = 350
Score = 29.1 bits (62), Expect = 3.4
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +3
Query: 354 TKGLKIIDVSATASVSEMIDMNDQRNADAGIALIR---TFAANITRLSLSVPALQQAIVS 524
TKG IID + ++M +AD I +IR TF+A RLS Q ++
Sbjct: 135 TKGYMIIDFVPNI---QTVEMYKSISADTIIPIIRGVATFSALGERLSKED---QHFVMG 188
Query: 525 GKYDAVVTESFFNDAE 572
Y ++ E FFND E
Sbjct: 189 PTYLEMIFEDFFNDVE 204
>U41995-7|AAP68946.1| 405|Caenorhabditis elegans Hypothetical
protein E02C12.8c protein.
Length = 405
Score = 29.1 bits (62), Expect = 3.4
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +3
Query: 354 TKGLKIIDVSATASVSEMIDMNDQRNADAGIALIR---TFAANITRLSLSVPALQQAIVS 524
TKG IID + ++M +AD I +IR TF+A RLS Q ++
Sbjct: 135 TKGYMIIDFVPNI---QTVEMYKSISADTIIPIIRGVATFSALGERLSKED---QHFVMG 188
Query: 525 GKYDAVVTESFFNDAE 572
Y ++ E FFND E
Sbjct: 189 PTYLEMIFEDFFNDVE 204
>U28943-11|AAK68295.1| 319|Caenorhabditis elegans Hypothetical
protein E04F6.15 protein.
Length = 319
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = -1
Query: 584 PVARLGIVEEGLRD-DRVVFPADDRLLQRWYREGQPRDIGSEGPDQRDTSISVSLVVHVN 408
P A++ IV+ L V AD+ L Q+W G + G GP ++ TS +N
Sbjct: 77 PNAQIDIVQCDLNSLSSVKKAADEYLEQKWPLHGLILNAGVFGPSEKTTSDGFEAHFGIN 136
Query: 407 HFTY 396
H +
Sbjct: 137 HLAH 140
>AF100663-3|AAC68980.1| 529|Caenorhabditis elegans
Udp-glucuronosyltransferase protein20 protein.
Length = 529
Score = 29.1 bits (62), Expect = 3.4
Identities = 39/166 (23%), Positives = 66/166 (39%), Gaps = 18/166 (10%)
Frame = +3
Query: 216 ARAYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATPFPPK------ESTKGLKIID 377
A +Y +L + SH D L AGH VT P K +STK + ++
Sbjct: 14 ASSYKILFYTNLFGHSHVKFLGAAADTLTDAGHNVTVLIPVFDKALKTSLKSTKNVIMLQ 73
Query: 378 --------VSATASVSEMIDMNDQRNADAGIALIRT----FAANITRLSLSVPALQQAIV 521
V A++ + I + D N I + T F++ R+ LS + + +
Sbjct: 74 PTEDIANFVKGRATMLKNIWLQDNTNPLTMIKKVETMSKIFSSQCKRV-LSETDIIEKLK 132
Query: 522 SGKYDAVVTESFFNDAEAGYGAVLQVPWILLSSVSIMPHLEAIIDE 659
+ YD +TE F A + A+ + + S S H+ +I +
Sbjct: 133 AENYDLAITEPFDTCAYEFFEAIETRTHVAILSASRYDHVSDVIGQ 178
>U97003-1|AAB52270.2| 527|Caenorhabditis elegans
Udp-glucuronosyltransferase protein32 protein.
Length = 527
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 231 VLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATP 335
VL P + SH + + D L AGH VT+ TP
Sbjct: 22 VLVYSPAYAASHTNFMARLADTLTEAGHNVTFFTP 56
>U61948-8|AAB03147.2| 782|Caenorhabditis elegans Human hcf1 related
protein 1 protein.
Length = 782
Score = 28.7 bits (61), Expect = 4.5
Identities = 24/100 (24%), Positives = 37/100 (37%)
Frame = +3
Query: 309 GHEVTWATPFPPKESTKGLKIIDVSATASVSEMIDMNDQRNADAGIALIRTFAANITRLS 488
G ++TW PP + KII+ S +V +AD+ +A +R +
Sbjct: 655 GAQLTWE---PPSNTNISGKIIEYSVYLAVKNQ----SANSADSQLAFMRVYCGPQADCQ 707
Query: 489 LSVPALQQAIVSGKYDAVVTESFFNDAEAGYGAVLQVPWI 608
+ L A V + E GYG QV W+
Sbjct: 708 VLQSNLGTAFVDQTNKPAIIFRIAARNEKGYGPATQVRWL 747
>U40959-5|AAA81769.1| 531|Caenorhabditis elegans
Udp-glucuronosyltransferase protein46 protein.
Length = 531
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 213 SARAYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVT 323
+A +Y +L P S+SH + D L AGH+VT
Sbjct: 14 AAFSYKILVFSPATSKSHLISNGRLADELARAGHDVT 50
>AF072907-1|AAD12580.1| 782|Caenorhabditis elegans host cell factor
1 protein.
Length = 782
Score = 28.7 bits (61), Expect = 4.5
Identities = 24/100 (24%), Positives = 37/100 (37%)
Frame = +3
Query: 309 GHEVTWATPFPPKESTKGLKIIDVSATASVSEMIDMNDQRNADAGIALIRTFAANITRLS 488
G ++TW PP + KII+ S +V +AD+ +A +R +
Sbjct: 655 GAQLTWE---PPSNTNISGKIIEYSVYLAVKNQ----SANSADSQLAFMRVYCGPQADCQ 707
Query: 489 LSVPALQQAIVSGKYDAVVTESFFNDAEAGYGAVLQVPWI 608
+ L A V + E GYG QV W+
Sbjct: 708 VLQSNLGTAFVDQTNKPAIIFRIAARNEKGYGPATQVRWL 747
>AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPase
protein.
Length = 1237
Score = 28.3 bits (60), Expect = 5.9
Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 4/107 (3%)
Frame = +2
Query: 404 ND*HERPKKR*CWYRVDQDLRCQYHEAVPLGTSAAAGDRQREIRRGRHGVLLQR----CR 571
+D HE+ + W R L+ Q +S D +R I H V R
Sbjct: 1058 SDTHEKRSGQILWVRGLTRLQTQLRVVKAFRSSLEEFDERRSIA-STHSVQSMRGGFWSG 1116
Query: 572 GGLRGSTSSALDPVVQRLHNAPLGSHHR*GAVDYHHTAAVQTNAPTP 712
GG +T+++ +P QR+ A + Y+H +T +P P
Sbjct: 1117 GGRHTTTAASPEPAGQRIAMAAITHRQSPQPYPYYHHQQPRTPSPQP 1163
>AF016440-8|ABD94107.1| 286|Caenorhabditis elegans Dehydrogenases,
short chain protein17, isoform b protein.
Length = 286
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 222 AYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATPFPPKESTKGLK 368
A+++LC +P SHN +V ++L + WA KE K L+
Sbjct: 120 AHYLLCNLLLPVLSHNRSNVIVVGSVLHTWPSLDWADVMATKEYEKYLQ 168
>AF016440-7|AAB65901.2| 317|Caenorhabditis elegans Dehydrogenases,
short chain protein17, isoform a protein.
Length = 317
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 222 AYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATPFPPKESTKGLK 368
A+++LC +P SHN +V ++L + WA KE K L+
Sbjct: 151 AHYLLCNLLLPVLSHNRSNVIVVGSVLHTWPSLDWADVMATKEYEKYLQ 199
>AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane calcium
atpase protein3, isoform b protein.
Length = 1234
Score = 28.3 bits (60), Expect = 5.9
Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 4/107 (3%)
Frame = +2
Query: 404 ND*HERPKKR*CWYRVDQDLRCQYHEAVPLGTSAAAGDRQREIRRGRHGVLLQR----CR 571
+D HE+ + W R L+ Q +S D +R I H V R
Sbjct: 1058 SDTHEKRSGQILWVRGLTRLQTQLRVVKAFRSSLEEFDERRSIA-STHSVQSMRGGFWSG 1116
Query: 572 GGLRGSTSSALDPVVQRLHNAPLGSHHR*GAVDYHHTAAVQTNAPTP 712
GG +T+++ +P QR+ A + Y+H +T +P P
Sbjct: 1117 GGRHTTTAASPEPAGQRIAMAAITHRQSPQPYPYYHHQQPRTPSPQP 1163
>Z81111-2|CAB03266.1| 535|Caenorhabditis elegans Hypothetical
protein T01G5.2 protein.
Length = 535
Score = 27.9 bits (59), Expect = 7.8
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +3
Query: 228 HVLCVFPIPSRSHNS-LGKGIVDALLGAGHEVTWATP---FPPKESTKGLKIIDVSATAS 395
++L P + SH+ LGK + D L GH VT+ P ++ KG+KI
Sbjct: 20 NILVYAPAFAASHSKFLGK-LADTLTERGHNVTYLMPVVNIAKRDECKGVKITKDVVIVE 78
Query: 396 VSEMIDMNDQRNAD 437
E M Q+ AD
Sbjct: 79 AGE--KMLSQKQAD 90
>Z75554-10|CAA99956.1| 535|Caenorhabditis elegans Hypothetical
protein ZC455.5a protein.
Length = 535
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 222 AYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTWATPF 338
+Y L + P+ SH I + L GH+VT+ PF
Sbjct: 19 SYKFLVISPVYGYSHMKFMAIIANQLADEGHQVTYFQPF 57
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,902,455
Number of Sequences: 27780
Number of extensions: 352110
Number of successful extensions: 1064
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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