Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt29b10
(780 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 62 9e-11
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 60 5e-10
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 46 5e-06
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 39 7e-04
SPCC1235.13 |ght6|meu12|hexose transporter Ght6 |Schizosaccharom... 38 0.001
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ... 38 0.002
SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces ... 36 0.005
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 35 0.015
SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces ... 32 0.11
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 27 3.0
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo... 27 4.0
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 27 4.0
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 26 5.3
SPAC323.07c |||MatE family transporter|Schizosaccharomyces pombe... 26 5.3
SPAC2F3.13c |||queuine tRNA-ribosyltransferase |Schizosaccharomy... 26 5.3
SPAC11G7.03 |idh1|glu3|isocitrate dehydrogenase |Schizosaccharom... 26 7.0
SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|c... 26 7.0
SPBC12D12.01 |sad1|SPBC16H5.01c|spindle pole body protein Sad1|S... 25 9.2
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 62.1 bits (144), Expect = 9e-11
Identities = 62/246 (25%), Positives = 114/246 (46%), Gaps = 19/246 (7%)
Frame = +2
Query: 89 QWTAVICALFPILNIVLLIFVPESPTWLXSKGRIEEG----SKVYYWLRGYSDEAKDEL- 253
+W + + + +LI++PESP L K R +E +++Y Y + K L
Sbjct: 247 RWMVGLAMVPAAFQLFILIWLPESPRLLVKKERSQEAYNTLARIYPTAHPYEIKTKLYLI 306
Query: 254 -KGIIDCXLXXDAAPXX-TWKDXVLYFXSPELIKPLIIMIIFFATXQFAGTNAFAFYSIG 427
+G+ D T+K+ LYF +P + LI+ A Q +G N+ ++S
Sbjct: 307 QEGVRDPFSGSRWQKIVKTFKE--LYF-NPSNFRALILACGLQAMQQLSGFNSLMYFSST 363
Query: 428 IIQKAVDKSIDKYVAMFVMDLLRLIASVVACVICKQYGRRPLCFIS--GGLTTISMVGLS 601
I + V + ++ + ++VA + +GRR L ++ G + + + ++
Sbjct: 364 IFE--VVGFNNPTATGLIIAATNFVFTIVAFGVIDFFGRRILLLLTVWGMIAALIVCAVA 421
Query: 602 MFLYLKPEN--------MAW--IPLSCLMLYICAISIGLXPLPWMMCGEIFPIKVRGLGS 751
K EN AW + L +++Y+ + + GL LPW E+FP+ VRGLG+
Sbjct: 422 FHFLPKDENGNYTSGQSNAWAIVVLISMIVYVASYASGLGNLPWQQ-SELFPMSVRGLGT 480
Query: 752 GISSAM 769
G+S+A+
Sbjct: 481 GMSTAV 486
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 59.7 bits (138), Expect = 5e-10
Identities = 50/229 (21%), Positives = 101/229 (44%), Gaps = 13/229 (5%)
Frame = +2
Query: 131 IVLLIFVPESPTWLXSKGRIEEGSKVYYWLRGYSDEAKDELK-GIIDCXLXXDAAPXXTW 307
++ L + PESP +L +E+ K+ + + A+ K +I + D +
Sbjct: 254 LISLFWTPESPRYLLRHNHVEKVYKILSRIHPEAKPAEIAYKVSLIQEGVKVDFPEGNKF 313
Query: 308 KDXV----LYFXSPELIKPLIIMIIFFATXQFAGTNAFAFYSIGIIQKAVDKSIDKYVAM 475
+ + F P + L I QF+GTNA ++S I Q K+
Sbjct: 314 QHFFHSLKVLFTVPSNRRSLFIGCFLQWFQQFSGTNAIQYFSAIIFQSVGFKN--SISVS 371
Query: 476 FVMDLLRLIASVVACVICKQYGRRPLCFISGGLTTISMVGLSMFLYLKPE------NMAW 637
V+ + ++VA + + GRR + + + + ++ + P N W
Sbjct: 372 IVVGATNFVFTIVAFMFIDRIGRRRILLCTSAVMIAGLALCAIAYHFLPADTTQNTNSGW 431
Query: 638 --IPLSCLMLYICAISIGLXPLPWMMCGEIFPIKVRGLGSGISSAMAFV 778
+ L+ +++++ + + G+ +PW E+FP++VR LG+G S+A+ +V
Sbjct: 432 QYVVLASIIIFLASYASGIGNIPWQQA-ELFPMEVRALGAGFSTAINWV 479
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 46.4 bits (105), Expect = 5e-06
Identities = 51/230 (22%), Positives = 98/230 (42%), Gaps = 12/230 (5%)
Frame = +2
Query: 113 LFPILNIVLLIFVPESPTWLXSKGRIEEGSKVY---YWLRGYSDEAKDELKGIIDCXLXX 283
L+ I+ ++ ++F+PESP +L G+ EE +V L S+E ++E +
Sbjct: 191 LWGIITMIGILFLPESPRYLIQVGKDEEAVRVLSESAELFPDSEEVQNEYHRLKSSIDEE 250
Query: 284 DAAPXXTWKDXVLYFXSPELIKPLIIMIIFFATXQFAGTNAFAFYSIGIIQKAVDKSIDK 463
A +W F + + M + + Q G N F +Y ++Q A S
Sbjct: 251 FAGGPCSWAS---IFGKDIRYRTFLGMFV-MSLQQLTGNNYFFYYGFSVMQGAGINS--P 304
Query: 464 YVAMFVMDLLRLIASVVACVICKQYGRRPLCFISGGLTTI-----SMVGLSMFLYLKPEN 628
Y++ ++D + + + +++GRR I G +I S VG S LY K
Sbjct: 305 YLSAMILDAVNFGCTFGGMYVLERFGRRNPLIIGGIWQSICFFIYSAVG-SRALYHKNGT 363
Query: 629 MAWIPLSCLMLYICAISIGL----XPLPWMMCGEIFPIKVRGLGSGISSA 766
+ +++ C G P +++ GE +P++ R + +++A
Sbjct: 364 SNTRAGAVMIVMACLFIFGFAQTWAPAAYVIVGESYPVRYRSKCAAVATA 413
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 39.1 bits (87), Expect = 7e-04
Identities = 57/251 (22%), Positives = 105/251 (41%), Gaps = 16/251 (6%)
Frame = +2
Query: 62 HILGTFISXQWTAVICALFPILNIVLLIFVPESPTWLXSKGRIEEGSKVYYWLRGYSDEA 241
H L S + + I L+ IL +V ++F+PESP +L KGR EE ++ + S E+
Sbjct: 170 HKLRKTASWRTSFGINMLWGILLMVGVLFLPESPRYLIYKGRDEEALRIMCNMAELSPES 229
Query: 242 K------DELKGIIDCXLXXDAAPXXTWKDXVLYFXSPELIKPLIIMIIFFATXQFAGTN 403
+ + +K I+ + A W + ++ L +++ F + G N
Sbjct: 230 EIIQTNFNTIKSDIEIEM---AGGKARWIE--IFGKDIRYRTCLGFLVMLF--RELIGNN 282
Query: 404 AFAFYSIGIIQKAVDKSIDKYVAMFVMDLLRLIASVVACVICKQYGRR-PL----CFISG 568
+ +Y+ + + D ++ ++ + + A GRR PL F S
Sbjct: 283 YYFYYATQVFKGT--GMTDIFLPAVILGAINFGTTFGALYTIDNLGRRNPLIFGAAFQSI 340
Query: 569 GLTTISMVGLSMFLYLKPEN-----MAWIPLSCLMLYICAISIGLXPLPWMMCGEIFPIK 733
+ VG +Y + I SCL L+ S G P+ W++ GE FPI+
Sbjct: 341 CFFIYAAVGDRKLIYKNGTSDHRAGSVMIVFSCLFLFSYCCSWG--PMGWVIVGETFPIR 398
Query: 734 VRGLGSGISSA 766
R + ++++
Sbjct: 399 YRSKCASVATS 409
>SPCC1235.13 |ght6|meu12|hexose transporter Ght6
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 535
Score = 38.3 bits (85), Expect = 0.001
Identities = 55/250 (22%), Positives = 97/250 (38%), Gaps = 15/250 (6%)
Frame = +2
Query: 62 HILGTFISXQWTAVICA--LFPILNIVLLIFVPESPTWLXSKGRIEEGSKVYYWLRGYSD 235
H T QW I L+ IL ++F+PESP +L KGR EE K+ G
Sbjct: 170 HKYTTHPEAQWRVPIGINLLWGILMFFGMLFLPESPRYLAVKGRNEECMKILTRNAGLPA 229
Query: 236 E---AKDELKGIIDCXLXXDAAPXXTWKDXVLYFXSPELIKPLIIMIIFFATXQFAGTNA 406
+ + E I A +W S E+ ++ + A Q G N
Sbjct: 230 DHPIMQKEYNAIQADVEAELAGGPCSWPQ----IFSNEIRYRTLLGMGVMAFQQLTGNNY 285
Query: 407 FAFYSIGIIQKAVDKSIDKYVAMFVMDLLRLIASVVACVICKQYGRRPLCFISGGLTTIS 586
F +Y + + S ++A ++D + + A + + +GRR + G +I
Sbjct: 286 FFYYGTQVFRGTGLNS--PFLAALILDAVNFGCTFGAIFVLEYFGRRGPLIVGGVWQSIC 343
Query: 587 M---VGLSMFLYLKPENMA-------WIPLSCLMLYICAISIGLXPLPWMMCGEIFPIKV 736
+ +P + I SCL ++ A + P +++ GE +PI+
Sbjct: 344 FFIYASVGDRALTRPNGTSNHRAGAVMIVFSCLFIFSFAQT--WAPAAYVIVGESYPIRY 401
Query: 737 RGLGSGISSA 766
R + +++A
Sbjct: 402 RSKCAAVATA 411
>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 557
Score = 37.9 bits (84), Expect = 0.002
Identities = 65/257 (25%), Positives = 110/257 (42%), Gaps = 22/257 (8%)
Frame = +2
Query: 62 HILGTFISXQWTAVICALFPILNIVLLIFVPESPTWLXSKGRIEEGSKVYYWLRGYSDEA 241
H L S + + I L+ I +V ++F+PESP +L KGR EE ++ E+
Sbjct: 170 HKLRKTASWRTSFGINILWGIFLMVGVLFLPESPRYLIYKGRDEEALRIMCQTAELDPES 229
Query: 242 K------DELKGIIDCXLXXDAA--PXXTWKDX----VLYFXSPELIKPLI--IMIIFFA 379
+ + +K I+ + A P K+ VL F + L++ LI ++A
Sbjct: 230 EIIQTNFNTIKSDIEMEMAGGKARWPEVFGKEVRYRTVLGFLTM-LLRELIGNNYYFYYA 288
Query: 380 TXQFAGTNAFAFYSIGIIQKAVDKSIDKYVAMFVMDLLR----LIASVVACVIC----KQ 535
T F GT + +I A++ + A++ +D L LI IC
Sbjct: 289 TQVFKGTGMTDIFLPAVILGAINFGTT-FGALYTIDNLGRRNPLIFGAAFQSICFFIYAA 347
Query: 536 YGRRPLCFISGGLTTISMVGLSMFLYLKPENMAWIPLSCLMLYICAISIGLXPLPWMMCG 715
G R L + +G T+ G M ++ SCL L+ S G P+ W++ G
Sbjct: 348 VGDRKLIYKNG--TSDHRAGAVMIVF-----------SCLFLFSYCCSWG--PMGWVIVG 392
Query: 716 EIFPIKVRGLGSGISSA 766
E FPI+ R + ++++
Sbjct: 393 ETFPIRYRSKCAAVATS 409
>SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 546
Score = 36.3 bits (80), Expect = 0.005
Identities = 51/236 (21%), Positives = 95/236 (40%), Gaps = 19/236 (8%)
Frame = +2
Query: 113 LFPILNIVLLIFVPESPTWLXSKGRIEEGSKVYYWLRGYSDE---AKDELKGI-IDCXLX 280
L+ I+ + + F+PESP +L S GR EE ++ E + E I DC
Sbjct: 187 LWGIITFIGISFLPESPRYLISVGRDEEALQIMAKNNDLPIEHEVIQTEYHVIKSDCEAE 246
Query: 281 XDAAPXXTWKDXVLYFXSPELIKPLIIMIIFFATXQFAGTNAFAFYSIGIIQKAVDKSID 460
P TW + P++ + + + Q G N + +Y + + S
Sbjct: 247 LAGGP-ATWPE----IFGPDIRYRTFLGLGVMSLQQLTGDNYYFYYGFEVFEGTGMNS-- 299
Query: 461 KYVAMFVMDLLRLIASVVACVICKQYGRRPLCFISGGLTTISMVGLSMFLYLKPENMA-- 634
Y++ ++D + + + + +GRR + I G L ++ F+Y N A
Sbjct: 300 PYLSALILDAVNFGCTFGGLFVLEFFGRR-MPLIIGAL----WQSITFFIYAAVGNRALT 354
Query: 635 -------------WIPLSCLMLYICAISIGLXPLPWMMCGEIFPIKVRGLGSGISS 763
I SCL ++ A + G P +++ GE +PI+ R + +++
Sbjct: 355 RKNGTSNHRAGAVMIVFSCLFIFSFAQTWG--PAAYVIVGESYPIRYRSKCAAVAT 408
>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
Ght7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 34.7 bits (76), Expect = 0.015
Identities = 55/247 (22%), Positives = 100/247 (40%), Gaps = 15/247 (6%)
Frame = +2
Query: 71 GTFISXQWTAVICALFPILNIVLLIFVPESPTWLXSKGRIEEGSKVYYWLRGYSDE---A 241
GT + + I L+ I+ +V +IF+PESP +L + G+ +E K+ + E
Sbjct: 143 GTTAQWRISIGINLLWGIITLVGIIFLPESPRYLIAIGKDDEALKIMCYNNDLPLEHEII 202
Query: 242 KDELKGI-IDCXLXXDAAPXXTWKDXVLYFXSPELIKPLIIMIIFFATXQFAGTNAFAFY 418
+ E I DC P W + F + + + M + Q G N + +Y
Sbjct: 203 QTEYHTIKSDCDAELAGGP-ARWPE---IFNANIRYRTFLGMAVMM-FQQLTGANYYFYY 257
Query: 419 SIGIIQKAVDKSIDKYVAMFVMDLLRLIASVVACVICKQYGRRPLCFISGGLTTI----- 583
+ + S Y+A + D + + A + + +GRR + G I
Sbjct: 258 GTQVFRGTGMDS--PYLAALIPDAVNCGCTFGAIFVLEFFGRRSPLIVGGIWQYICFFIY 315
Query: 584 SMVGLSMFLYLK------PENMAWIPLSCLMLYICAISIGLXPLPWMMCGEIFPIKVRGL 745
+ VG LY K I SC L+I + S P +++ GE +P++ R
Sbjct: 316 AAVG-DRALYHKNGTSNHRAGAVMIVFSC--LFIFSFSQTWAPAAYVIVGESYPVRYRSK 372
Query: 746 GSGISSA 766
+ ++++
Sbjct: 373 CAAVATS 379
>SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 547
Score = 31.9 bits (69), Expect = 0.11
Identities = 49/236 (20%), Positives = 96/236 (40%), Gaps = 19/236 (8%)
Frame = +2
Query: 113 LFPILNIVLLIFVPESPTWLXSKGRIEEGSKVY---YWLRGYSDEAKDELKGI-IDCXLX 280
L+ I+ + + F+PESP +L + G+ EE + L + + E I DC
Sbjct: 187 LWGIIMFIGISFLPESPRYLIAIGKDEEALDIMCKNNVLPREHEIIQTEYHVIKTDCEAE 246
Query: 281 XDAAPXXTWKDXVLYFXSPELIKPLIIMIIFFATXQFAGTNAFAFYSIGIIQKAVDKSID 460
P TW D + ++ + + + Q G N + +Y + + S
Sbjct: 247 MAGGP-ATWGDIL----GADIRYRTFLGLGVMSLQQLTGDNYYFYYGFEVFEGTGMNS-- 299
Query: 461 KYVAMFVMDLLRLIASVVACVICKQYGRRPLCFISGGLTTISMVGLSMFLYLKPENMA-- 634
Y++ ++D + + + + +GRR + I GG+ ++ F+Y N A
Sbjct: 300 PYLSALILDAVNFGCTFGGLFVLEFFGRR-MPLIIGGV----WQSITFFIYAAVGNRALT 354
Query: 635 -------------WIPLSCLMLYICAISIGLXPLPWMMCGEIFPIKVRGLGSGISS 763
I SCL ++ A + G P +++ GE +PI+ R + +++
Sbjct: 355 RKNGTSNHRAGAVMIVFSCLFIFSFAQTWG--PAAYVIVGESYPIRYRSKCAAVAT 408
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 647 SCLMLYICAISIGLXPLPWMMCGEIFPIKVRGLGSGISSAM 769
+C ++ + G ++ E+FP +VRG GIS+A+
Sbjct: 452 ACFVIAQLFSNFGPNSTTFIYPAEVFPARVRGTAHGISAAL 492
>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 572
Score = 26.6 bits (56), Expect = 4.0
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 647 SCLMLYICAISIGLXPLPWMMCGEIFPIKVRGLGSGISSAM 769
+C ++ + G ++ E+FP +VRG G+S+A+
Sbjct: 451 ACFVIAQLFSNFGPNSTTFIYPAEVFPARVRGTAHGVSAAL 491
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 26.6 bits (56), Expect = 4.0
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +2
Query: 488 LLRLIASVVACVICKQYGRRPLCFISGGLTTI-SMVGLSMFLYLKPENMAWIP 643
L + +AS + ++ Y P+ + +T S+V L +Y+ P N W P
Sbjct: 109 LFKFLASALVLLLRPNYTMFPMLNVVPSITFFCSLVCLLAEIYVPPANRVWYP 161
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 647 SCLMLYICAISIGLXPLPWMMCGEIFPIKVRGLGSGISSAM 769
+C ++ + G ++ E+FP +VRG G+S+A+
Sbjct: 440 ACFVIAQFFSNFGPNATTFLYPAEVFPARVRGTAHGLSAAL 480
>SPAC323.07c |||MatE family transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 635 WIPLSCLMLYICAISIGLXPLPW 703
W CL+LYIC S P+PW
Sbjct: 283 WFQSICLILYICFSS---TPIPW 302
>SPAC2F3.13c |||queuine tRNA-ribosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 348
Score = 26.2 bits (55), Expect = 5.3
Identities = 15/74 (20%), Positives = 35/74 (47%)
Frame = +2
Query: 398 TNAFAFYSIGIIQKAVDKSIDKYVAMFVMDLLRLIASVVACVICKQYGRRPLCFISGGLT 577
T +F S ++ ++ +D + F D+ L + V C C++Y R + +
Sbjct: 270 TFSFPPPSKDVLNSKIELGLDMWDERFATDMEPLQSGCV-CKTCRRYKRAYVRHLLQARE 328
Query: 578 TISMVGLSMFLYLK 619
++ + L +++Y+K
Sbjct: 329 LVAWILLQLYVYIK 342
>SPAC11G7.03 |idh1|glu3|isocitrate dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 25.8 bits (54), Expect = 7.0
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 597 SPTIEIVVKPPLMKHKGLRPYCLHITQATTEAISLNKSIT 478
+PT I+ +++H GL+ Y I AT I K++T
Sbjct: 294 NPTAAILSACLMLRHLGLKDYADLINAATYSVIEEGKTLT 333
>SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 554
Score = 25.8 bits (54), Expect = 7.0
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 5/152 (3%)
Frame = +2
Query: 326 FXSPELIKPLIIMIIFFATXQFAGT--NAFAFYSIGIIQKAVDK-SIDK-YVAMFVMDLL 493
F S +L I++I+ +A A NAF Y + A + S+ K Y ++ +
Sbjct: 359 FGSRKLAISSILVILSWAVIGLAFPLYNAFLPYYLETRGNANEPLSVAKTYRNSLIVSAI 418
Query: 494 RLIASVVACVICK-QYGRRPLCFISGGLTTISMVGLSMFLYLKPENMAWIPLSCLMLYIC 670
+ S++A V+ + + GR+ +S LT + + + K N A++ +C +
Sbjct: 419 GVPGSLIAGVLVEFRIGRKGTLCLSLILTGVFLFASTT---AKTSN-AYLGWNCTFSFFS 474
Query: 671 AISIGLXPLPWMMCGEIFPIKVRGLGSGISSA 766
I G+ + E+FP KVRG G++++
Sbjct: 475 DIMYGVL---YAYTPEVFPSKVRGTAVGLAAS 503
>SPBC12D12.01 |sad1|SPBC16H5.01c|spindle pole body protein
Sad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 25.4 bits (53), Expect = 9.2
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 431 IQKAVDKSIDKYVAMFVMDLLRLIASVVACVICKQYGRRPLCFI 562
I+ V K + V+M LL A V+ + K+Y RRP FI
Sbjct: 299 IESTVRKYLTDPVSMPNFALLSTGAEVLPALTSKRYVRRPSAFI 342
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,901,155
Number of Sequences: 5004
Number of extensions: 55643
Number of successful extensions: 163
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 377352472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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