Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt29a09
         (204 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    21   4.0  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    21   5.3  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    20   9.2  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    20   9.2  

>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 81  PEPN*TSVQVAKRPMWKGGHPAK 13
           P P+ T+++ A  P+ K G P K
Sbjct: 345 PNPSNTALKGADAPLRKVGDPTK 367


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 133  SNCT*YGICFCNMLINKIKC 192
            S C  YG C CN  +   +C
Sbjct: 997  SQCNQYGQCPCNDNVEGRRC 1016


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
          cell-adhesion protein protein.
          Length = 1881

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 1  LKARLCRMAPFPHR 42
          LK  +CR+ P  HR
Sbjct: 15 LKRTVCRLKPSAHR 28


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 52  GKKAYVERGPSGKAGLL 2
           G   + +RGPSG +G L
Sbjct: 574 GLPVWKDRGPSGPSGPL 590


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,556
Number of Sequences: 2352
Number of extensions: 4386
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 45
effective length of database: 458,139
effective search space used: 10079058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)