Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt29a09
(204 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC125233-1|AAI25234.1| 1516|Homo sapiens UDP-glucose ceramide gl... 29 3.6
AL607038-1|CAI39962.1| 1516|Homo sapiens UDP-glucose ceramide gl... 29 3.6
AL162500-1|CAI40146.1| 1516|Homo sapiens UDP-glucose ceramide gl... 29 3.6
AL158192-1|CAI13708.1| 1516|Homo sapiens UDP-glucose ceramide gl... 29 3.6
AL136104-2|CAH72447.1| 1516|Homo sapiens UDP-glucose ceramide gl... 29 3.6
AL133051-1|CAB61378.1| 1366|Homo sapiens hypothetical protein pr... 29 3.6
AF227906-1|AAF66233.2| 1516|Homo sapiens UDP-glucose:glycoprotei... 29 3.6
BC026031-1|AAH26031.1| 436|Homo sapiens T-box 6 protein. 27 8.4
AK022330-1|BAB14014.1| 295|Homo sapiens protein ( Homo sapiens ... 27 8.4
AJ010279-1|CAB37938.1| 139|Homo sapiens TBX6 protein protein. 27 8.4
AJ007989-1|CAA07812.1| 436|Homo sapiens transcription factor TB... 27 8.4
>BC125233-1|AAI25234.1| 1516|Homo sapiens UDP-glucose ceramide
glucosyltransferase-like 2 protein.
Length = 1516
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +1
Query: 25 APFPHRPFCHLHRGLIG--FWR-GYFNHKSTRRK*H 123
AP+ + PFC R + G FW+ GY+ RRK H
Sbjct: 1353 APYGYTPFCDSRREMDGYRFWKTGYWASHLLRRKYH 1388
>AL607038-1|CAI39962.1| 1516|Homo sapiens UDP-glucose ceramide
glucosyltransferase-like 2 protein.
Length = 1516
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +1
Query: 25 APFPHRPFCHLHRGLIG--FWR-GYFNHKSTRRK*H 123
AP+ + PFC R + G FW+ GY+ RRK H
Sbjct: 1353 APYGYTPFCDSRREMDGYRFWKTGYWASHLLRRKYH 1388
>AL162500-1|CAI40146.1| 1516|Homo sapiens UDP-glucose ceramide
glucosyltransferase-like 2 protein.
Length = 1516
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +1
Query: 25 APFPHRPFCHLHRGLIG--FWR-GYFNHKSTRRK*H 123
AP+ + PFC R + G FW+ GY+ RRK H
Sbjct: 1353 APYGYTPFCDSRREMDGYRFWKTGYWASHLLRRKYH 1388
>AL158192-1|CAI13708.1| 1516|Homo sapiens UDP-glucose ceramide
glucosyltransferase-like 2 protein.
Length = 1516
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +1
Query: 25 APFPHRPFCHLHRGLIG--FWR-GYFNHKSTRRK*H 123
AP+ + PFC R + G FW+ GY+ RRK H
Sbjct: 1353 APYGYTPFCDSRREMDGYRFWKTGYWASHLLRRKYH 1388
>AL136104-2|CAH72447.1| 1516|Homo sapiens UDP-glucose ceramide
glucosyltransferase-like 2 protein.
Length = 1516
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +1
Query: 25 APFPHRPFCHLHRGLIG--FWR-GYFNHKSTRRK*H 123
AP+ + PFC R + G FW+ GY+ RRK H
Sbjct: 1353 APYGYTPFCDSRREMDGYRFWKTGYWASHLLRRKYH 1388
>AL133051-1|CAB61378.1| 1366|Homo sapiens hypothetical protein
protein.
Length = 1366
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +1
Query: 25 APFPHRPFCHLHRGLIG--FWR-GYFNHKSTRRK*H 123
AP+ + PFC R + G FW+ GY+ RRK H
Sbjct: 1203 APYGYTPFCDSRREMDGYRFWKTGYWASHLLRRKYH 1238
>AF227906-1|AAF66233.2| 1516|Homo sapiens UDP-glucose:glycoprotein
glucosyltransferase 2 precursor protein.
Length = 1516
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +1
Query: 25 APFPHRPFCHLHRGLIG--FWR-GYFNHKSTRRK*H 123
AP+ + PFC R + G FW+ GY+ RRK H
Sbjct: 1353 APYGYTPFCDSRREMDGYRFWKTGYWASHLLRRKYH 1388
>BC026031-1|AAH26031.1| 436|Homo sapiens T-box 6 protein.
Length = 436
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 135 GKVTMLFPPSTFVIEIASPEPN*TSVQVAKRPMWKG 28
G + FP +TF+ A P T +++A P KG
Sbjct: 235 GMASFRFPETTFISVTAYQNPQITQLKIAANPFAKG 270
>AK022330-1|BAB14014.1| 295|Homo sapiens protein ( Homo sapiens
cDNA FLJ12268 fis, clone MAMMA1001627, highly similar to
Homo sapiens mRNA for transcription factor TBX6. ).
Length = 295
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 135 GKVTMLFPPSTFVIEIASPEPN*TSVQVAKRPMWKG 28
G + FP +TF+ A P T +++A P KG
Sbjct: 235 GMASFRFPETTFISVTAYQNPQITQLKIAANPFAKG 270
>AJ010279-1|CAB37938.1| 139|Homo sapiens TBX6 protein protein.
Length = 139
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 135 GKVTMLFPPSTFVIEIASPEPN*TSVQVAKRPMWKG 28
G + FP +TF+ A P T +++A P KG
Sbjct: 102 GMASFRFPETTFISVTAYQNPQITQLKIAANPFAKG 137
>AJ007989-1|CAA07812.1| 436|Homo sapiens transcription factor TBX6
protein.
Length = 436
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 135 GKVTMLFPPSTFVIEIASPEPN*TSVQVAKRPMWKG 28
G + FP +TF+ A P T +++A P KG
Sbjct: 235 GMASFRFPETTFISVTAYQNPQITQLKIAANPFAKG 270
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,733,584
Number of Sequences: 237096
Number of extensions: 620399
Number of successful extensions: 1018
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 76,859,062
effective HSP length: 46
effective length of database: 65,952,646
effective search space used: 1385005566
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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