Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28p23
(408 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 4.1
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 4.1
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 5.4
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 5.4
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 5.4
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 5.4
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 5.4
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 5.4
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 5.4
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 5.4
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 5.4
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 21 7.1
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.4 bits (43), Expect = 4.1
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -3
Query: 295 TTIHPMFFSRSMKRY*SVSLIECSCDP 215
TTI+P+ ++ +Y + C C P
Sbjct: 309 TTINPILYNVMSAKYRNAFKETCRCSP 335
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.4 bits (43), Expect = 4.1
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -1
Query: 87 NVKWEEKSKHID 52
N WE K HID
Sbjct: 187 NYNWEHKETHID 198
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 5.4
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 169 YGFYPPFNDDFG 204
Y F+PP N FG
Sbjct: 160 YRFHPPLNPRFG 171
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 5.4
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 169 YGFYPPFNDDFG 204
Y F+PP N FG
Sbjct: 160 YRFHPPLNPRFG 171
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 5.4
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 169 YGFYPPFNDDFG 204
Y F+PP N FG
Sbjct: 160 YRFHPPLNPRFG 171
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 5.4
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 169 YGFYPPFNDDFG 204
Y F+PP N FG
Sbjct: 160 YRFHPPLNPRFG 171
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 5.4
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 169 YGFYPPFNDDFG 204
Y F+PP N FG
Sbjct: 164 YRFHPPLNPRFG 175
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.0 bits (42), Expect = 5.4
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 169 YGFYPPFNDDFG 204
Y F+PP N FG
Sbjct: 169 YRFHPPLNPRFG 180
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.0 bits (42), Expect = 5.4
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 169 YGFYPPFNDDFG 204
Y F+PP N FG
Sbjct: 169 YRFHPPLNPRFG 180
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.0 bits (42), Expect = 5.4
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 169 YGFYPPFNDDFG 204
Y F+PP N FG
Sbjct: 169 YRFHPPLNPRFG 180
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.0 bits (42), Expect = 5.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 196 DFGSGVKDRSYIRLRIPINNVS 261
+F G+ RSY+ + NNV+
Sbjct: 49 NFDKGINWRSYVVCDVAYNNVN 70
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 20.6 bits (41), Expect = 7.1
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 335 GGYIHGFESRSG*NH 291
G YI+ FE+ +G +H
Sbjct: 40 GNYINNFETSNGISH 54
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,758
Number of Sequences: 438
Number of extensions: 2011
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10256061
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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