Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28o08
(634 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC015529-1|AAH15529.2| 311|Homo sapiens ribose 5-phosphate isom... 204 3e-52
AY050633-1|AAK95569.1| 237|Homo sapiens ribose 5-phosphate isom... 204 3e-52
AC096579-1|AAY24200.1| 177|Homo sapiens unknown protein. 133 4e-31
AC062029-2|AAY14778.1| 60|Homo sapiens unknown protein. 75 3e-13
X53051-1|CAA37218.1| 739|Homo sapiens precursor peptide protein. 37 0.068
M73255-1|AAA61270.1| 739|Homo sapiens vascular cell adhesion mo... 37 0.068
M60335-1|AAA61269.1| 739|Homo sapiens vascular cell adhesion mo... 37 0.068
M30257-1|AAA51917.1| 647|Homo sapiens VCAM1 protein. 37 0.068
BC085003-1|AAH85003.1| 739|Homo sapiens vascular cell adhesion ... 37 0.068
BC068490-1|AAH68490.2| 739|Homo sapiens vascular cell adhesion ... 37 0.068
BC017276-1|AAH17276.3| 739|Homo sapiens vascular cell adhesion ... 37 0.068
AK223266-1|BAD96986.1| 739|Homo sapiens vascular cell adhesion ... 37 0.068
AF536818-1|AAM96190.1| 739|Homo sapiens vascular cell adhesion ... 37 0.068
BC001965-1|AAH01965.1| 910|Homo sapiens RAD54 homolog B (S. cer... 30 7.8
AF112481-1|AAD34331.1| 910|Homo sapiens RAD54B protein protein. 30 7.8
>BC015529-1|AAH15529.2| 311|Homo sapiens ribose 5-phosphate
isomerase A (ribose 5-phosphate epimerase) protein.
Length = 311
Score = 204 bits (497), Expect = 3e-52
Identities = 91/156 (58%), Positives = 123/156 (78%)
Frame = +1
Query: 166 EQAKQVAAYQAVDQFVTNNCIFGVGSGSTVVYAVQRLAERVESEKLKVTCIPTSFQAKQL 345
E+AK++A AV+ V NN + G+GSGST+V+AVQR+AERV+ E L + CIPTSFQA+QL
Sbjct: 79 EEAKKLAGRAAVENHVRNNQVLGIGSGSTIVHAVQRIAERVKQENLNLVCIPTSFQARQL 138
Query: 346 IIKHGLNLGELETNPNIDVTIDGADEVDSNMTLIKGGGGCLLQEKIIASCSKKLIVIADY 525
I+++GL L +L+ +P ID+ IDGADEVD+++ LIKGGGGCL QEKI+A + + IVIAD+
Sbjct: 139 ILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGYASRFIVIADF 198
Query: 526 TKDSVKLGDRYKKGVPIEVIPMAYVPIKNKIISLYG 633
KDS LGD++ KG+PIEVIPMAYVP+ + +G
Sbjct: 199 RKDSKNLGDQWHKGIPIEVIPMAYVPVSRAVSQKFG 234
>AY050633-1|AAK95569.1| 237|Homo sapiens ribose 5-phosphate
isomerase protein.
Length = 237
Score = 204 bits (497), Expect = 3e-52
Identities = 91/156 (58%), Positives = 123/156 (78%)
Frame = +1
Query: 166 EQAKQVAAYQAVDQFVTNNCIFGVGSGSTVVYAVQRLAERVESEKLKVTCIPTSFQAKQL 345
E+AK++A AV+ V NN + G+GSGST+V+AVQR+AERV+ E L + CIPTSFQA+QL
Sbjct: 5 EEAKKLAGRAAVENHVRNNQVLGIGSGSTIVHAVQRIAERVKQENLNLVCIPTSFQARQL 64
Query: 346 IIKHGLNLGELETNPNIDVTIDGADEVDSNMTLIKGGGGCLLQEKIIASCSKKLIVIADY 525
I+++GL L +L+ +P ID+ IDGADEVD+++ LIKGGGGCL QEKI+A + + IVIAD+
Sbjct: 65 ILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGYASRFIVIADF 124
Query: 526 TKDSVKLGDRYKKGVPIEVIPMAYVPIKNKIISLYG 633
KDS LGD++ KG+PIEVIPMAYVP+ + +G
Sbjct: 125 RKDSKNLGDQWHKGIPIEVIPMAYVPVSRAVSQKFG 160
>AC096579-1|AAY24200.1| 177|Homo sapiens unknown protein.
Length = 177
Score = 133 bits (322), Expect = 4e-31
Identities = 58/100 (58%), Positives = 79/100 (79%)
Frame = +1
Query: 334 AKQLIIKHGLNLGELETNPNIDVTIDGADEVDSNMTLIKGGGGCLLQEKIIASCSKKLIV 513
A+QLI+++GL L +L+ +P ID+ IDGADEVD+++ LIKGGGGCL QEKI+A + + IV
Sbjct: 1 ARQLILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGYASRFIV 60
Query: 514 IADYTKDSVKLGDRYKKGVPIEVIPMAYVPIKNKIISLYG 633
IAD+ KDS LGD++ KG+PIEVIPMAYVP+ + +G
Sbjct: 61 IADFRKDSKNLGDQWHKGIPIEVIPMAYVPVSRAVSQKFG 100
>AC062029-2|AAY14778.1| 60|Homo sapiens unknown protein.
Length = 60
Score = 74.5 bits (175), Expect = 3e-13
Identities = 33/56 (58%), Positives = 44/56 (78%)
Frame = +1
Query: 166 EQAKQVAAYQAVDQFVTNNCIFGVGSGSTVVYAVQRLAERVESEKLKVTCIPTSFQ 333
E+AK++A AV+ V NN + G+GSGST+V+AVQR+AERV+ E L + CIPTSFQ
Sbjct: 5 EEAKKLAGRAAVENHVRNNQVLGIGSGSTIVHAVQRIAERVKQENLNLVCIPTSFQ 60
>X53051-1|CAA37218.1| 739|Homo sapiens precursor peptide protein.
Length = 739
Score = 36.7 bits (81), Expect = 0.068
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Frame = +1
Query: 247 STVVYAVQRLAERVESEKLKVTCIPTSFQAKQLIIKHGLNLGELE-TNPNIDVTIDGADE 423
+TV+ + + E E + +TC+ F A +++ L GEL+ + N +T+
Sbjct: 514 TTVLVSPSSILE--EGSSVNMTCLSQGFPAPKILWSRQLPNGELQPLSENATLTLISTKM 571
Query: 424 VDSNMTLIKG---GGGCLLQEKIIASCSKKLIVIADYTKDSVKLGDRYKKGVPIEVIPMA 594
DS + L +G G + ++I + K I + + +SVK GD +P
Sbjct: 572 EDSGVYLCEGINQAGRSRKEVELIIQVTPKDIKLTAFPSESVKEGDTVIISCTCGNVPET 631
Query: 595 YVPIKNK 615
++ +K K
Sbjct: 632 WIILKKK 638
>M73255-1|AAA61270.1| 739|Homo sapiens vascular cell adhesion
molecule-1 protein.
Length = 739
Score = 36.7 bits (81), Expect = 0.068
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Frame = +1
Query: 247 STVVYAVQRLAERVESEKLKVTCIPTSFQAKQLIIKHGLNLGELE-TNPNIDVTIDGADE 423
+TV+ + + E E + +TC+ F A +++ L GEL+ + N +T+
Sbjct: 514 TTVLVSPSSILE--EGSSVNMTCLSQGFPAPKILWSRQLPNGELQPLSENATLTLISTKM 571
Query: 424 VDSNMTLIKG---GGGCLLQEKIIASCSKKLIVIADYTKDSVKLGDRYKKGVPIEVIPMA 594
DS + L +G G + ++I + K I + + +SVK GD +P
Sbjct: 572 EDSGVYLCEGINQAGRSRKEVELIIQVTPKDIKLTAFPSESVKEGDTVIISCTCGNVPET 631
Query: 595 YVPIKNK 615
++ +K K
Sbjct: 632 WIILKKK 638
>M60335-1|AAA61269.1| 739|Homo sapiens vascular cell adhesion
molecule-1 protein.
Length = 739
Score = 36.7 bits (81), Expect = 0.068
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Frame = +1
Query: 247 STVVYAVQRLAERVESEKLKVTCIPTSFQAKQLIIKHGLNLGELE-TNPNIDVTIDGADE 423
+TV+ + + E E + +TC+ F A +++ L GEL+ + N +T+
Sbjct: 514 TTVLVSPSSILE--EGSSVNMTCLSQGFPAPKILWSRQLPNGELQPLSENATLTLISTKM 571
Query: 424 VDSNMTLIKG---GGGCLLQEKIIASCSKKLIVIADYTKDSVKLGDRYKKGVPIEVIPMA 594
DS + L +G G + ++I + K I + + +SVK GD +P
Sbjct: 572 EDSGVYLCEGINQAGRSRKEVELIIQVTPKDIKLTAFPSESVKEGDTVIISCTCGNVPET 631
Query: 595 YVPIKNK 615
++ +K K
Sbjct: 632 WIILKKK 638
>M30257-1|AAA51917.1| 647|Homo sapiens VCAM1 protein.
Length = 647
Score = 36.7 bits (81), Expect = 0.068
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Frame = +1
Query: 247 STVVYAVQRLAERVESEKLKVTCIPTSFQAKQLIIKHGLNLGELE-TNPNIDVTIDGADE 423
+TV+ + + E E + +TC+ F A +++ L GEL+ + N +T+
Sbjct: 422 TTVLVSPSSILE--EGSSVNMTCLSQGFPAPKILWSRQLPNGELQPLSENATLTLISTKM 479
Query: 424 VDSNMTLIKG---GGGCLLQEKIIASCSKKLIVIADYTKDSVKLGDRYKKGVPIEVIPMA 594
DS + L +G G + ++I + K I + + +SVK GD +P
Sbjct: 480 EDSGVYLCEGINQAGRSRKEVELIIQVTPKDIKLTAFPSESVKEGDTVIISCTCGNVPET 539
Query: 595 YVPIKNK 615
++ +K K
Sbjct: 540 WIILKKK 546
>BC085003-1|AAH85003.1| 739|Homo sapiens vascular cell adhesion
molecule 1 protein.
Length = 739
Score = 36.7 bits (81), Expect = 0.068
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Frame = +1
Query: 247 STVVYAVQRLAERVESEKLKVTCIPTSFQAKQLIIKHGLNLGELE-TNPNIDVTIDGADE 423
+TV+ + + E E + +TC+ F A +++ L GEL+ + N +T+
Sbjct: 514 TTVLVSPSSILE--EGSSVNMTCLSQGFPAPKILWSRQLPNGELQPLSENATLTLISTKM 571
Query: 424 VDSNMTLIKG---GGGCLLQEKIIASCSKKLIVIADYTKDSVKLGDRYKKGVPIEVIPMA 594
DS + L +G G + ++I + K I + + +SVK GD +P
Sbjct: 572 EDSGVYLCEGINQAGRSRKEVELIIQVTPKDIKLTAFPSESVKEGDTVIISCTCGNVPET 631
Query: 595 YVPIKNK 615
++ +K K
Sbjct: 632 WIILKKK 638
>BC068490-1|AAH68490.2| 739|Homo sapiens vascular cell adhesion
molecule 1 protein.
Length = 739
Score = 36.7 bits (81), Expect = 0.068
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Frame = +1
Query: 247 STVVYAVQRLAERVESEKLKVTCIPTSFQAKQLIIKHGLNLGELE-TNPNIDVTIDGADE 423
+TV+ + + E E + +TC+ F A +++ L GEL+ + N +T+
Sbjct: 514 TTVLVSPSSILE--EGSSVNMTCLSQGFPAPKILWSRQLPNGELQPLSENATLTLISTKM 571
Query: 424 VDSNMTLIKG---GGGCLLQEKIIASCSKKLIVIADYTKDSVKLGDRYKKGVPIEVIPMA 594
DS + L +G G + ++I + K I + + +SVK GD +P
Sbjct: 572 EDSGVYLCEGINQAGRSRKEVELIIQVTPKDIKLTAFPSESVKEGDTVIISCTCGNVPET 631
Query: 595 YVPIKNK 615
++ +K K
Sbjct: 632 WIILKKK 638
>BC017276-1|AAH17276.3| 739|Homo sapiens vascular cell adhesion
molecule 1 protein.
Length = 739
Score = 36.7 bits (81), Expect = 0.068
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Frame = +1
Query: 247 STVVYAVQRLAERVESEKLKVTCIPTSFQAKQLIIKHGLNLGELE-TNPNIDVTIDGADE 423
+TV+ + + E E + +TC+ F A +++ L GEL+ + N +T+
Sbjct: 514 TTVLVSPSSILE--EGSSVNMTCLSQGFPAPKILWSRQLPNGELQPLSENATLTLISTKM 571
Query: 424 VDSNMTLIKG---GGGCLLQEKIIASCSKKLIVIADYTKDSVKLGDRYKKGVPIEVIPMA 594
DS + L +G G + ++I + K I + + +SVK GD +P
Sbjct: 572 EDSGVYLCEGINQAGRSRKEVELIIQVTPKDIKLTAFPSESVKEGDTVIISCTCGNVPET 631
Query: 595 YVPIKNK 615
++ +K K
Sbjct: 632 WIILKKK 638
>AK223266-1|BAD96986.1| 739|Homo sapiens vascular cell adhesion
molecule 1 isoform a precursor variant protein.
Length = 739
Score = 36.7 bits (81), Expect = 0.068
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Frame = +1
Query: 247 STVVYAVQRLAERVESEKLKVTCIPTSFQAKQLIIKHGLNLGELE-TNPNIDVTIDGADE 423
+TV+ + + E E + +TC+ F A +++ L GEL+ + N +T+
Sbjct: 514 TTVLVSPSSILE--EGSSVNMTCLSQGFPAPKILWSRQLPNGELQPLSENATLTLISTKM 571
Query: 424 VDSNMTLIKG---GGGCLLQEKIIASCSKKLIVIADYTKDSVKLGDRYKKGVPIEVIPMA 594
DS + L +G G + ++I + K I + + +SVK GD +P
Sbjct: 572 EDSGVYLCEGINQAGRSRKEVELIIQVTPKDIKLTAFPSESVKEGDTVIISCTCGNVPET 631
Query: 595 YVPIKNK 615
++ +K K
Sbjct: 632 WIILKKK 638
>AF536818-1|AAM96190.1| 739|Homo sapiens vascular cell adhesion
molecule 1 protein.
Length = 739
Score = 36.7 bits (81), Expect = 0.068
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Frame = +1
Query: 247 STVVYAVQRLAERVESEKLKVTCIPTSFQAKQLIIKHGLNLGELE-TNPNIDVTIDGADE 423
+TV+ + + E E + +TC+ F A +++ L GEL+ + N +T+
Sbjct: 514 TTVLVSPSSILE--EGSSVNMTCLSQGFPAPKILWSRQLPNGELQPLSENATLTLISTKM 571
Query: 424 VDSNMTLIKG---GGGCLLQEKIIASCSKKLIVIADYTKDSVKLGDRYKKGVPIEVIPMA 594
DS + L +G G + ++I + K I + + +SVK GD +P
Sbjct: 572 EDSGVYLCEGINQAGRSRKEVELIIQVTPKDIKLTAFPSESVKEGDTVIISCTCGNVPET 631
Query: 595 YVPIKNK 615
++ +K K
Sbjct: 632 WIILKKK 638
>BC001965-1|AAH01965.1| 910|Homo sapiens RAD54 homolog B (S.
cerevisiae) protein.
Length = 910
Score = 29.9 bits (64), Expect = 7.8
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 202 DQFVTNNCIFGVGSGSTVVYAVQRLAERVESEKLKVTCIPTSFQAKQ 342
D F + C F +G GST + ++A + S K C P+S + +Q
Sbjct: 200 DDFSSGRC-FQLGGGSTAISHSSQVARKCFSNPFKSVCKPSSKENRQ 245
>AF112481-1|AAD34331.1| 910|Homo sapiens RAD54B protein protein.
Length = 910
Score = 29.9 bits (64), Expect = 7.8
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 202 DQFVTNNCIFGVGSGSTVVYAVQRLAERVESEKLKVTCIPTSFQAKQ 342
D F + C F +G GST + ++A + S K C P+S + +Q
Sbjct: 200 DDFSSGRC-FQLGGGSTAISHSSQVARKCFSNPFKSVCKPSSKENRQ 245
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,783,284
Number of Sequences: 237096
Number of extensions: 1471997
Number of successful extensions: 3100
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3100
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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