Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28o08
         (634 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3577|AAM68242.2|  280|Drosophila melanogaster CG30410-P...   213   1e-55
AY061165-1|AAL28713.1|  493|Drosophila melanogaster LD13176p pro...    29   4.0  
AE014296-2650|AAF49528.3|  493|Drosophila melanogaster CG5151-PA...    29   4.0  
AE014296-2649|AAS64987.1|  695|Drosophila melanogaster CG5151-PB...    29   4.0  
AY075351-1|AAL68210.1|  238|Drosophila melanogaster GH26134p pro...    29   5.2  
AE013599-3641|AAF47033.1|  238|Drosophila melanogaster CG5398-PA...    29   5.2  

>AE013599-3577|AAM68242.2|  280|Drosophila melanogaster CG30410-PA
           protein.
          Length = 280

 Score =  213 bits (521), Expect = 1e-55
 Identities = 102/162 (62%), Positives = 133/162 (82%), Gaps = 3/162 (1%)
 Frame = +1

Query: 157 MSLEQAKQVAAYQAVDQFVTNNC-IFGVGSGSTVVYAVQRLAERV--ESEKLKVTCIPTS 327
           ++L+ AK+ AA  AVDQ+VT +  I G+GSGSTVVYAVQR+AERV  E E   + C+P+S
Sbjct: 43  IALDAAKKTAARTAVDQWVTEDTKILGIGSGSTVVYAVQRIAERVWKEGELTDLICVPSS 102

Query: 328 FQAKQLIIKHGLNLGELETNPNIDVTIDGADEVDSNMTLIKGGGGCLLQEKIIASCSKKL 507
           +QA+ LI+ + LNLG+L+ NPNIDV IDGADEVD +M LIKGGGGCLLQEK++ASC+K  
Sbjct: 103 YQARHLILDYNLNLGDLDRNPNIDVAIDGADEVDRHMVLIKGGGGCLLQEKVVASCAKHF 162

Query: 508 IVIADYTKDSVKLGDRYKKGVPIEVIPMAYVPIKNKIISLYG 633
           IV+ADYTK+S++LG+++ +GVPIEV PMAYVPIK  I +L+G
Sbjct: 163 IVVADYTKNSIRLGEQWCRGVPIEVAPMAYVPIKLHIEALFG 204


>AY061165-1|AAL28713.1|  493|Drosophila melanogaster LD13176p
           protein.
          Length = 493

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = -3

Query: 446 ISVMFESTSSAPSIVTSIFGFVSSSPRLSPCLIISCFA*KEVGMQVTFSFSDSTRSASLC 267
           +S    S+ S P+ +T  F  +SS P+  P   ++  A       V+ S S S+ ++S C
Sbjct: 281 VSASSSSSKSKPNAITKFFSRISS-PKSPPSCTMTSVATASPASSVSMSSSASSLASSAC 339

Query: 266 TA 261
            +
Sbjct: 340 VS 341


>AE014296-2650|AAF49528.3|  493|Drosophila melanogaster CG5151-PA,
           isoform A protein.
          Length = 493

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = -3

Query: 446 ISVMFESTSSAPSIVTSIFGFVSSSPRLSPCLIISCFA*KEVGMQVTFSFSDSTRSASLC 267
           +S    S+ S P+ +T  F  +SS P+  P   ++  A       V+ S S S+ ++S C
Sbjct: 281 VSASSSSSKSKPNAITKFFSRISS-PKSPPSCTMTSVATASPASSVSMSSSASSLASSAC 339

Query: 266 TA 261
            +
Sbjct: 340 VS 341


>AE014296-2649|AAS64987.1|  695|Drosophila melanogaster CG5151-PB,
           isoform B protein.
          Length = 695

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = -3

Query: 446 ISVMFESTSSAPSIVTSIFGFVSSSPRLSPCLIISCFA*KEVGMQVTFSFSDSTRSASLC 267
           +S    S+ S P+ +T  F  +SS P+  P   ++  A       V+ S S S+ ++S C
Sbjct: 483 VSASSSSSKSKPNAITKFFSRISS-PKSPPSCTMTSVATASPASSVSMSSSASSLASSAC 541

Query: 266 TA 261
            +
Sbjct: 542 VS 543


>AY075351-1|AAL68210.1|  238|Drosophila melanogaster GH26134p
           protein.
          Length = 238

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -3

Query: 407 IVTSIFGFVSSSPRLSPCLIISCFA*KEVGMQVTFSF 297
           +V  +FGFVS +   +PC+ ISC+    + ++V   +
Sbjct: 52  VVMHVFGFVSGA-HSNPCISISCYLMGYIALEVMMMY 87


>AE013599-3641|AAF47033.1|  238|Drosophila melanogaster CG5398-PA
           protein.
          Length = 238

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -3

Query: 407 IVTSIFGFVSSSPRLSPCLIISCFA*KEVGMQVTFSF 297
           +V  +FGFVS +   +PC+ ISC+    + ++V   +
Sbjct: 52  VVMHVFGFVSGA-HSNPCISISCYLMGYIALEVMMMY 87


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,817,403
Number of Sequences: 53049
Number of extensions: 492454
Number of successful extensions: 1259
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)