Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28o08
         (634 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10438-7|AAA19091.1|  251|Caenorhabditis elegans Hypothetical pr...   161   5e-40
Z81064-1|CAB02962.2|  655|Caenorhabditis elegans Hypothetical pr...    31   0.52 
AL110484-28|CAB54395.2|  419|Caenorhabditis elegans Hypothetical...    29   2.8  
Z93387-1|CAB07651.1|  376|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z81044-9|CAB02812.2|  677|Caenorhabditis elegans Hypothetical pr...    27   8.4  

>U10438-7|AAA19091.1|  251|Caenorhabditis elegans Hypothetical
           protein B0280.3 protein.
          Length = 251

 Score =  161 bits (390), Expect = 5e-40
 Identities = 79/153 (51%), Positives = 106/153 (69%), Gaps = 1/153 (0%)
 Frame = +1

Query: 163 LEQAKQVAAYQAVDQFVTNNCIFGVGSGSTVVYAVQRLAERVESEKLK-VTCIPTSFQAK 339
           +EQAK+ AA+   +++V + C  GVGSGSTV Y V+ L +  ++  LK + C+PTSF  K
Sbjct: 14  IEQAKKRAAFACGEKYVQSGCRLGVGSGSTVKYLVEYLKQGFQNGSLKDIICVPTSFLTK 73

Query: 340 QLIIKHGLNLGELETNPNIDVTIDGADEVDSNMTLIKGGGGCLLQEKIIASCSKKLIVIA 519
           Q +I+ GL + +L+++P +DV IDGADEVD   T IKGGGGCL QEKI+ + +K   VIA
Sbjct: 74  QWLIESGLPVSDLDSHPELDVCIDGADEVDGQFTCIKGGGGCLAQEKIVQTAAKNFYVIA 133

Query: 520 DYTKDSVKLGDRYKKGVPIEVIPMAYVPIKNKI 618
           DY KDS  LGDRY   VPIEV+P+A  P+   I
Sbjct: 134 DYLKDSKHLGDRY-PNVPIEVLPLAAQPLLRSI 165


>Z81064-1|CAB02962.2|  655|Caenorhabditis elegans Hypothetical
           protein F16B12.1 protein.
          Length = 655

 Score = 31.5 bits (68), Expect = 0.52
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +1

Query: 409 DGADEVDSNMTLIKGGGGCLLQEKIIASCSKKLIVIA 519
           +G  EV  N TL K GG CL   K+     K LI+I+
Sbjct: 466 EGNVEVFVNWTLTKSGGSCLSLMKLSVDVDKPLIIIS 502


>AL110484-28|CAB54395.2|  419|Caenorhabditis elegans Hypothetical
           protein Y38E10A.4 protein.
          Length = 419

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 95  SYYLSSISVYNNILRLF*FTTQYSLHYTDVY 3
           SY LS+   YN +L+   F+T  +L Y  VY
Sbjct: 330 SYLLSTTGAYNILLKFTDFSTNLNLDYVTVY 360


>Z93387-1|CAB07651.1|  376|Caenorhabditis elegans Hypothetical
           protein T02E9.1 protein.
          Length = 376

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -3

Query: 464 HPPPPLISVMFESTSSAPSIVTSIFGFVSSSPRLSPCLIIS 342
           +PPPPL+   F  T + P  +  +FG + ++  LS    I+
Sbjct: 10  YPPPPLVGASFAKT-AIPYSICFVFGTLGNTAVLSYVFFIT 49


>Z81044-9|CAB02812.2|  677|Caenorhabditis elegans Hypothetical
           protein C30H6.6 protein.
          Length = 677

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 400 VTIDGADEVDSNMTLIKGGGGCLLQEKIIASCS 498
           VT+DG D  D N T  +   G + QE ++ +CS
Sbjct: 470 VTVDGVDLRDLNATTWRHAIGTVGQEPVLFTCS 502


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,025,252
Number of Sequences: 27780
Number of extensions: 265559
Number of successful extensions: 745
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)