Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28o06
(249 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_02_0151 + 5895708-5895736,5896291-5896403,5897956-5898064,589... 71 2e-13
08_02_0468 - 17505905-17506002,17506295-17506424,17506662-175067... 63 3e-11
09_02_0429 + 9306862-9306970,9307834-9307942,9308538-9308616,930... 52 6e-08
10_08_0197 + 15666873-15666916,15667098-15667177,15667490-156676... 32 0.056
09_02_0285 + 6894899-6895114,6896197-6896422,6896889-6896992,689... 30 0.23
01_06_1289 - 36010924-36011001,36011441-36011518,36012321-360124... 29 0.39
12_01_0906 + 8799284-8799441,8800865-8801690,8801933-8802055,880... 29 0.52
05_05_0110 + 22470869-22470920,22471044-22471146,22473261-224733... 29 0.52
01_05_0633 + 23840427-23840562,23840699-23840768,23840846-238409... 29 0.69
07_01_0481 - 3621798-3621926,3622572-3622660,3622780-3622933,362... 28 0.91
05_01_0561 + 4905107-4905272,4905945-4906033,4906832-4906960 28 0.91
03_06_0260 - 32717142-32717270,32717743-32717831,32717950-327180... 28 0.91
01_06_0129 - 26770543-26770720,26774592-26774719,26774829-267749... 28 0.91
06_03_0198 - 17797574-17797717,17797995-17798099,17798509-177986... 28 1.2
04_04_1516 - 34122205-34122348,34122430-34122534,34122878-341230... 28 1.2
05_03_0446 + 14111667-14111906,14112011-14112418 27 1.6
02_01_0154 + 1078561-1078630,1078758-1078885,1079016-1079120,107... 27 1.6
01_06_1150 + 34910941-34911010,34911611-34911738,34912025-349121... 27 1.6
05_06_0251 + 26687833-26688120,26689288-26689365,26690499-266905... 27 2.8
02_05_1177 + 34739359-34740304,34740401-34740568,34740672-34741852 26 3.7
02_02_0339 + 9115297-9115366,9116280-9116407,9117537-9117641,911... 26 4.8
09_01_0041 + 746494-746691,747301-747495,750509-750631,751457-75... 25 6.4
07_03_0336 + 16911947-16912144,16912636-16912692,16912917-169136... 25 6.4
02_05_0473 + 29319824-29322511,29322659-29322820,29324133-293242... 25 6.4
01_05_0545 + 23109920-23110040,23113363-23113505,23113626-231140... 25 8.5
01_01_0560 + 4117203-4117458,4119359-4119609,4119691-4119860,412... 25 8.5
>10_02_0151 +
5895708-5895736,5896291-5896403,5897956-5898064,
5898580-5898658,5898747-5898863,5900001-5900138
Length = 194
Score = 70.5 bits (165), Expect = 2e-13
Identities = 32/50 (64%), Positives = 38/50 (76%)
Frame = +3
Query: 15 LSLSFTEPNPEDPLNKEAADELQSNRRLFEQHVQRAMRGGYVGTSYFERC 164
L+L FT+PN EDPLN EAA L+ N +LFE +V+RAM GGYVG YF RC
Sbjct: 144 LNLLFTQPNDEDPLNHEAAAVLRDNPKLFEANVKRAMAGGYVGQHYFPRC 193
>08_02_0468 -
17505905-17506002,17506295-17506424,17506662-17506778,
17506881-17506959,17507546-17507654,17507857-17507969,
17510510-17510570,17511562-17511742,17512903-17512960,
17514292-17514497,17514582-17514671,17514752-17514813,
17514911-17514979,17515330-17515334,17516282-17516454
Length = 516
Score = 63.3 bits (147), Expect = 3e-11
Identities = 29/49 (59%), Positives = 37/49 (75%)
Frame = +3
Query: 15 LSLSFTEPNPEDPLNKEAADELQSNRRLFEQHVQRAMRGGYVGTSYFER 161
L+L F++PN EDPLN EAA L+ N FE++VQRAM GGYVG ++F R
Sbjct: 436 LNLLFSQPNDEDPLNHEAAAVLRDNPEKFERNVQRAMAGGYVGETHFPR 484
>09_02_0429 +
9306862-9306970,9307834-9307942,9308538-9308616,
9308806-9308922,9309185-9309314,9311071-9311111
Length = 194
Score = 52.0 bits (119), Expect = 6e-08
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = +3
Query: 15 LSLSFTEPNPEDPLNKEAADELQSNRRLFEQHVQRAMRGGYVGTSYFERCL 167
L+L F +PN EDPLN +AA L+ + + F ++VQ AM GGYV +F R L
Sbjct: 133 LNLLFIQPNDEDPLNHDAAAVLRDDPQKFRRNVQTAMSGGYVDRVHFPRFL 183
>10_08_0197 +
15666873-15666916,15667098-15667177,15667490-15667604,
15667698-15667786,15667850-15667978,15670362-15670492
Length = 195
Score = 32.3 bits (70), Expect = 0.056
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 36 PNPEDPLNKEAADELQSNRRLFEQHVQ 116
PNP DPLN EAA + +R +EQ V+
Sbjct: 126 PNPSDPLNGEAAALMMRDRPAYEQKVK 152
>09_02_0285 +
6894899-6895114,6896197-6896422,6896889-6896992,
6897121-6897239,6897445-6897634
Length = 284
Score = 30.3 bits (65), Expect = 0.23
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 12 ILSLS--FTEPNPEDPLNKEAADELQSNRRLFEQ 107
+LS+S T+PNP+DPL E A +S R +E+
Sbjct: 103 LLSISSLLTDPNPDDPLVPEIAHVYKSQRPRYEE 136
>01_06_1289 -
36010924-36011001,36011441-36011518,36012321-36012421,
36012506-36012603,36016213-36016315,36016435-36016486
Length = 169
Score = 29.5 bits (63), Expect = 0.39
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 36 PNPEDPLNKEAADELQSNRRLFEQHVQRAMR 128
PN E P N EAA E + R F++ V+R +R
Sbjct: 133 PNDESPANIEAAKEWREKRDDFKKKVRRLVR 163
>12_01_0906 +
8799284-8799441,8800865-8801690,8801933-8802055,
8802144-8802210,8802611-8802714,8802798-8802900,
8803103-8803401,8804009-8804263,8805471-8805776,
8805866-8806194,8806829-8806916,8807027-8807164,
8807438-8807458
Length = 938
Score = 29.1 bits (62), Expect = 0.52
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 62 GSS*RAPKQQATFRTTRSESYARRLRRHILFRTMPQMKTC 181
G++ R+ ++ TF R + + RRLR + P+M+ C
Sbjct: 610 GAAERSDRRAMTFLRPRQQDFKRRLRSRMRHMQQPKMELC 649
>05_05_0110 +
22470869-22470920,22471044-22471146,22473261-22473358,
22473430-22473530,22474052-22474129,22474578-22474655
Length = 169
Score = 29.1 bits (62), Expect = 0.52
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 12 ILSLSFTEPNPEDPLNKEAADELQSNRRLFEQHVQRAMR 128
I+S+ + PN E P N EAA + + R F++ V+R +R
Sbjct: 126 IISM-LSSPNDESPANIEAAKDWREKRDDFKKKVRRIVR 163
>01_05_0633 +
23840427-23840562,23840699-23840768,23840846-23840951,
23841086-23841184,23841320-23841442,23841555-23842691
Length = 556
Score = 28.7 bits (61), Expect = 0.69
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 15 LSLSFTEPNPEDPLNKEAADELQSNRRLFE 104
+ L ++PNP+D L E + E + NR++F+
Sbjct: 120 IGLLLSDPNPDDGLMAEISREYKYNRQVFD 149
>07_01_0481 -
3621798-3621926,3622572-3622660,3622780-3622933,
3624104-3624111,3625522-3625547,3625757-3625881
Length = 176
Score = 28.3 bits (60), Expect = 0.91
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 33 EPNPEDPLNKEAADELQSNRRLFEQHVQ 116
+PNP P N EAA N+R + + V+
Sbjct: 139 DPNPNSPANSEAARLFSENKREYNRKVR 166
>05_01_0561 + 4905107-4905272,4905945-4906033,4906832-4906960
Length = 127
Score = 28.3 bits (60), Expect = 0.91
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 33 EPNPEDPLNKEAADELQSNRRLFEQHVQ 116
+PNP P N EAA N+R + + V+
Sbjct: 90 DPNPNSPANSEAARLFSENKREYNRKVR 117
>03_06_0260 -
32717142-32717270,32717743-32717831,32717950-32718039,
32721571-32721596,32721772-32721896
Length = 152
Score = 28.3 bits (60), Expect = 0.91
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 33 EPNPEDPLNKEAADELQSNRRLFEQHVQ 116
+PNP P N EAA N+R + + V+
Sbjct: 115 DPNPNSPANSEAARLFSENKREYNRKVR 142
>01_06_0129 -
26770543-26770720,26774592-26774719,26774829-26774933,
26775661-26775788,26777332-26777433,26778760-26778861,
26779777-26779852,26779971-26780059,26780177-26780230,
26780482-26780614,26780671-26780797,26781590-26781648
Length = 426
Score = 28.3 bits (60), Expect = 0.91
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 30 TEPNPEDPLNKEAADELQSNRRLFE 104
T+PNP+DPL E A +++R +E
Sbjct: 335 TDPNPDDPLVPEIAHMYKTDRHKYE 359
>06_03_0198 -
17797574-17797717,17797995-17798099,17798509-17798636,
17799444-17799513
Length = 148
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 30 TEPNPEDPLNKEAADELQSNRRLFE 104
T+PNP+DPL E A +++R +E
Sbjct: 111 TDPNPDDPLVPEIAHMYKTDRAKYE 135
>04_04_1516 -
34122205-34122348,34122430-34122534,34122878-34123005,
34124003-34124072
Length = 148
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 30 TEPNPEDPLNKEAADELQSNRRLFE 104
T+PNP+DPL E A +++R +E
Sbjct: 111 TDPNPDDPLVPEIAHMYKTDRAKYE 135
>05_03_0446 + 14111667-14111906,14112011-14112418
Length = 215
Score = 27.5 bits (58), Expect = 1.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 182 CRFSFEASFEIRCADVAASHSS 117
CR+ E S+ RC DV AS S+
Sbjct: 146 CRYDVEGSYAARCLDVFASASA 167
>02_01_0154 +
1078561-1078630,1078758-1078885,1079016-1079120,
1079228-1079371
Length = 148
Score = 27.5 bits (58), Expect = 1.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 30 TEPNPEDPLNKEAADELQSNRRLFE 104
T+PNP+DPL E A +++R +E
Sbjct: 111 TDPNPDDPLVPEIAHMCKTDRLRYE 135
>01_06_1150 +
34910941-34911010,34911611-34911738,34912025-34912129,
34912525-34912668
Length = 148
Score = 27.5 bits (58), Expect = 1.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 30 TEPNPEDPLNKEAADELQSNRRLFE 104
T+PNP+DPL E A +++R +E
Sbjct: 111 TDPNPDDPLVPEIAHMYKTDRPKYE 135
>05_06_0251 +
26687833-26688120,26689288-26689365,26690499-26690580,
26691155-26691195,26691973-26692143,26693586-26693813,
26694237-26694638
Length = 429
Score = 26.6 bits (56), Expect = 2.8
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +1
Query: 40 TLKIPSTRKQLTSSKATGDFSNNTFRELCEAATSAHL-ISN--DASNENL 180
TL+ R++ S K TGD N + C+ + HL I N D S E++
Sbjct: 108 TLERYEVREKKVSKKETGDPMKNPTSDSCQNCNACHLQICNYGDVSTESI 157
>02_05_1177 + 34739359-34740304,34740401-34740568,34740672-34741852
Length = 764
Score = 26.2 bits (55), Expect = 3.7
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -2
Query: 179 RFSFEASFEIRCADVAASHSSLNVLFEKSPVALELVSCFLVEGIFRV 39
R + + F++ C D A+ L + FE+ P +LVS L +G RV
Sbjct: 55 RCARDEGFQLNCDDSASPPRLLTLQFEQHP---QLVSLSLADGEARV 98
>02_02_0339 +
9115297-9115366,9116280-9116407,9117537-9117641,
9118165-9118259,9119472-9119538,9119685-9119720
Length = 166
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 30 TEPNPEDPLNKEAADELQSNR 92
T+PNP+DPL E A +++R
Sbjct: 111 TDPNPDDPLVPEIAHMYKTDR 131
>09_01_0041 +
746494-746691,747301-747495,750509-750631,751457-751636,
752772-753058,754343-754907
Length = 515
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 73 TSSKATGDFSNNTFRELCEAATSAHLISNDASNEN 177
+ +KA+ S+NT L EA + +L SND +N
Sbjct: 195 SQNKASAAASDNTGNALMEAESLINLKSNDLKEKN 229
>07_03_0336 +
16911947-16912144,16912636-16912692,16912917-16913696,
16914666-16914713,16914795-16916032,16916776-16916860,
16917323-16917379
Length = 820
Score = 25.4 bits (53), Expect = 6.4
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 55 STRKQLTSSKATGDFSNNTFRELCEAATSAHLISNDASNENLHT 186
S K +++ +TG F N+ R + +A T + +ND + ++ T
Sbjct: 689 SDAKSISAKTSTGSFDNSDARNIMKANTGI-VANNDIKDTDVQT 731
>02_05_0473 +
29319824-29322511,29322659-29322820,29324133-29324249,
29324360-29324469,29324504-29324540,29324696-29324862,
29325002-29325089,29325163-29325270
Length = 1158
Score = 25.4 bits (53), Expect = 6.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 84 SNRRLFEQHVQRAMRGGYVGTSYFERCL 167
+NRR+ E+HVQ Y+ S RC+
Sbjct: 507 TNRRVLERHVQEKHGAQYLQYSTLLRCI 534
>01_05_0545 +
23109920-23110040,23113363-23113505,23113626-23114009,
23114106-23114219,23114310-23114483,23114608-23114745,
23114884-23115021,23115094-23115155,23115268-23115541
Length = 515
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 158 FEIRCADVAASHSSLNVLFEKSPVALELVSCFLVEGIF 45
F+ D+A S SSL V F K + + ++ EGI+
Sbjct: 292 FDDADVDMAVSLSSLAVFFNKGEICVAGSRVYVQEGIY 329
>01_01_0560 +
4117203-4117458,4119359-4119609,4119691-4119860,
4120188-4120385,4120922-4121081
Length = 344
Score = 25.0 bits (52), Expect = 8.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 31 RNQTLKIPSTRKQLTSSKATGDFSNNTFRE 120
R + LK+ R+Q+ SS A + SN R+
Sbjct: 167 RTENLKVHENRRQMFSSSAANNASNPFVRQ 196
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,370,255
Number of Sequences: 37544
Number of extensions: 84897
Number of successful extensions: 286
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 286
length of database: 14,793,348
effective HSP length: 61
effective length of database: 12,503,164
effective search space used: 262566444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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