Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28n24
(374 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 166 6e-42
03_01_0547 + 4093196-4093657,4094267-4095148 166 6e-42
03_01_0544 + 4082528-4082989,4083585-4084466 166 6e-42
03_01_0543 + 4076981-4077442,4078145-4079026 166 6e-42
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 92 1e-19
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 92 1e-19
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 61 2e-10
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 44 3e-05
02_04_0462 + 23131433-23132836 41 4e-04
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 38 0.003
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 37 0.004
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 35 0.018
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 33 0.073
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 33 0.073
03_05_0511 + 25056018-25059107 32 0.17
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 31 0.22
04_01_0103 + 1082077-1082167,1083037-1085477 31 0.29
02_04_0148 - 20198407-20201424 31 0.29
02_04_0017 + 18937774-18937864,18938505-18940945 31 0.29
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 30 0.52
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 30 0.52
01_06_0662 + 30987187-30987277,30987825-30990214 30 0.68
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 28 2.7
09_04_0573 + 18636083-18636237,18637842-18638365,18638420-186385... 27 3.6
02_05_1118 + 34241819-34242217,34242350-34242522,34243499-342436... 27 4.8
11_06_0412 - 23235670-23236512,23236804-23237838 27 6.3
12_02_1174 - 26696869-26698191 26 8.4
04_04_0050 - 22360294-22361804,22362087-22362378,22363367-223634... 26 8.4
02_05_0564 + 30003817-30005778 26 8.4
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 166 bits (403), Expect = 6e-42
Identities = 77/87 (88%), Positives = 80/87 (91%)
Frame = +2
Query: 62 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 241
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 242 DKLKAERERGITIDIALWKFETSQVLC 322
DKLKAERERGITIDIALWKFET++ C
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYC 87
Score = 44.8 bits (101), Expect = 2e-05
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3
Query: 312 KYYVTIIDAPGHRDFIXNMIT 374
KYY T+IDAPGHRDFI NMIT
Sbjct: 84 KYYCTVIDAPGHRDFIKNMIT 104
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 166 bits (403), Expect = 6e-42
Identities = 77/87 (88%), Positives = 80/87 (91%)
Frame = +2
Query: 62 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 241
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 242 DKLKAERERGITIDIALWKFETSQVLC 322
DKLKAERERGITIDIALWKFET++ C
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYC 87
Score = 44.8 bits (101), Expect = 2e-05
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3
Query: 312 KYYVTIIDAPGHRDFIXNMIT 374
KYY T+IDAPGHRDFI NMIT
Sbjct: 84 KYYCTVIDAPGHRDFIKNMIT 104
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 166 bits (403), Expect = 6e-42
Identities = 77/87 (88%), Positives = 80/87 (91%)
Frame = +2
Query: 62 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 241
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 242 DKLKAERERGITIDIALWKFETSQVLC 322
DKLKAERERGITIDIALWKFET++ C
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYC 87
Score = 44.8 bits (101), Expect = 2e-05
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3
Query: 312 KYYVTIIDAPGHRDFIXNMIT 374
KYY T+IDAPGHRDFI NMIT
Sbjct: 84 KYYCTVIDAPGHRDFIKNMIT 104
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 166 bits (403), Expect = 6e-42
Identities = 77/87 (88%), Positives = 80/87 (91%)
Frame = +2
Query: 62 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 241
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 242 DKLKAERERGITIDIALWKFETSQVLC 322
DKLKAERERGITIDIALWKFET++ C
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYC 87
Score = 44.8 bits (101), Expect = 2e-05
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3
Query: 312 KYYVTIIDAPGHRDFIXNMIT 374
KYY T+IDAPGHRDFI NMIT
Sbjct: 84 KYYCTVIDAPGHRDFIKNMIT 104
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 92.3 bits (219), Expect = 1e-19
Identities = 39/79 (49%), Positives = 57/79 (72%)
Frame = +2
Query: 77 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 256
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 257 ERERGITIDIALWKFETSQ 313
ERERG+T+ +A+ ET +
Sbjct: 306 ERERGVTMTVAVAYLETKK 324
Score = 35.5 bits (78), Expect = 0.014
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +3
Query: 312 KYYVTIIDAPGHRDFIXNMIT 374
KY V ++D+PGH+DF+ NMI+
Sbjct: 324 KYRVVLLDSPGHKDFVPNMIS 344
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 92.3 bits (219), Expect = 1e-19
Identities = 39/79 (49%), Positives = 57/79 (72%)
Frame = +2
Query: 77 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 256
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 257 ERERGITIDIALWKFETSQ 313
ERERG+T+ +A+ ET +
Sbjct: 306 ERERGVTMTVAVAYLETKK 324
Score = 35.5 bits (78), Expect = 0.014
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +3
Query: 312 KYYVTIIDAPGHRDFIXNMIT 374
KY V ++D+PGH+DF+ NMI+
Sbjct: 324 KYRVVLLDSPGHKDFVPNMIS 344
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 61.3 bits (142), Expect = 2e-10
Identities = 26/66 (39%), Positives = 45/66 (68%)
Frame = +2
Query: 110 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIA 289
D+GKST G +++ G +D RTI+K+EKEA++ + S+ A+++D + ER +G T+++
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKTVEVG 63
Query: 290 LWKFET 307
FET
Sbjct: 64 RAHFET 69
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 44.4 bits (100), Expect = 3e-05
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +2
Query: 206 MGKGSFKYAWVLDKLKAERERGITIDIALWKFET 307
+GKGSF YAW +D+ ERERGIT+ + + F+T
Sbjct: 276 IGKGSFAYAWAMDESADERERGITMTVGVAYFDT 309
Score = 35.1 bits (77), Expect = 0.018
Identities = 11/20 (55%), Positives = 18/20 (90%)
Frame = +3
Query: 315 YYVTIIDAPGHRDFIXNMIT 374
Y+V ++D+PGH+DF+ NMI+
Sbjct: 312 YHVVLLDSPGHKDFVPNMIS 331
>02_04_0462 + 23131433-23132836
Length = 467
Score = 40.7 bits (91), Expect = 4e-04
Identities = 27/83 (32%), Positives = 39/83 (46%)
Frame = +2
Query: 59 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 238
K + K H+NI IGHVD GK+T T L + +K+++
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDE--------------- 107
Query: 239 LDKLKAERERGITIDIALWKFET 307
+D ER RGITI+ A ++ET
Sbjct: 108 IDAAPEERARGITINTATVEYET 130
Score = 28.3 bits (60), Expect = 2.1
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3
Query: 330 IDAPGHRDFIXNMIT 374
+D PGH D++ NMIT
Sbjct: 138 VDCPGHADYVKNMIT 152
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 37.5 bits (83), Expect = 0.003
Identities = 27/82 (32%), Positives = 38/82 (46%)
Frame = +2
Query: 68 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 247
+ K H+N+ IGHVD GK+T T + K E GK +DK
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTAAI---------------TKVLAEAGKAKAVAFDEIDK 107
Query: 248 LKAERERGITIDIALWKFETSQ 313
E+ RGITI A ++ET++
Sbjct: 108 APEEKARGITIATAHVEYETAK 129
Score = 30.3 bits (65), Expect = 0.52
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 309 AKYYVTIIDAPGHRDFIXNMIT 374
AK + +D PGH D++ NMIT
Sbjct: 128 AKRHYAHVDCPGHADYVKNMIT 149
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 37.1 bits (82), Expect = 0.004
Identities = 27/65 (41%), Positives = 32/65 (49%)
Frame = +2
Query: 86 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 265
N +I HVD GKST L+ G I K G G +Y LDKL+ ERE
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK-------------GHGQPQY---LDKLQVERE 102
Query: 266 RGITI 280
RGIT+
Sbjct: 103 RGITV 107
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 35.1 bits (77), Expect = 0.018
Identities = 25/68 (36%), Positives = 36/68 (52%)
Frame = +2
Query: 86 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 265
NI + H+DSGK+T T ++Y G R E E ++ G G+ +D + ERE
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTG----RIHEIHEVRGRD-GVGA-----KMDSMDLERE 119
Query: 266 RGITIDIA 289
+GITI A
Sbjct: 120 KGITIQSA 127
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 33.1 bits (72), Expect = 0.073
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = +2
Query: 80 HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAE 259
HI+ V++ H+D+GK+TTT ++Y G K I +F+ +G+ W ++ E
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTGRNYK--IGEFQ-------EGTVTMDW----MEQE 150
Query: 260 RERGITI 280
+ERGITI
Sbjct: 151 QERGITI 157
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 33.1 bits (72), Expect = 0.073
Identities = 26/67 (38%), Positives = 32/67 (47%)
Frame = +2
Query: 86 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 265
N +I H+D GKST L+ G + KR EM K F LD + ERE
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKR----------EM-KQQF-----LDNMDLERE 122
Query: 266 RGITIDI 286
RGITI +
Sbjct: 123 RGITIKL 129
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 31.9 bits (69), Expect = 0.17
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 86 NIVVIGHVDSGKSTTTGHLIYKCG 157
N ++ HVD GK+T HL+ CG
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG 35
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 31.5 bits (68), Expect = 0.22
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 86 NIVVIGHVDSGKSTTTGHLIYKCG 157
N+ VI HVD GK+T L+ +CG
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCG 89
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 31.1 bits (67), Expect = 0.29
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 35 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLIYKCG 157
+F + + ++ +K +I N+ VI HVD GKST T L+ G
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 31.1 bits (67), Expect = 0.29
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +2
Query: 86 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 265
N ++ HVD GK++ HLI G E+ E GS A V+D L+ E+
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS---------ERRVSERMAGS---ARVMDHLEEEQR 65
Query: 266 RGITIDIA 289
R IT+ A
Sbjct: 66 RAITMKSA 73
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 31.1 bits (67), Expect = 0.29
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 35 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLIYKCG 157
+F + + ++ +K +I N+ VI HVD GKST T L+ G
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 30.3 bits (65), Expect = 0.52
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 324 TIIDAPGHRDFIXNMIT 374
TI+DAPGH+ ++ NMI+
Sbjct: 34 TILDAPGHKSYVPNMIS 50
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 30.3 bits (65), Expect = 0.52
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 62 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 157
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 29.9 bits (64), Expect = 0.68
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 62 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 157
M K+ N+ V+ HVD GKST T L+ G
Sbjct: 13 MDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAG 44
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.9 bits (59), Expect = 2.7
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 74 KTHINIVVIGHVDSG 118
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>09_04_0573 +
18636083-18636237,18637842-18638365,18638420-18638529,
18638639-18638677,18638724-18638764,18638862-18638960,
18639405-18639576
Length = 379
Score = 27.5 bits (58), Expect = 3.6
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 269 GITIDIALWKFETSQVLCYH 328
G+T +ALWK+ SQ + YH
Sbjct: 90 GLTQGMALWKYSRSQAVGYH 109
>02_05_1118 +
34241819-34242217,34242350-34242522,34243499-34243660,
34243762-34243903,34244320-34244544,34244649-34244711,
34244817-34244891,34245198-34245404,34247274-34247465,
34247515-34247634
Length = 585
Score = 27.1 bits (57), Expect = 4.8
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +2
Query: 107 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 286
V S S T L+ + G D +++ ++A ++ + + V D + RE+G T+D+
Sbjct: 428 VFSKSSRETAKLVARWFGPDSDELKRMSEKALKLAQPEAVFDIVRDIHELSREQGPTVDV 487
Query: 287 AL 292
+
Sbjct: 488 TI 489
>11_06_0412 - 23235670-23236512,23236804-23237838
Length = 625
Score = 26.6 bits (56), Expect = 6.3
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 161 IDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID 283
+ K+T++ + A+EM KG + V DKL E ++ + D
Sbjct: 500 VSKKTLQDTVQCAREMLKGCNSFQSVYDKLMEEPQKALVPD 540
>12_02_1174 - 26696869-26698191
Length = 440
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2
Query: 167 KRTIEKFEKEAQEMGK 214
KR EK EKEAQEMG+
Sbjct: 371 KRKEEKREKEAQEMGR 386
>04_04_0050 -
22360294-22361804,22362087-22362378,22363367-22363420,
22363627-22363718,22364713-22364915,22365892-22366133,
22366205-22366330,22366800-22366907,22367394-22367457,
22367543-22367681,22367867-22368038,22368198-22368482
Length = 1095
Score = 26.2 bits (55), Expect = 8.4
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 312 WLVSNFQRAISIVIPRSRSAFSLSNTQAYLKDPLPISWASFSNF 181
+LV F+RA+S ++PR +AF + YL P W + +
Sbjct: 836 FLVPRFERALSRMLPRRDAAF--HHLGRYLLHPSNTVWGMVARY 877
>02_05_0564 + 30003817-30005778
Length = 653
Score = 26.2 bits (55), Expect = 8.4
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1
Query: 170 VCQYHHICRSSDQWWW 123
V Y H+C +WWW
Sbjct: 564 VLTYMHLCAEDWRWWW 579
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,660,830
Number of Sequences: 37544
Number of extensions: 180813
Number of successful extensions: 468
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 465
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 600754600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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